Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G37440.1 | Thale cress | cytosol | 87.14 | 73.17 |
| AT5G37760.1 | Thale cress | cytosol | 31.54 | 36.72 |
| AT5G62780.1 | Thale cress | cytosol | 26.14 | 30.43 |
| AT4G19580.1 | Thale cress | cytosol | 34.02 | 26.28 |
| AT4G19590.2 | Thale cress | nucleus | 36.51 | 23.53 |
| AT4G19570.1 | Thale cress | nucleus | 48.13 | 20.79 |
| AT5G37380.6 | Thale cress | nucleus | 31.54 | 17.63 |
| AT3G06778.1 | Thale cress | cytosol | 14.94 | 15.72 |
| AT5G53150.3 | Thale cress | cytosol | 39.0 | 12.45 |
| AT2G25560.1 | Thale cress | cytosol | 33.2 | 12.2 |
| AT2G05250.1 | Thale cress | cytosol | 32.37 | 11.05 |
| AT2G05230.1 | Thale cress | cytosol | 32.37 | 11.05 |
| AT2G35540.1 | Thale cress | nucleus | 24.07 | 9.83 |
| AT3G06340.4 | Thale cress | cytosol | 26.56 | 9.51 |
| AT5G50115.1 | Thale cress | cytosol | 17.84 | 8.87 |
| AT5G18750.1 | Thale cress | nucleus | 26.97 | 7.35 |
| AT3G04980.2 | Thale cress | nucleus | 34.02 | 6.93 |
| AT5G27240.1 | Thale cress | nucleus | 28.63 | 6.25 |
| AT3G04960.3 | Thale cress | cytosol | 12.86 | 5.12 |
| AT5G18740.1 | Thale cress | nucleus | 8.71 | 4.88 |
| AT3G05110.1 | Thale cress | nucleus | 6.64 | 4.3 |
| AT4G27980.2 | Thale cress | cytosol | 9.96 | 3.98 |
| AT5G35753.1 | Thale cress | cytosol | 4.98 | 2.8 |
| AT5G18730.1 | Thale cress | cytosol | 4.56 | 2.08 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 2.07 | 1.46 |
| PGSC0003DMT400094016 | Potato | nucleus | 0.41 | 0.34 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:833753 | ProteinID:AED94227.1 | ArrayExpress:AT5G37750 | EnsemblPlantsGene:AT5G37750 |
| RefSeq:AT5G37750 | TAIR:AT5G37750 | RefSeq:AT5G37750-TAIR-G | EnsemblPlants:AT5G37750.1 | TAIR:AT5G37750.1 | Unigene:At.30468 |
| InterPro:DnaJ_domain | UniProt:F4K8L8 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_198591.2 |
| PFAM:PF00226 | PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI0001505848 | : | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K8L8]
Coordinates
chr5:+:14995757..14997060
Molecular Weight (calculated)
27705.2 Da
IEP (calculated)
9.664
GRAVY (calculated)
-0.730
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFVTVENK PLPTDMEFTM EEATQIVEKK LSEKDYVGAM KFINLFPNLD GRWNTMIDVY ICGSNVGESD WYGVLGVDPL SDDETVKKHY KQLALLLHPD
101: KNKCYGAEGA FKLVSEAWCL LSDKVQRSSY DQRRKNSKQG KSSKPKATDS SKQRKSRTFW TMCRSCKTKG EFLRHWNLNK AILCPNCRQI FIATEITTKE
201: PNKTTKKASH QQQQWSVQDK APKTSLPRHL LLLPGNVHQF H
101: KNKCYGAEGA FKLVSEAWCL LSDKVQRSSY DQRRKNSKQG KSSKPKATDS SKQRKSRTFW TMCRSCKTKG EFLRHWNLNK AILCPNCRQI FIATEITTKE
201: PNKTTKKASH QQQQWSVQDK APKTSLPRHL LLLPGNVHQF H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.