Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G05250.1 | Thale cress | cytosol | 73.43 | 44.62 |
| AT2G05230.1 | Thale cress | cytosol | 73.43 | 44.62 |
| Os04t0388800-01 | Rice | nucleus | 33.8 | 24.25 |
| Zm00001d050565_P001 | Maize | cytosol | 31.93 | 21.27 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 29.14 | 20.76 |
| OQU85000 | Sorghum | cytosol | 34.03 | 20.05 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 33.8 | 19.78 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 33.8 | 19.78 |
| AT5G18740.1 | Thale cress | nucleus | 19.81 | 19.77 |
| Os02t0510000-01 | Rice | cytosol | 33.8 | 19.75 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 26.34 | 19.48 |
| Os03t0401200-01 | Rice | cytosol | 33.8 | 19.39 |
| Zm00001d003948_P001 | Maize | cytosol | 32.87 | 19.16 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 33.1 | 19.14 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 31.47 | 19.12 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 23.31 | 19.12 |
| EES10633 | Sorghum | cytosol | 32.63 | 19.05 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 33.1 | 19.03 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 32.87 | 19.0 |
| AT5G50115.1 | Thale cress | cytosol | 21.45 | 18.97 |
| EES10933 | Sorghum | cytosol | 31.93 | 18.92 |
| Zm00001d025584_P001 | Maize | cytosol | 32.17 | 18.83 |
| Zm00001d025585_P001 | Maize | cytosol | 32.17 | 18.83 |
| Zm00001d025238_P001 | Maize | cytosol | 31.93 | 18.66 |
| EES07899 | Sorghum | cytosol | 31.93 | 18.64 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 22.61 | 18.03 |
| AT3G05110.1 | Thale cress | nucleus | 15.62 | 18.01 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 31.7 | 17.87 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 31.47 | 17.74 |
| AT2G25560.1 | Thale cress | cytosol | 27.04 | 17.68 |
| GSMUA_Achr11P... | Banana | cytosol | 20.28 | 17.33 |
| GSMUA_Achr10P... | Banana | cytosol | 24.01 | 16.8 |
| Os01t0923800-01 | Rice | nucleus | 27.97 | 16.13 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 27.04 | 15.98 |
| AT5G18730.1 | Thale cress | cytosol | 19.58 | 15.91 |
| AT5G53150.3 | Thale cress | cytosol | 27.97 | 15.89 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 25.64 | 15.45 |
| Zm00001d011997_P001 | Maize | nucleus | 28.9 | 15.09 |
| KXG34016 | Sorghum | nucleus | 28.9 | 14.96 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 27.51 | 14.92 |
| AT3G04960.3 | Thale cress | cytosol | 19.58 | 13.88 |
| AT2G35540.1 | Thale cress | nucleus | 18.41 | 13.39 |
| AT3G06340.4 | Thale cress | cytosol | 20.75 | 13.22 |
| AT4G27980.2 | Thale cress | cytosol | 16.55 | 11.77 |
| AT5G18750.1 | Thale cress | nucleus | 21.21 | 10.29 |
| AT5G27240.1 | Thale cress | nucleus | 20.51 | 7.97 |
| AT3G04980.2 | Thale cress | nucleus | 20.51 | 7.44 |
| AT3G06778.1 | Thale cress | cytosol | 3.73 | 6.99 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 4.66 | 5.85 |
| AT5G37750.1 | Thale cress | cytosol | 2.8 | 4.98 |
| AT5G37440.1 | Thale cress | cytosol | 3.03 | 4.53 |
| AT5G62780.1 | Thale cress | cytosol | 2.1 | 4.35 |
| AT4G19570.1 | Thale cress | nucleus | 5.36 | 4.12 |
| AT5G37380.6 | Thale cress | nucleus | 3.5 | 3.48 |
| AT4G19590.2 | Thale cress | nucleus | 2.1 | 2.41 |
| AT5G37760.1 | Thale cress | cytosol | 0.93 | 1.93 |
| KRG89459 | Soybean | cytosol | 0.47 | 1.83 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 0.47 | 1.15 |
| Bra020957.1-P | Field mustard | cytosol | 0.47 | 0.97 |
| CDX76475 | Canola | cytosol | 0.47 | 0.97 |
| AT4G19580.1 | Thale cress | cytosol | 0.7 | 0.96 |
| Solyc03g019630.1.1 | Tomato | nucleus | 0.23 | 0.64 |
| PGSC0003DMT400039473 | Potato | nucleus | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT5G35753 | EnsemblPlants:AT5G35753.1 | EnsemblPlantsGene:AT5G35753 | EntrezGene:833553 | GO:GO:0005575 | GO:GO:0008150 |
| InterPro:DUF3444 | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF2 | PFAM:PF11926 | PO:PO:0000293 | ProteinID:AED94015.2 |
| RefSeq:AT5G35753 | RefSeq:AT5G35753-TAIR-G | RefSeq:NP_001318677.1 | SEG:seg | TAIR:AT5G35753 | TAIR:AT5G35753.1 |
| UniParc:UPI000848CF4E | UniProt:F4K1E8 | MapMan:35.2 | : | : | : |
Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G35753]
Coordinates
chr5:-:13922418..13925454
Molecular Weight (calculated)
48672.4 Da
IEP (calculated)
7.798
GRAVY (calculated)
-0.647
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTNSTYFLG QYPAHGYEYV TNESYDWSSY VGTSPGNLES NRMSSASNGY PYKLNNGVVL IKASRPEKKR NVGLGSSGNG FVENITKSNP ESKATNLDAK
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.