Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G315600.1 | Wheat | cytosol | 96.19 | 96.19 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 95.01 | 94.76 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 84.89 | 90.73 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 75.43 | 77.36 |
| Os03t0401200-01 | Rice | cytosol | 71.75 | 72.99 |
| EES07899 | Sorghum | cytosol | 66.62 | 68.98 |
| Zm00001d025584_P001 | Maize | cytosol | 64.52 | 66.98 |
| Zm00001d025585_P001 | Maize | cytosol | 64.39 | 66.85 |
| EES10933 | Sorghum | cytosol | 60.58 | 63.67 |
| Bra020958.1-P | Field mustard | cytosol | 7.23 | 53.92 |
| CDX76476 | Canola | cytosol | 7.23 | 53.92 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 17.08 | 53.72 |
| PGSC0003DMT400039473 | Potato | nucleus | 9.72 | 50.0 |
| Bra031906.1-P | Field mustard | cytosol | 5.91 | 48.91 |
| CDY31307 | Canola | cytosol | 5.91 | 48.91 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 16.03 | 48.41 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 11.04 | 48.28 |
| Solyc03g019630.1.1 | Tomato | nucleus | 9.72 | 47.44 |
| Bra020957.1-P | Field mustard | cytosol | 12.62 | 46.6 |
| CDX99361 | Canola | cytosol | 8.94 | 46.58 |
| CDX76475 | Canola | cytosol | 12.48 | 46.12 |
| KRH64496 | Soybean | nucleus | 41.52 | 45.66 |
| Solyc03g007280.2.1 | Tomato | cytosol | 11.7 | 45.64 |
| KRH53452 | Soybean | cytosol | 41.39 | 45.52 |
| CDY27107 | Canola | nucleus | 20.24 | 42.08 |
| CDY49460 | Canola | nucleus | 36.01 | 42.02 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 45.07 | 41.98 |
| CDY19683 | Canola | cytosol | 38.11 | 41.85 |
| PGSC0003DMT400023514 | Potato | cytosol | 40.34 | 41.77 |
| Bra003079.1-P | Field mustard | cytosol | 38.9 | 41.75 |
| KRG89459 | Soybean | cytosol | 5.91 | 41.28 |
| Bra038959.1-P | Field mustard | nucleus | 20.63 | 40.78 |
| CDY12382 | Canola | nucleus | 19.58 | 40.71 |
| KRH09248 | Soybean | nucleus | 41.52 | 40.56 |
| KRH16532 | Soybean | cytosol | 41.0 | 40.52 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 38.5 | 39.97 |
| KRH18160 | Soybean | nucleus | 40.21 | 39.69 |
| KRH14137 | Soybean | nucleus | 36.79 | 39.6 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 36.01 | 39.48 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 38.5 | 39.43 |
| KRH73997 | Soybean | nucleus | 36.27 | 39.15 |
| KRH38748 | Soybean | nucleus | 41.66 | 39.04 |
| Bra034258.1-P | Field mustard | cytosol | 31.67 | 38.93 |
| PGSC0003DMT400059130 | Potato | cytosol | 39.68 | 38.82 |
| CDX99362 | Canola | nucleus | 14.45 | 38.6 |
| AT5G53150.3 | Thale cress | cytosol | 38.24 | 38.54 |
| AT5G37380.6 | Thale cress | nucleus | 21.81 | 38.52 |
| CDY35353 | Canola | cytosol | 31.27 | 38.2 |
| Solyc01g044270.2.1 | Tomato | cytosol | 39.03 | 38.17 |
| CDY09330 | Canola | cytosol | 11.17 | 37.78 |
| CDX76994 | Canola | nucleus | 28.78 | 37.63 |
| CDY60893 | Canola | cytosol | 7.75 | 37.11 |
| CDY60894 | Canola | cytosol | 7.75 | 37.11 |
| CDX76474 | Canola | cytosol | 11.7 | 37.08 |
| CDX78942 | Canola | cytosol | 14.72 | 36.6 |
| CDX76473 | Canola | cytosol | 11.56 | 36.36 |
| CDY60890 | Canola | cytosol | 11.56 | 36.36 |
| AT2G25560.1 | Thale cress | cytosol | 30.49 | 35.37 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 40.34 | 34.65 |
| CDX76752 | Canola | nucleus | 27.99 | 34.41 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 35.61 | 34.26 |
| PGSC0003DMT400039476 | Potato | nucleus | 36.14 | 34.16 |
| Bra007790.1-P | Field mustard | nucleus | 26.54 | 34.12 |
| CDY11521 | Canola | nucleus | 26.54 | 34.12 |
| CDX99360 | Canola | cytosol | 14.72 | 33.63 |
| PGSC0003DMT400048481 | Potato | cytosol | 34.17 | 33.21 |
| Bra020955.1-P | Field mustard | cytosol | 12.22 | 32.98 |
| Solyc05g040050.1.1 | Tomato | nucleus | 33.9 | 32.95 |
| Bra013179.1-P | Field mustard | nucleus | 29.96 | 32.9 |
| CDX93081 | Canola | nucleus | 29.96 | 32.9 |
| CDY15046 | Canola | nucleus | 29.83 | 32.9 |
| PGSC0003DMT400015678 | Potato | nucleus | 34.03 | 32.87 |
| AT2G05230.1 | Thale cress | cytosol | 30.49 | 32.86 |
| AT2G05250.1 | Thale cress | cytosol | 30.49 | 32.86 |
| CDY47298 | Canola | cytosol | 25.1 | 32.71 |
| Bra035378.1-P | Field mustard | cytosol | 29.57 | 32.7 |
| AT5G50115.1 | Thale cress | cytosol | 20.63 | 32.37 |
| CDX74632 | Canola | cytosol | 24.97 | 32.37 |
| KRH54176 | Soybean | nucleus | 33.64 | 32.28 |
| Solyc07g047690.1.1 | Tomato | nucleus | 33.38 | 32.23 |
| KRH63773 | Soybean | nucleus | 34.43 | 32.23 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.2 | 31.82 |
| AT5G35753.1 | Thale cress | cytosol | 17.87 | 31.7 |
| PGSC0003DMT400085016 | Potato | cytosol | 5.39 | 31.54 |
| Bra020956.1-P | Field mustard | nucleus | 14.06 | 30.66 |
| Solyc03g019640.1.1 | Tomato | nucleus | 36.53 | 29.92 |
| CDY12569 | Canola | cytosol | 13.8 | 29.33 |
| Bra040300.1-P | Field mustard | cytosol | 14.19 | 29.27 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 8.15 | 28.44 |
| PGSC0003DMT400092645 | Potato | cytosol | 4.73 | 27.91 |
| AT4G19580.1 | Thale cress | cytosol | 11.43 | 27.88 |
| TraesCS7A01G033400.1 | Wheat | plastid | 16.03 | 27.05 |
| TraesCS4A01G456000.1 | Wheat | plastid | 15.64 | 26.39 |
| Bra013403.1-P | Field mustard | nucleus | 18.13 | 25.46 |
| Bra013404.1-P | Field mustard | nucleus | 14.85 | 25.34 |
| CDX78941 | Canola | nucleus | 18.13 | 25.0 |
| PGSC0003DMT400092668 | Potato | cytosol | 4.86 | 25.0 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 8.41 | 22.46 |
| AT5G62780.1 | Thale cress | cytosol | 6.04 | 22.22 |
| Solyc01g057650.1.1 | Tomato | cytosol | 4.99 | 22.22 |
| AT4G19570.1 | Thale cress | nucleus | 15.9 | 21.68 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 24.57 | 19.16 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 6.83 | 19.12 |
| Solyc07g039220.1.1 | Tomato | cytosol | 8.41 | 18.13 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 24.18 | 17.99 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 22.73 | 16.73 |
| Solyc01g057750.1.1 | Tomato | cytosol | 13.4 | 16.45 |
| PGSC0003DMT400080343 | Potato | cytosol | 13.27 | 16.37 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 25.49 | 16.3 |
| PGSC0003DMT400096427 | Potato | cytosol | 13.01 | 16.1 |
| TraesCS3A01G441600.4 | Wheat | cytosol | 14.85 | 15.01 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 14.45 | 13.66 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 11.56 | 13.13 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 15.37 | 12.73 |
| Bra002184.1-P | Field mustard | cytosol | 0.26 | 0.76 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G493100.1 | EnsemblPlantsGene:TraesCS5A01G493100 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 |
| TIGR:cd06257 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:662339879..662342164
Molecular Weight (calculated)
84697.5 Da
IEP (calculated)
8.959
GRAVY (calculated)
-0.707
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNKDEALR AKEIAERKFQ SRDLQGAKKF ALKAKALFPD LEGIVQMITT LDVYLTSEVK IAGGKDWYSI LSVDMSADDE TLKKQYRKLV LQLHPDKNKS
101: VGAEGAFQMV QEAWTVLSDK TKRALFDQKR KLIAMQQKTS QSNKTSAANG FEHFAAKAPA SKASANKEKT GSATSAVRQR PPPPPPPQRP SPPPPPQRPL
201: PRHQAAAPAP PPAAQPTFWT SCNRCKMNFE YLREYLNRNL LCPSCREPFI AKEVPMPPPE VVQAVRDSNI RGATHDASTG RKFQWGLFSR TAGPASATAS
301: SAAGAQAANM VHQTYEKVKR EREEAQAAAR REEALQRKHN PLKRKANVSE NVNHGMGDVA SGKKMKTVGN DAGVGSSSIL SGPWANYVGT PGGTIPFSSN
401: SGAFEFQGAN GVIPNWRPRP STRISVTRTF SKKDIRSILI DKMKSNLREN LKEIRSKPLQ VTVNGKASEK HVVNEHVEGN ETLASDDSTA NKDVSADPEE
501: NGSSNSADAE NEDDSTFSYT VPDPDFHDFD KDRTEESFQS DQIWASYDDE DGMPRYYAYI QKVISLTPFK VKISYLASRT NSEFGPLNWA SSGFIKTCGD
601: FRIGKYETVD IINMFSHQIK WEKGPRGVVK IYPRKGDIWA LYRNWSPDWN GDTPDNVLHV YDLVEVQDDY DEDNGISVIP LIKLTGFRTV FQHHQDRDAI
701: KRIPKGEMFR FSHQVPFYRM SGEEAPNVPK GSFEVDPAAI SKELLQGITE TVKEAEGTSK C
101: VGAEGAFQMV QEAWTVLSDK TKRALFDQKR KLIAMQQKTS QSNKTSAANG FEHFAAKAPA SKASANKEKT GSATSAVRQR PPPPPPPQRP SPPPPPQRPL
201: PRHQAAAPAP PPAAQPTFWT SCNRCKMNFE YLREYLNRNL LCPSCREPFI AKEVPMPPPE VVQAVRDSNI RGATHDASTG RKFQWGLFSR TAGPASATAS
301: SAAGAQAANM VHQTYEKVKR EREEAQAAAR REEALQRKHN PLKRKANVSE NVNHGMGDVA SGKKMKTVGN DAGVGSSSIL SGPWANYVGT PGGTIPFSSN
401: SGAFEFQGAN GVIPNWRPRP STRISVTRTF SKKDIRSILI DKMKSNLREN LKEIRSKPLQ VTVNGKASEK HVVNEHVEGN ETLASDDSTA NKDVSADPEE
501: NGSSNSADAE NEDDSTFSYT VPDPDFHDFD KDRTEESFQS DQIWASYDDE DGMPRYYAYI QKVISLTPFK VKISYLASRT NSEFGPLNWA SSGFIKTCGD
601: FRIGKYETVD IINMFSHQIK WEKGPRGVVK IYPRKGDIWA LYRNWSPDWN GDTPDNVLHV YDLVEVQDDY DEDNGISVIP LIKLTGFRTV FQHHQDRDAI
701: KRIPKGEMFR FSHQVPFYRM SGEEAPNVPK GSFEVDPAAI SKELLQGITE TVKEAEGTSK C
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.