Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11521 | Canola | nucleus | 83.2 | 86.99 |
| CDY35353 | Canola | cytosol | 56.54 | 56.18 |
| CDX76994 | Canola | nucleus | 51.86 | 55.15 |
| AT2G25560.1 | Thale cress | cytosol | 56.22 | 53.05 |
| CDX76476 | Canola | cytosol | 7.75 | 47.06 |
| CDY31307 | Canola | cytosol | 6.79 | 45.65 |
| CDX99361 | Canola | cytosol | 10.34 | 43.84 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 12.12 | 43.1 |
| CDX76475 | Canola | cytosol | 13.73 | 41.26 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 33.76 | 34.72 |
| CDY60893 | Canola | cytosol | 8.72 | 33.96 |
| CDY60894 | Canola | cytosol | 8.72 | 33.96 |
| CDY09330 | Canola | cytosol | 12.12 | 33.33 |
| CDX99362 | Canola | nucleus | 15.02 | 32.63 |
| CDX76473 | Canola | cytosol | 12.44 | 31.82 |
| CDX76474 | Canola | cytosol | 12.12 | 31.25 |
| CDY12382 | Canola | nucleus | 18.42 | 31.15 |
| CDY27107 | Canola | nucleus | 18.42 | 31.15 |
| GSMUA_Achr10P... | Banana | cytosol | 30.37 | 30.67 |
| CDX74107 | Canola | cytosol | 13.25 | 30.6 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 26.33 | 30.3 |
| CDY60890 | Canola | cytosol | 11.79 | 30.17 |
| Zm00001d025584_P001 | Maize | cytosol | 35.22 | 29.74 |
| Zm00001d025585_P001 | Maize | cytosol | 35.06 | 29.6 |
| EES10933 | Sorghum | cytosol | 34.57 | 29.56 |
| GSMUA_Achr11P... | Banana | cytosol | 23.91 | 29.48 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 34.9 | 29.47 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 34.73 | 29.33 |
| Os03t0401200-01 | Rice | cytosol | 35.38 | 29.28 |
| EES07899 | Sorghum | cytosol | 34.73 | 29.25 |
| EES10633 | Sorghum | cytosol | 34.57 | 29.12 |
| Os02t0510000-01 | Rice | cytosol | 34.25 | 28.88 |
| Zm00001d025238_P001 | Maize | cytosol | 34.25 | 28.88 |
| CDY19683 | Canola | cytosol | 32.31 | 28.86 |
| OQU85000 | Sorghum | cytosol | 33.93 | 28.85 |
| Zm00001d003948_P001 | Maize | cytosol | 34.25 | 28.8 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 32.63 | 28.61 |
| CDY15046 | Canola | nucleus | 31.83 | 28.55 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 26.66 | 28.45 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 34.09 | 28.44 |
| CDX78942 | Canola | cytosol | 14.05 | 28.43 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 33.93 | 28.3 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 34.09 | 28.28 |
| CDX93081 | Canola | nucleus | 31.66 | 28.28 |
| CDY08035 | Canola | cytosol | 4.52 | 28.28 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 23.75 | 28.11 |
| CDY49460 | Canola | nucleus | 29.56 | 28.07 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 34.41 | 27.99 |
| Zm00001d050565_P001 | Maize | cytosol | 28.76 | 27.64 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.69 | 27.27 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 19.39 | 27.27 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 33.44 | 27.2 |
| CDX99360 | Canola | cytosol | 14.38 | 26.73 |
| Os01t0923800-01 | Rice | nucleus | 31.99 | 26.61 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 30.53 | 26.54 |
| CDY47298 | Canola | cytosol | 24.39 | 25.86 |
| CDX74632 | Canola | cytosol | 24.39 | 25.72 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 29.89 | 25.48 |
| CDY40464 | Canola | nucleus | 19.55 | 25.21 |
| CDY12569 | Canola | cytosol | 14.38 | 24.86 |
| CDX74108 | Canola | cytosol | 8.08 | 24.75 |
| Os04t0388800-01 | Rice | nucleus | 23.75 | 24.58 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 30.86 | 24.15 |
| CDX88917 | Canola | nucleus | 12.92 | 24.1 |
| CDY32121 | Canola | nucleus | 18.09 | 24.09 |
| CDY08056 | Canola | nucleus | 24.23 | 23.89 |
| CDY24701 | Canola | nucleus | 22.13 | 23.26 |
| Zm00001d011997_P001 | Maize | nucleus | 29.89 | 22.51 |
| KXG34016 | Sorghum | nucleus | 30.05 | 22.44 |
| CDX86172 | Canola | nucleus | 22.78 | 22.42 |
| CDY05255 | Canola | nucleus | 23.26 | 21.75 |
| CDY34931 | Canola | cytosol | 7.75 | 21.33 |
| CDY13919 | Canola | nucleus | 15.99 | 20.97 |
| CDX80667 | Canola | nucleus | 22.46 | 20.9 |
| CDX74082 | Canola | cytosol | 7.59 | 20.8 |
| CDX78941 | Canola | nucleus | 17.93 | 20.11 |
| CDY41935 | Canola | cytosol | 16.48 | 19.17 |
| CDY27796 | Canola | cytosol | 15.83 | 18.53 |
| CDY51818 | Canola | nucleus | 11.79 | 18.43 |
| CDX92586 | Canola | nucleus | 10.18 | 18.0 |
| CDX92582 | Canola | nucleus | 24.07 | 17.7 |
| CDY19714 | Canola | nucleus | 26.82 | 17.26 |
| CDX99992 | Canola | cytosol | 26.01 | 17.11 |
| CDX92856 | Canola | nucleus | 12.12 | 15.96 |
| CDY27809 | Canola | nucleus | 25.52 | 15.93 |
| CDY27811 | Canola | nucleus | 12.12 | 15.66 |
| CDX88918 | Canola | cytosol | 13.41 | 15.6 |
| CDX70843 | Canola | extracellular, golgi | 13.57 | 15.53 |
| CDY29872 | Canola | cytosol | 11.15 | 15.47 |
| CDY13918 | Canola | nucleus | 14.22 | 15.36 |
| CDX70837 | Canola | mitochondrion | 11.31 | 13.89 |
| CDY41919 | Canola | nucleus, plastid | 25.69 | 13.35 |
| CDX88924 | Canola | plastid | 14.7 | 12.87 |
| CDX70840 | Canola | nucleus | 12.12 | 12.84 |
| CDX88920 | Canola | nucleus | 11.79 | 12.41 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 7.43 | 11.03 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 13.73 | 9.95 |
| CDY41917 | Canola | nucleus | 15.19 | 9.83 |
| CDX70841 | Canola | nucleus | 14.86 | 6.36 |
| CDX88919 | Canola | cytosol | 15.19 | 5.95 |
| CDX92583 | Canola | mitochondrion, plastid | 3.07 | 5.48 |
| CDX92584 | Canola | mitochondrion | 1.62 | 2.87 |
Protein Annotations
| EnsemblPlants:CDX76752 | EnsemblPlantsGene:GSBRNA2T00127244001 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | PFAM:PF00226 | PFAM:PF11926 |
| PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDX76752 | ProteinID:CDX76752.1 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EDB733 | MapMan:35.2 | : | : | : |
Description
BnaC08g33380D
Coordinates
chrLK031808:-:842812..844671
Molecular Weight (calculated)
67951.9 Da
IEP (calculated)
6.905
GRAVY (calculated)
-0.446
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFYNKEEAN RAREAAVNKF IANDFAGARR FALKALSLDP EIVGITQMVA TFAMHLAAQH TINGEVDHYG VLGVHPQADD ETVKKRYKKL VVILHPDKNK
101: SIGAGEAFKL VSKACEVLSD KEKRAEYDSK RNFVVCEGRG ASSSSKKGAA KGKTPKRGVK QASDDASTSS APPAPPAPAP PAPPALDVAT TSDGTFWTVC
201: SSCTRRYEYH RIYLNQNLRC SHCRKPFIAV ETAPPHSSIR KTFVEQQFDS LEWSAVTTTG TITAAHDSQA VPRESTKRSA ADSPSTNPPK RRKEAVVEEN
301: AAAAASNIAS SSSAPPKSNT GRDFSEGELN NVLVKKSKPT IVSNLQDLIA IDPETEDVNM ANASHCMDPV EDDTTRTDKD LPALGALTIN VPEEPDVCDF
401: VKNRTQKSFS DNEIWASYDI LAGLPRVYYM IDKVLSLDPF KLCITRLTTS RTNSGPTSSS WLGSQRTCGV FRAGDSHICF SPYSFSHKME AVKGDQGEFL
501: IYPRTGEVWA MYRNWPSEWN YLEGNRADKY DVVEVVEGYT EEYGVRVVPL MKVAGFSSVF RHYLGPKEII SFSKVELAKF SHQIPSYLLT GKDAADELGG
601: CRQLDPASTP LHLLEIVDG
101: SIGAGEAFKL VSKACEVLSD KEKRAEYDSK RNFVVCEGRG ASSSSKKGAA KGKTPKRGVK QASDDASTSS APPAPPAPAP PAPPALDVAT TSDGTFWTVC
201: SSCTRRYEYH RIYLNQNLRC SHCRKPFIAV ETAPPHSSIR KTFVEQQFDS LEWSAVTTTG TITAAHDSQA VPRESTKRSA ADSPSTNPPK RRKEAVVEEN
301: AAAAASNIAS SSSAPPKSNT GRDFSEGELN NVLVKKSKPT IVSNLQDLIA IDPETEDVNM ANASHCMDPV EDDTTRTDKD LPALGALTIN VPEEPDVCDF
401: VKNRTQKSFS DNEIWASYDI LAGLPRVYYM IDKVLSLDPF KLCITRLTTS RTNSGPTSSS WLGSQRTCGV FRAGDSHICF SPYSFSHKME AVKGDQGEFL
501: IYPRTGEVWA MYRNWPSEWN YLEGNRADKY DVVEVVEGYT EEYGVRVVPL MKVAGFSSVF RHYLGPKEII SFSKVELAKF SHQIPSYLLT GKDAADELGG
601: CRQLDPASTP LHLLEIVDG
001: MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI IYGDVDHYGV LGLNPEADDE IVRKRYRKLA VMLHPDRNKS
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
Arabidopsis Description
At2g25560/F13B15.22 [Source:UniProtKB/TrEMBL;Acc:Q9SLA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.