CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27809	Canola	nucleus	72.88	87.5
AT3G04980.2	Thale cress	nucleus	59.11	59.51
Bra039474.1-P	Field mustard	nucleus	67.93	53.01
CDY31307	Canola	cytosol	3.78	48.91
CDX76476	Canola	cytosol	4.11	48.04
CDX80667	Canola	nucleus	25.44	45.56
CDX86172	Canola	nucleus	24.01	45.47
CDY19714	Canola	nucleus	34.84	43.14
CDX99992	Canola	cytosol	33.67	42.61
PGSC0003DMT400057888	Potato	cytosol	6.88	41.41
CDX99361	Canola	cytosol	4.95	40.41
CDY60893	Canola	cytosol	5.29	39.62
CDY60894	Canola	cytosol	5.29	39.62
PGSC0003DMT400089411	Potato	cytosol	7.3	38.84
CDY60891	Canola	cytosol, mitochondrion, nucleus	5.63	38.51
CDX76475	Canola	cytosol	6.63	38.35
CDX74107	Canola	cytosol	8.23	36.57
CDY08035	Canola	cytosol	2.77	33.33
CDY60010	Canola	cytosol, mitochondrion, nucleus	6.13	33.18
GSMUA_Achr11P...	Banana	nucleus	18.05	32.87
GSMUA_Achr2P02410_001	Banana	cytosol	20.24	31.14
CDY09330	Canola	cytosol	5.88	31.11
CDX88917	Canola	nucleus	8.65	31.02
CDX76473	Canola	cytosol	6.3	30.99
CDX74108	Canola	cytosol	5.21	30.69
CDX99362	Canola	nucleus	7.3	30.53
CDX76474	Canola	cytosol	6.13	30.42
CDY13919	Canola	nucleus	11.92	30.08
GSMUA_Achr5P00460_001	Banana	cytosol	18.3	29.99
CDY60890	Canola	cytosol	6.05	29.75
CDY24701	Canola	nucleus	14.44	29.2
CDX92582	Canola	nucleus	20.49	28.98
Zm00001d040846_P001	Maize	cytosol	22.75	28.95
CDY08056	Canola	nucleus	15.11	28.66
Solyc01g098250.2.1	Tomato	nucleus	23.68	28.4
TraesCS6A01G167100.1	Wheat	cytosol	23.26	28.38
TraesCS6D01G155600.1	Wheat	cytosol	23.17	28.28
CDX78942	Canola	cytosol	7.22	28.1
TraesCS6B01G194500.1	Wheat	cytosol	23.01	28.07
EES00793	Sorghum	cytosol	22.67	27.64
CDY12382	Canola	nucleus	8.48	27.6
CDY27107	Canola	nucleus	8.48	27.6
HORVU6Hr1G033850.1	Barley	cytosol	22.59	27.59
PGSC0003DMT400038431	Potato	nucleus	18.22	27.57
TraesCS3A01G213800.3	Wheat	nucleus	23.59	27.47
TraesCS4B01G101500.1	Wheat	cytosol	20.65	27.46
TraesCS3D01G215900.1	Wheat	nucleus	23.59	27.44
Os01t0375100-01	Rice	nucleus	23.17	27.38
Solyc08g029220.1.1	Tomato	nucleus	18.14	27.38
CDY13918	Canola	nucleus	13.1	27.23
VIT_14s0030g00640.t01	Wine grape	nucleus	26.7	27.2
CDY05255	Canola	nucleus	15.11	27.19
TraesCS3B01G244000.4	Wheat	nucleus	23.51	27.08
CDX70837	Canola	mitochondrion	11.42	26.98
PGSC0003DMT400057904	Potato	nucleus	24.43	26.92
CDY35353	Canola	cytosol	14.02	26.81
CDX99360	Canola	cytosol	7.47	26.73
CDY34931	Canola	cytosol	5.04	26.67
CDX70843	Canola	extracellular, golgi	12.09	26.62
Zm00001d008412_P001	Maize	cytosol	22.75	26.59
CDY12569	Canola	cytosol	7.98	26.54
KXG32106	Sorghum	cytosol	22.5	26.51
Os06t0535300-01	Rice	nucleus	22.5	26.33
HORVU4Hr1G043860.4	Barley	cytosol	20.82	26.13
Zm00001d008413_P001	Maize	cytosol	22.33	26.13
EER88793	Sorghum	cytosol	20.65	25.95
CDX76994	Canola	nucleus	12.68	25.95
PGSC0003DMT400057894	Potato	cytosol	8.4	25.77
CDX76752	Canola	nucleus	13.35	25.69
Os11t0578100-00	Rice	cytosol	22.59	25.55
CDY11521	Canola	nucleus	12.68	25.51
CDX88918	Canola	cytosol	11.34	25.38
OQU83710	Sorghum	cytosol	20.74	25.36
TraesCS2A01G084900.1	Wheat	nucleus	22.0	25.34
Solyc10g007630.1.1	Tomato	cytosol	10.24	25.1
Os11t0574200-00	Rice	cytosol	6.88	25.08
HORVU7Hr1G050080.1	Barley	nucleus	21.75	25.05
CDY40464	Canola	nucleus	10.08	25.0
Solyc01g098340.2.1	Tomato	cytosol	16.79	25.0
CDY32121	Canola	nucleus	9.74	24.95
KXG28768	Sorghum	nucleus	20.4	24.92
PGSC0003DMT400054841	Potato	cytosol	10.33	24.9
CDX92586	Canola	nucleus	7.3	24.86
HORVU3Hr1G051850.2	Barley	nucleus	23.43	24.67
CDX88920	Canola	nucleus	12.17	24.66
CDX70840	Canola	nucleus	12.09	24.66
CDX74082	Canola	cytosol	4.62	24.34
CDY19683	Canola	cytosol	14.11	24.24
EES09993	Sorghum	nucleus	22.25	24.03
PGSC0003DMT400057893	Potato	cytosol	9.74	23.97
CDY49460	Canola	nucleus	13.01	23.77
PGSC0003DMT400057887	Potato	cytosol	16.79	23.75
TraesCS2B01G099600.2	Wheat	nucleus	21.75	23.61
TraesCS2D01G082800.1	Wheat	nucleus	21.66	23.48
CDX92856	Canola	nucleus	9.24	23.4
CDY27796	Canola	cytosol	10.24	23.06
Zm00001d019461_P002	Maize	cytosol	21.58	23.03
TraesCS4A01G214500.1	Wheat	nucleus	12.93	22.99
CDY41935	Canola	cytosol	10.24	22.93
Solyc01g098310.1.1	Tomato	cytosol	8.73	22.81
EER98396	Sorghum	nucleus	21.83	22.79
EES08665	Sorghum	nucleus	12.85	22.53
TraesCS1B01G054900.1	Wheat	nucleus	22.42	22.4
TraesCS1D01G042900.1	Wheat	nucleus	22.25	22.23
Os11t0573800-00	Rice	nucleus	17.13	22.22
TraesCS1A01G042500.1	Wheat	nucleus	21.91	21.93
CDX88924	Canola	plastid	13.01	21.92
CDY29872	Canola	cytosol	8.14	21.75
HORVU1Hr1G008940.2	Barley	nucleus	21.49	21.37
CDX93081	Canola	nucleus	12.43	21.36
CDY15046	Canola	nucleus	12.34	21.3
OQU83709	Sorghum	cytosol	20.57	21.08
CDY27811	Canola	nucleus	8.4	20.88
Zm00001d052947_P001	Maize	plastid	15.03	20.69
TraesCS2D01G077700.1	Wheat	cytosol	14.61	20.16
TraesCS2B01G095100.1	Wheat	cytosol	14.44	19.91
CDY47298	Canola	cytosol	9.74	19.86
HORVU2Hr1G084660.1	Barley	cytosol	14.44	19.77
CDX92583	Canola	mitochondrion, plastid	5.71	19.6
CDX74632	Canola	cytosol	9.66	19.59
HORVU2Hr1G013270.2	Barley	cytosol	14.11	19.33
TraesCS2B01G366100.1	Wheat	cytosol	14.78	19.15
TraesCS2A01G347700.1	Wheat	mitochondrion	14.69	19.04
Solyc01g098330.1.1	Tomato	nucleus	6.55	19.02
CDY51818	Canola	nucleus	6.3	18.94
TraesCS2A01G080400.1	Wheat	cytosol	12.76	18.88
CDX78941	Canola	nucleus	8.4	18.12
OQU83714	Sorghum	cytosol, nucleus, plastid	15.45	17.42
TraesCS2D01G078000.1	Wheat	cytosol	9.32	17.26
CDY13917	Canola	endoplasmic reticulum, extracellular, mitochondrion	5.54	15.83
CDX70844	Canola	mitochondrion, plasma membrane	9.74	13.58
CDY41917	Canola	nucleus	10.16	12.66
TraesCS2D01G077900.1	Wheat	cytosol	5.46	12.04
CDX70841	Canola	nucleus	13.27	10.92
CDX88919	Canola	cytosol	13.6	10.25
CDX92584	Canola	mitochondrion	1.01	3.44

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.1	UniProt:A0A078HX14	EnsemblPlants:CDY41919	ProteinID:CDY41919	ProteinID:CDY41919.1
ncoils:Coil	InterPro:DUF3444	InterPro:DnaJ_domain	EnsemblPlantsGene:GSBRNA2T00073901001	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625	PFscan:PS50076	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI0004EE1D29	SEG:seg	:	:	:

Description

BnaC05g46850DBnaC05g46850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX14]

Coordinates

chrLK032510:-:177646..181947

Molecular Weight (calculated)

132203.0 Da

IEP (calculated)

9.181

GRAVY (calculated)

-0.862

Length

1191 amino acids

Sequence
(BLAST)

0001: MSTDSFSPRY SPRFDRNSHM HLIPCRLNPL SPPRSQPSFE SYEGCVHCSQ FLSLKWDSRV FERFDFKRFV AAMDCNKEEA TRAINLAEAK MKGGDFVGAH
0101: KLIMKARRLF PELENIQKLL AVCDVHSSAD KKIKGLDDWY GILQVQPSAD SDTIKKQYRK LCLLLHPDKN KFPGAEAAFK LVGEANRWLS DQSKRSQYDV
0201: RYRSHSLFAS KESNANANSL RNSSSANAAA VNIASGLTFW TCCRSCGHRY KYLKVYMNQL MHCSSCQKSY TACNIGSDGV SFSGSTAGVK QFQDQGISRQ
0301: HPSTGAESGK PETSAAAEMN KNGTVGKKPN KRSQKKQKRE AGDKKPKKDE GCTESEAEGG RPHKGETVTN NSKGAEIPKP DILKPQPEEK EPQASAGKSV
0401: PDLSAQKTNQ TARKKRKAVE ESSMSFEVDG SDAAVNETHT DESNKRKFSR KKPQVSYAEK RGNGDSVIPP TKKMKSGCEV ESDVNTKQTD ENNTSPELAD
0501: KGKAKESEDS GKKNILSAKN KEIESCDRNG EDEALSSKMG EVENGHRASE NGNTLDIPDP EFNVFEDERK PENFAVNQVW STCDSRDGMP RRYARVRKVL
0601: SSDFKLRVTY LKPVQENNDE SIPVTWGKFN NGETKDVENR SIFSGQMLHS VCNRVVSIYP RKGEIWAMFS DWDEESSTLE NHELPYKYDF VEIVNDFKEE
0701: AGIGAAYLGK VKGFVSLFQR EAKNTVCQVQ FAPERMLRFS HKVPAVKMTG MEKEGVPAGS YELDPTALPK DIFQAEAVNV EMDSETMKGK ADSPDPEAPE
0801: TEVNAKPVPE IVPSPPRKRQ KSDDDGGCSN RDKVCSTSVS IGKGEATKAN DSSSSQVSKK STPNGSRKNG EASDAFKLRK SPRLQTNASQ QIEETKSAKQ
0901: GDKMKTPKTT DKGLVTVSLG INKSSKGIQQ QVESQVGEGS KKRGRNGESK QNDLRAQLDG STNKSLETTP VSSSCKTPQR NAFDFNNERS VDKFRRDQIW
1001: AIYSDDKGMP TEYVKVKKVE TKPEVVLHVA HMELCPPSTE PVTRSVSCGE FKMETGKPKT LPLTSFSHRV KPFDGKQKIV RVYPRKGDIW ALRKSCDSTK
1101: AEHDIVEVVE GYCEGKSIKA MALTAKGFSS IYTRKHGSHV SSLVVPKAEM SRFSHQIPAV KQEKRATRVA EGGYWELDPA AIPPPTTIVI D

Best Arabidopsis Sequence Match ( AT3G04980.2 )
(BLAST)

0001: MECNKEDAIR ASKIAEEKME AGDFVGAHKF VTKAQRLFPN LENIVQMMTI CDVHSSAIKK IKGLDDWYGV LQVQPYADAD TIKKQYRKLA LLLHPDKNKF
0101: AGAEAAFKLV GEANRLLSDQ IKRSQYDNRY RSHSMFANRH VNVYSGRHCA ATNNAAENIA GVFTFWTRCR HCGQCYKYLR EYMNTSMHCS SCQKSFVACK
0201: MRCDGVPPSS STAGRKEFQD QVMSNTSRQN ASTAAESGSS AADMGKNGKV GGKVNKKNQE KQKNGAVNRG TKKEEGCTEN DAEGRKPQTS ETGTNISAEM
0301: PKADVLKPQH QVKEEPDTSA EKSIPDLSAP QKNRAPKKKR KVVEESSKSF EVDSSDTAGA KTDTNEHNKR KSSRKKPQVS YAKEGSDGDF VSPPNKKTKS
0401: GFEFESEPNK KQTAEDNKSP KLAVSGVSSA SSHSYKGKAK KNAHSGNEDN LSAKNKVSEG CDGNGEDAAL LSKIGRVEKG YKANENSNPL DIPDLEFSVF
0501: KVERKTEDFA VNQVWSTTTD CRDGMPRKYA RVKKVLNGEF KLRITYLDPV LDKTDESIPV ACGKFKNGKT MEVKDSSIFS GQMHHLRCNN IVSIYPRKGE
0601: IWAIFREWEE EWNTSLKKHK FPYKYDFVEI VSDFHDLNGV GVAYLGKLKG SVQLFHWEPQ HGICQIQCSP KDMLRFSHKV PAVKMTGKEK ESVPPNSYEL
0701: DPAALPKDIF QVDAVDMEMD SEILKGKADG PYKVGAKAKA VQETASSPRK RQKSDDDNDD GVCSNLGEVI GGSNRSHIFS SCEVDDKNTS TKSRKDGEST
0801: DVFRLRKSPR LQTIPNHQGD EKKSAKQGNK MNTPKKMDKG LVTDSLGVDE KKTSKSRKNG EATDVFKLRK SPRLQTIPSQ QGDEMKSTKQ GNKMNTPKKT
0901: DKGLETDSLG VRKSPNGIHQ PAESQEGESS KKQGCNGEIP SLSKQNDLPT QLGGSTYKSP RTTHVSPHCK TPRRNAFDFQ NLRSEDKFEV NQIWAIYSND
1001: NGMPLEYVKI KKIETKPKFV LRGTPTELYP PSTEPVTRTV SCGEFKLLKG RPKIIPHASF SHLVKPFDSS KRFRFKVYPR KGEIWALYKN CDSTEEPDIV
1101: EVVEDNCDGE IVKVVALTAM GSSFQRKQGS DVGLIDISKA EMSRFSHQIP AIRHPKKTTR LVKGGYYWEL DPIAIPSRTI VID

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.