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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • cytosol 2
  • golgi 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040846_P001 Maize cytosol 84.14 87.82
EER88793 Sorghum cytosol 72.98 75.21
Os01t0375100-01 Rice nucleus 63.56 61.61
TraesCS3A01G213800.3 Wheat nucleus 63.56 60.7
TraesCS3D01G215900.1 Wheat nucleus 63.56 60.64
TraesCS3B01G244000.4 Wheat nucleus 63.87 60.35
HORVU3Hr1G051850.2 Barley nucleus 63.15 54.55
KXG28768 Sorghum nucleus 45.04 45.13
PGSC0003DMT400057888 Potato cytosol 8.9 43.94
EES09993 Sorghum nucleus 48.52 42.97
OQU83710 Sorghum cytosol 41.25 41.38
PGSC0003DMT400089411 Potato cytosol 9.21 40.18
OQU83709 Sorghum cytosol 44.73 37.61
VIT_05s0020g02050.t01 Wine grape nucleus 31.32 36.65
Solyc01g067770.1.1 Tomato extracellular, vacuole 10.24 36.63
Bra001194.1-P Field mustard cytosol 7.47 36.14
CDX74108 Canola cytosol 7.47 36.14
Bra039476.1-P Field mustard cytosol 7.57 35.92
CDX74107 Canola cytosol 9.72 35.45
KRH11282 Soybean nucleus 33.88 34.19
KRH21004 Soybean nucleus 33.57 33.88
PGSC0003DMT400058792 Potato nucleus 31.73 33.81
KRH50936 Soybean nucleus 32.86 33.51
Solyc01g067780.1.1 Tomato cytosol 30.71 33.22
OQU79981 Sorghum cytosol 10.75 33.12
CDY13919 Canola nucleus 15.97 33.05
CDX88917 Canola nucleus 11.16 32.83
PGSC0003DMT400058788 Potato nucleus 16.38 32.72
KXG32106 Sorghum cytosol 33.78 32.64
PGSC0003DMT400086601 Potato cytosol 6.65 32.34
CDX92582 Canola nucleus 27.64 32.07
EES08665 Sorghum nucleus 22.11 31.81
Solyc01g098250.2.1 Tomato nucleus 31.93 31.42
CDX70837 Canola mitochondrion 16.17 31.35
CDY08056 Canola nucleus 19.96 31.05
OQU83714 Sorghum cytosol, nucleus, plastid 33.47 30.97
CDY24701 Canola nucleus 18.63 30.9
Solyc08g029220.1.1 Tomato nucleus 24.87 30.8
PGSC0003DMT400094016 Potato nucleus 9.21 30.72
CDY13918 Canola nucleus 18.01 30.72
Bra002183.1-P Field mustard nucleus 17.81 30.63
PGSC0003DMT400038431 Potato nucleus 24.57 30.5
KRH02180 Soybean cytosol, nucleus, plastid 32.45 30.36
CDX70843 Canola extracellular, golgi 16.79 30.31
Bra006478.1-P Field mustard nucleus 16.48 30.26
CDX88918 Canola cytosol 16.48 30.26
KRH34004 Soybean cytosol 9.83 30.19
KRG92798 Soybean cytosol 21.9 30.18
EER98396 Sorghum nucleus 34.7 29.71
PGSC0003DMT400057904 Potato nucleus 32.75 29.6
Solyc10g007630.1.1 Tomato cytosol 14.64 29.42
KRH34003 Soybean cytosol 8.7 29.21
PGSC0003DMT400057894 Potato cytosol 11.57 29.12
Bra006479.1-P Field mustard cytosol 16.38 28.99
Bra020757.1-P Field mustard nucleus 19.14 28.64
CDY05255 Canola nucleus 19.34 28.55
VIT_14s0030g00640.t01 Wine grape nucleus 33.98 28.4
PGSC0003DMT400054841 Potato cytosol 14.33 28.34
CDY19714 Canola nucleus 27.84 28.27
CDX99992 Canola cytosol 27.23 28.27
CDX70840 Canola nucleus 16.89 28.25
KRG96896 Soybean cytosol 30.4 28.07
PGSC0003DMT400057893 Potato cytosol 13.82 27.89
Solyc01g098340.2.1 Tomato cytosol 22.82 27.88
Bra009972.1-P Field mustard nucleus 17.91 27.82
CDX86172 Canola nucleus 17.91 27.82
KRH68628 Soybean cytosol 29.99 27.46
CDX80667 Canola nucleus 18.63 27.37
PGSC0003DMT400057887 Potato cytosol 23.13 26.84
EES07899 Sorghum cytosol 20.06 26.67
Bra006476.1-P Field mustard nucleus 15.86 26.36
CDX88920 Canola nucleus 15.86 26.36
Solyc01g098310.1.1 Tomato cytosol 12.18 26.1
CDY27809 Canola nucleus 26.3 25.91
Bra006473.1-P Field mustard plastid 18.53 25.75
CDX88924 Canola plastid 18.63 25.74
CDX92586 Canola nucleus 9.11 25.43
EES10933 Sorghum cytosol 18.83 25.41
EES10633 Sorghum cytosol 18.83 25.03
AT4G19590.2 Thale cress nucleus 9.31 24.33
OQU85000 Sorghum cytosol 18.01 24.18
Solyc01g098330.1.1 Tomato nucleus 9.93 23.66
KXG34037 Sorghum cytosol 18.22 23.24
EES11310 Sorghum cytosol, plastid 11.57 22.97
Bra024236.1-P Field mustard nucleus 8.6 22.83
KXG32108 Sorghum cytosol 14.02 22.72
AT5G37760.1 Thale cress cytosol 4.81 22.71
CDY41919 Canola nucleus, plastid 27.64 22.67
CDX92856 Canola nucleus 10.85 22.55
Bra039461.1-P Field mustard cytosol 12.08 22.14
CDY27796 Canola cytosol 11.98 22.12
CDY41935 Canola cytosol 11.98 21.99
KXG34016 Sorghum nucleus 18.12 21.35
KXG19130 Sorghum cytosol 11.05 21.34
Bra039477.1-P Field mustard plastid 11.67 21.19
CDY29872 Canola cytosol 9.31 20.4
KXG37199 Sorghum cytosol 5.12 18.25
CDY27811 Canola nucleus 8.6 17.54
CDY13917 Canola endoplasmic reticulum, extracellular, mitochondrion 6.65 15.59
CDX70844 Canola mitochondrion, plasma membrane 12.69 14.52
Bra002182.1-P Field mustard nucleus 16.07 14.47
Bra006477.1-P Field mustard cytosol 19.24 13.67
Bra039474.1-P Field mustard nucleus 20.27 12.98
CDX70841 Canola nucleus 18.63 12.58
CDX88919 Canola cytosol 18.42 11.39
CDY41917 Canola nucleus 10.44 10.67
Protein Annotations
Gene3D:1.10.287.110MapMan:35.2EntrezGene:8075487UniProt:C5XLE2InterPro:DUF3444InterPro:DnaJ_domain
InterPro:DnaJ_domain_CSEnsemblPlants:EES00793ProteinID:EES00793ProteinID:EES00793.1InterPro:IPR001623InterPro:IPR036869
InterPro:J_dom_sfPFAM:PF00226PFAM:PF11926PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076
PANTHER:PTHR10825PANTHER:PTHR10825:SF38SMART:SM00271EnsemblPlantsGene:SORBI_3003G171500SUPFAM:SSF46565UniParc:UPI0001A84639
RefSeq:XP_002455673.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:37382037..37390012
Molecular Weight (calculated)
109518.0 Da
IEP (calculated)
7.715
GRAVY (calculated)
-0.627
Length
977 amino acids
Sequence
(BLAST)
001: MECNREEALK AREIAVKKLE NRDFVAAKRI ALKAQRIFPE IENIPQLLTV CEVHCAAEAK VNGMLDFYGI LQVEWTADEV TIKKQYRKLV LSLHPDKNSY
101: AGAESAFKFV AEAYSTLADR TKRYAYDIKW RAAPKIAPKQ ARQPKQAAEP TRATQPNQDT QPKQETKPKH AAKPTQATQP MTTVPINKND ANRSNTVGYG
201: PSGSTPTDGW TFWTICIHCK TKYKYHGDIL NRQIRCQNCR QNFFAHQIST EDVPSAFSSK TVNSAGQQGC VPTQQGCSTN IFSRENKEGP GSKGVEFSAK
301: NSSKASAPNG KDGADGRMQT DSTVPDFGDR KNLGGGVDTS AEPGAAGIPS PRRSSRRKAC VDANNILNSP KKKSRTLKDW FSNAASSSNK VVHDNVAHAD
401: GQVSEPHVSS KTDNQDRSGT VNEDNKRNNK KNCGPPAEKP CNTGSFTYPD PEFFDFDKCR DVKLFAVDQI WALYDDFDAM PRFYARIRHL NTTNFRVKYT
501: WLEHSAVNDD EETWTDNNLP VACGNFTLGN TEESQDPLMF SHIVSWAKGR KRGSYVIYPN KGEVWALYKG WSMQWVSDAD NHRSYEYEVV EVLSNFTMEA
601: GVTVIPLVKV KGFVSLFAPA KDKSSFVISS SELLRFSHSI PFFRTVGNEK VGVPCGFLEL DTVSLPSNLD VAFPPVTLDS CVPINKTMSS GFVDLSGNTT
701: PGRGNEDSAQ KGNHRNVGKL RKQSLQTPQQ HNACLASMSG YSAPQGCPSP TVFTYPETVF YNFEEDRSYN KFERGQIWAL YNDFDGLPKY YGWVTKVDLD
801: PFGVHLTWLE ACPRSEQENM WLEHELPVSC GTFKIKNWRI KYDTNDSFSH VVETQVGSKR QFEIHPEVGE IWAIYHNWSP GWVPSSKDAC EYAIGEIIER
901: TEASTKVLFL TQVDGYRTVF KPDNERSILE VPTKDDLRFS HRILSFHLTR EKGGELYGFY ELDPAAIPGP FLCGGTH
Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)
001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.