Factsheet for VIT_05s0020g02050.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21004	Soybean	nucleus	54.01	46.59
KRH11282	Soybean	nucleus	53.77	46.38
KRH50936	Soybean	nucleus	52.57	45.82
CDY13919	Canola	nucleus	25.75	45.55
GSMUA_Achr11P...	Banana	nucleus	34.61	44.19
PGSC0003DMT400058788	Potato	nucleus	25.75	43.97
Solyc01g067770.1.1	Tomato	extracellular, vacuole	14.37	43.96
Bra001194.1-P	Field mustard	cytosol	10.54	43.56
CDX74108	Canola	cytosol	10.18	42.08
PGSC0003DMT400058792	Potato	nucleus	45.51	41.44
AT5G18750.1	Thale cress	nucleus	43.71	41.29
KRH02180	Soybean	cytosol, nucleus, plastid	51.26	41.0
CDX92582	Canola	nucleus	41.08	40.74
Solyc01g067780.1.1	Tomato	cytosol	43.11	39.87
PGSC0003DMT400086601	Potato	cytosol	9.22	38.31
GSMUA_Achr5P00460_001	Banana	cytosol	32.57	37.41
VIT_17s0000g01140.t01	Wine grape	cytosol	11.02	36.51
GSMUA_Achr2P02410_001	Banana	cytosol	33.77	36.43
CDY24701	Canola	nucleus	25.63	36.33
AT3G06340.4	Thale cress	cytosol	28.74	35.66
CDY08056	Canola	nucleus	26.59	35.35
CDX74107	Canola	cytosol	11.26	35.07
VIT_14s0030g00640.t01	Wine grape	nucleus	47.78	34.13
Bra020757.1-P	Field mustard	nucleus	26.59	34.0
CDY05255	Canola	nucleus	25.99	32.78
Os01t0375100-01	Rice	nucleus	38.68	32.04
Zm00001d040846_P001	Maize	cytosol	35.81	31.94
TraesCS6A01G167100.1	Wheat	cytosol	36.89	31.56
TraesCS6D01G155600.1	Wheat	cytosol	36.89	31.56
TraesCS6B01G194500.1	Wheat	cytosol	36.89	31.56
EES00793	Sorghum	cytosol	36.65	31.32
VIT_01s0010g03770.t01	Wine grape	cytosol	8.98	30.99
TraesCS4B01G101500.1	Wheat	cytosol	33.17	30.92
Zm00001d008413_P001	Maize	cytosol	37.37	30.65
HORVU6Hr1G033850.1	Barley	cytosol	35.69	30.56
Os06t0535300-01	Rice	nucleus	37.01	30.35
Zm00001d008412_P001	Maize	cytosol	37.01	30.32
KXG32106	Sorghum	cytosol	36.29	29.97
EER88793	Sorghum	cytosol	33.89	29.85
TraesCS3A01G213800.3	Wheat	nucleus	36.53	29.81
TraesCS4A01G214500.1	Wheat	nucleus	23.59	29.4
TraesCS3D01G215900.1	Wheat	nucleus	36.05	29.39
Os11t0578100-00	Rice	cytosol	37.01	29.34
OQU83710	Sorghum	cytosol	34.13	29.26
TraesCS3B01G244000.4	Wheat	nucleus	36.05	29.11
Os11t0574200-00	Rice	cytosol	11.38	29.05
HORVU4Hr1G043860.4	Barley	cytosol	32.81	28.87
TraesCS2A01G084900.1	Wheat	nucleus	35.57	28.72
EER98396	Sorghum	nucleus	38.56	28.22
HORVU7Hr1G050080.1	Barley	nucleus	34.85	28.14
KXG28768	Sorghum	nucleus	32.81	28.1
Zm00001d019461_P002	Maize	cytosol	37.25	27.87
TraesCS2B01G099600.2	Wheat	nucleus	35.93	27.35
TraesCS2D01G082800.1	Wheat	nucleus	35.57	27.02
EES09993	Sorghum	nucleus	35.69	27.02
HORVU3Hr1G051850.2	Barley	nucleus	36.53	26.97
TraesCS1B01G054900.1	Wheat	nucleus	37.48	26.26
TraesCS1D01G042900.1	Wheat	nucleus	37.48	26.26
TraesCS1A01G042500.1	Wheat	nucleus	37.25	26.13
VIT_16s0050g02590.t01	Wine grape	cytosol	23.11	25.98
VIT_14s0068g01140.t01	Wine grape	cytosol	23.35	25.93
VIT_02s0012g02290.t01	Wine grape	nucleus	18.2	25.72
HORVU1Hr1G008940.2	Barley	nucleus	36.65	25.54
VIT_12s0057g00710.t01	Wine grape	cytosol	20.96	25.22
EES08665	Sorghum	nucleus	20.48	25.18
HORVU2Hr1G084660.1	Barley	cytosol	26.23	25.17
OQU83709	Sorghum	cytosol	34.37	24.7
Zm00001d052947_P001	Maize	plastid	25.39	24.51
TraesCS2B01G366100.1	Wheat	cytosol	26.47	24.05
TraesCS2A01G347700.1	Wheat	mitochondrion	26.35	23.94
VIT_01s0010g03760.t01	Wine grape	cytosol	23.23	23.75
HORVU2Hr1G013270.2	Barley	cytosol	24.67	23.71
TraesCS2D01G077700.1	Wheat	cytosol	24.31	23.52
TraesCS2B01G095100.1	Wheat	cytosol	24.31	23.5
Os11t0573800-00	Rice	nucleus	23.23	21.13
VIT_17s0000g01150.t01	Wine grape	nucleus	22.4	21.11
OQU83714	Sorghum	cytosol, nucleus, plastid	26.23	20.74
VIT_05s0077g01780.t01	Wine grape	nucleus	5.15	19.72
TraesCS2A01G080400.1	Wheat	cytosol	18.8	19.5
TraesCS2D01G078000.1	Wheat	cytosol	14.73	19.13
TraesCS2D01G077900.1	Wheat	cytosol	8.62	13.33

Protein Annotations

ArrayExpress:VIT_05s0020g02050	EMBL:FN595749	EnsemblPlants:VIT_05s0020g02050.t01	EnsemblPlantsGene:VIT_05s0020g02050	Gene3D:1.10.287.110	InterPro:DUF3444
InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45089	PFAM:PF00226
PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	ProteinID:CCB50357	ProteinID:CCB50357.1	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00021092C5	UniProt:F6HDI6	MapMan:35.2	:

Description

No Description!

Coordinates

chr5:+:3805550..3809148

Molecular Weight (calculated)

94624.0 Da

IEP (calculated)

5.146

GRAVY (calculated)

-0.741

Length

835 amino acids

Sequence
(BLAST)

001: MDCNKEEAVR AKGLAEKKMQ NKDFVGARKI AIKAQQLYPD LENISQMLTV CDVHCSAEHK LIGNEIDWYG VLQIEQTADE ASIKKQYRKL ALLLHPDKNK
101: FSGAEAAFKL IGEAQRVLLD REKRSLHDMR RKACMKPKAA HQTQPRANKN VNFGRQSGVQ NSSMNNAATT YAGPAFPQQK PVPNQDAHKV GPQSTFQKPA
201: SNVGFQGKFG AKSPGKVNGK KRKKQEVESS ESCDTGSSSD TEELVMEEDD DLPAKQNYGQ KSEDVSLKEN ICKINKQAGA AADVEEDKKD SGQKGTGSFD
301: ESLPNGTKET KKDNGKETVT DDACKRTAKD PEFYEYPDPD FNDFDKDRKE ECFTVGQTWA VYDTVDAMPR FYAQIRKVFS TGFKLRITWL EPDPSDEAEI
401: EWVSEDLPYS CGNFKRGKSE NTGDRLMFSH LVSWEKDRSR DAYKIHPRKG ETWALFKNWD IKWSSDPESH RKYEFEYVEV LSEYDENVGI SVVYLSKLKG
501: FACLFCRILK QGIDSILIPP SELLRFSHRI PSFKLTGEER QDVPRGSLEL DPASLPANVE EIPVPEEDLK MEASNANSNG SNGNPDDILK DHSSDPASVV
601: ASTPEAYEIP EPDFCNFDAE KSPEKFQVGQ IWALYSDEDG LPKYYCQIKK IDSDPDFKLH VTWLEACSPP NDMIQWLDKK MLTTCGRFKI KKGKPQTYTS
701: AASFSHQLRA ELTDKKNEYA IFPRKGEVWA LYKNWNAEMT CSDLENCEYD IVEVLDENDL WIEVLLLERV EGYNAVFKSQ VEGRLPFSMK IPRVELLRFS
801: HQIPAFHLTE ERDGALKGNL ELDPASLPIL LFCSN

Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)

001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.