Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G213800.3 | Wheat | nucleus | 97.56 | 97.65 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 96.39 | 95.45 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 92.48 | 83.73 |
| Os01t0375100-01 | Rice | nucleus | 64.84 | 65.87 |
| EES00793 | Sorghum | cytosol | 60.64 | 63.56 |
| Zm00001d040846_P001 | Maize | cytosol | 57.13 | 62.5 |
| EER88793 | Sorghum | cytosol | 54.59 | 58.97 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 47.95 | 44.68 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.52 | 38.89 |
| PGSC0003DMT400089411 | Potato | cytosol | 8.11 | 37.05 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 9.67 | 36.26 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 29.39 | 36.05 |
| Bra039476.1-P | Field mustard | cytosol | 7.23 | 35.92 |
| CDX74107 | Canola | cytosol | 9.08 | 34.7 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 32.81 | 34.43 |
| CDY13919 | Canola | nucleus | 15.72 | 34.11 |
| KRH11282 | Soybean | nucleus | 31.93 | 33.78 |
| Bra001194.1-P | Field mustard | cytosol | 6.64 | 33.66 |
| CDX74108 | Canola | cytosol | 6.64 | 33.66 |
| PGSC0003DMT400058792 | Potato | nucleus | 30.08 | 33.59 |
| KRH50936 | Soybean | nucleus | 31.15 | 33.3 |
| KRH21004 | Soybean | nucleus | 31.35 | 33.16 |
| CDX88917 | Canola | nucleus | 10.55 | 32.53 |
| Solyc01g067780.1.1 | Tomato | cytosol | 28.22 | 32.0 |
| PGSC0003DMT400086601 | Potato | cytosol | 6.25 | 31.84 |
| Solyc01g098250.2.1 | Tomato | nucleus | 30.86 | 31.82 |
| CDY24701 | Canola | nucleus | 18.07 | 31.41 |
| CDX92582 | Canola | nucleus | 25.59 | 31.12 |
| PGSC0003DMT400058788 | Potato | nucleus | 14.65 | 30.67 |
| KRH34004 | Soybean | cytosol | 9.47 | 30.5 |
| CDY08056 | Canola | nucleus | 18.65 | 30.41 |
| CDY13918 | Canola | nucleus | 16.89 | 30.19 |
| Solyc08g029220.1.1 | Tomato | nucleus | 23.24 | 30.16 |
| PGSC0003DMT400038431 | Potato | nucleus | 23.14 | 30.11 |
| Bra002183.1-P | Field mustard | nucleus | 16.7 | 30.11 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 30.66 | 30.08 |
| PGSC0003DMT400057904 | Potato | nucleus | 31.64 | 29.97 |
| CDX70843 | Canola | extracellular, golgi | 15.62 | 29.57 |
| CDX70837 | Canola | mitochondrion | 14.45 | 29.37 |
| Bra006479.1-P | Field mustard | cytosol | 15.82 | 29.35 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 33.5 | 29.34 |
| Bra006478.1-P | Field mustard | nucleus | 15.14 | 29.14 |
| PGSC0003DMT400094016 | Potato | nucleus | 8.3 | 29.01 |
| CDX88918 | Canola | cytosol | 15.04 | 28.95 |
| KRH34003 | Soybean | cytosol | 8.2 | 28.87 |
| KRG92798 | Soybean | cytosol | 19.82 | 28.63 |
| Bra020757.1-P | Field mustard | nucleus | 18.16 | 28.48 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 33.11 | 28.44 |
| KRG96896 | Soybean | cytosol | 29.2 | 28.26 |
| Solyc10g007630.1.1 | Tomato | cytosol | 13.38 | 28.19 |
| Bra009972.1-P | Field mustard | nucleus | 17.29 | 28.14 |
| CDX86172 | Canola | nucleus | 17.29 | 28.14 |
| KRH68628 | Soybean | cytosol | 29.3 | 28.12 |
| CDY05255 | Canola | nucleus | 18.16 | 28.1 |
| CDY19714 | Canola | nucleus | 26.37 | 28.07 |
| Solyc01g098340.2.1 | Tomato | cytosol | 21.88 | 28.0 |
| PGSC0003DMT400054841 | Potato | cytosol | 13.48 | 27.94 |
| CDX99992 | Canola | cytosol | 25.49 | 27.74 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 23.34 | 27.69 |
| CDY27809 | Canola | nucleus | 26.76 | 27.62 |
| CDX80667 | Canola | nucleus | 17.87 | 27.52 |
| PGSC0003DMT400057894 | Potato | cytosol | 10.35 | 27.32 |
| PGSC0003DMT400057893 | Potato | cytosol | 12.89 | 27.27 |
| Solyc01g098310.1.1 | Tomato | cytosol | 11.82 | 26.54 |
| PGSC0003DMT400057887 | Potato | cytosol | 21.68 | 26.37 |
| CDX70840 | Canola | nucleus | 14.94 | 26.2 |
| Bra006476.1-P | Field mustard | nucleus | 15.04 | 26.19 |
| CDX88920 | Canola | nucleus | 15.04 | 26.19 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 18.85 | 25.87 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 18.16 | 25.38 |
| TraesCS3D01G434400.1 | Wheat | cytosol | 18.07 | 25.0 |
| Bra006473.1-P | Field mustard | plastid | 17.09 | 24.89 |
| CDX88924 | Canola | plastid | 17.09 | 24.75 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 17.97 | 24.18 |
| AT5G37760.1 | Thale cress | cytosol | 4.88 | 24.15 |
| AT4G19590.2 | Thale cress | nucleus | 8.79 | 24.06 |
| CDY41919 | Canola | nucleus, plastid | 27.44 | 23.59 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 14.75 | 23.48 |
| CDX92586 | Canola | nucleus | 8.01 | 23.43 |
| Bra024236.1-P | Field mustard | nucleus | 8.01 | 22.28 |
| Solyc01g098330.1.1 | Tomato | nucleus | 8.89 | 22.2 |
| CDY27796 | Canola | cytosol | 11.33 | 21.93 |
| CDX92856 | Canola | nucleus | 10.06 | 21.91 |
| CDY41935 | Canola | cytosol | 11.33 | 21.8 |
| Bra039461.1-P | Field mustard | cytosol | 11.33 | 21.76 |
| Bra039477.1-P | Field mustard | plastid | 10.84 | 20.63 |
| CDY29872 | Canola | cytosol | 8.98 | 20.63 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 9.57 | 18.15 |
| CDY27811 | Canola | nucleus | 8.3 | 17.75 |
| TraesCS5D01G508400.1 | Wheat | plastid | 5.76 | 16.53 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 12.21 | 14.64 |
| Bra002182.1-P | Field mustard | nucleus | 15.33 | 14.47 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.76 | 14.15 |
| Bra039474.1-P | Field mustard | nucleus | 20.7 | 13.89 |
| Bra006477.1-P | Field mustard | cytosol | 17.97 | 13.38 |
| CDX70841 | Canola | nucleus | 17.48 | 12.37 |
| CDX88919 | Canola | cytosol | 17.09 | 11.07 |
| CDY41917 | Canola | nucleus | 9.96 | 10.67 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G215900.1 | EnsemblPlantsGene:TraesCS3D01G215900 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF38 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:292026871..292029945
Molecular Weight (calculated)
113323.0 Da
IEP (calculated)
8.335
GRAVY (calculated)
-0.617
Length
1024 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESNREEAVK AREIALKKLE SKDFVGAKRI ALKAQRIFPE LENLSQLLTV CEVHCAAEAK INELLDFYGI LQVDVTADEA TIKKQYRKLA FSLHPDKNSY
0101: PGAEAAFKLV AEAHSTLSDR TKKPAYDIKW RVASRIAPKQ GSELKQATGP KQGTQPKQAT QSKKAAIPKQ ATVPKQAPIP KQAAVPKQAA VPKQTATEQM
0201: KKPGANRSSV AGGEPPVPST TAGQAIWTIC IHCRTRYQYY SGVLNHRIRC QNCSKYFVAS KLNGQDVPSV FTSNSIRGVG QQSGFPSQPD CSTKFSPSRL
0301: NGDAKPSVNG AQTAEHMKSA RAAGEEKVNH AGAAGKSGVE FSTGNMSKSS APSANDKAGG RMASDPAGPD VAYSKNPCSR VVDTPAEPGA TGSPSPRRSA
0401: RRKANHDAST PVPPSKKRRT LKDWFSNADT SCKKMFDDNV ACADVKTGEA HVPSKAHNEE KGSTAKEGNQ ESVKKESTCD ASAAKNPCDS AQLTYPDPEF
0501: FDFDKGRNVN LFAVDQIWAV YDDRDGMPRY YARIKHVNAT KSTIRYTWLE HKAVNDEEDR WTDKELPVAC GKFNLGKTEV SKGALMFSHT VVPWVMGRRG
0601: CAYEIYPRKG EVWALYKGWS MEWCSDADNH KTYEYDVVEV MSDFTMEAGA AVFPLVKIKG FVSLFGKAID RSSFVIPSSE LLRFSHNIPF YRTKGNEKVG
0701: VAGGFLELDT VSLPSNLDAS FPSVTIDKTI SSGFIDASDI STPRPGNEPS AQKENQQSGG KRIDDSLEQT PREKQKGGTA SVPGSSSQLF CTSPSTIATY
0801: PDSEFYNFEE GRSYNKFERG QIWALYSDLD KFPKYYGWVT KVDMEPFRLH LTWLEACPQL EQEKMWLERD IPVSCGTFKL RNWRIKYDSN DAFSHLVETS
0901: QVNGQRFEIH PRVGEIWAIY NNNWAPDWVP SSDDACEYAV GEITERTEAS TKFSFLTPVD GYTALFRFDN ERGILEIPAN ENLRFSHHIP SYRLTDEKSG
1001: TLRGFYELDP ASVPDAFLVR GGTC
0101: PGAEAAFKLV AEAHSTLSDR TKKPAYDIKW RVASRIAPKQ GSELKQATGP KQGTQPKQAT QSKKAAIPKQ ATVPKQAPIP KQAAVPKQAA VPKQTATEQM
0201: KKPGANRSSV AGGEPPVPST TAGQAIWTIC IHCRTRYQYY SGVLNHRIRC QNCSKYFVAS KLNGQDVPSV FTSNSIRGVG QQSGFPSQPD CSTKFSPSRL
0301: NGDAKPSVNG AQTAEHMKSA RAAGEEKVNH AGAAGKSGVE FSTGNMSKSS APSANDKAGG RMASDPAGPD VAYSKNPCSR VVDTPAEPGA TGSPSPRRSA
0401: RRKANHDAST PVPPSKKRRT LKDWFSNADT SCKKMFDDNV ACADVKTGEA HVPSKAHNEE KGSTAKEGNQ ESVKKESTCD ASAAKNPCDS AQLTYPDPEF
0501: FDFDKGRNVN LFAVDQIWAV YDDRDGMPRY YARIKHVNAT KSTIRYTWLE HKAVNDEEDR WTDKELPVAC GKFNLGKTEV SKGALMFSHT VVPWVMGRRG
0601: CAYEIYPRKG EVWALYKGWS MEWCSDADNH KTYEYDVVEV MSDFTMEAGA AVFPLVKIKG FVSLFGKAID RSSFVIPSSE LLRFSHNIPF YRTKGNEKVG
0701: VAGGFLELDT VSLPSNLDAS FPSVTIDKTI SSGFIDASDI STPRPGNEPS AQKENQQSGG KRIDDSLEQT PREKQKGGTA SVPGSSSQLF CTSPSTIATY
0801: PDSEFYNFEE GRSYNKFERG QIWALYSDLD KFPKYYGWVT KVDMEPFRLH LTWLEACPQL EQEKMWLERD IPVSCGTFKL RNWRIKYDSN DAFSHLVETS
0901: QVNGQRFEIH PRVGEIWAIY NNNWAPDWVP SSDDACEYAV GEITERTEAS TKFSFLTPVD GYTALFRFDN ERGILEIPAN ENLRFSHHIP SYRLTDEKSG
1001: TLRGFYELDP ASVPDAFLVR GGTC
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.