Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70837 | Canola | mitochondrion | 25.92 | 74.4 |
| CDX88924 | Canola | plastid | 34.76 | 71.15 |
| CDX88919 | Canola | cytosol | 77.33 | 70.78 |
| CDX88917 | Canola | nucleus | 13.82 | 60.24 |
| CDX88918 | Canola | cytosol | 21.63 | 58.83 |
| CDX70843 | Canola | extracellular, golgi | 20.94 | 56.01 |
| CDY13918 | Canola | nucleus | 20.94 | 52.88 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 14.51 | 50.36 |
| AT5G18740.1 | Thale cress | nucleus | 13.96 | 46.98 |
| PGSC0003DMT400057888 | Potato | cytosol | 5.87 | 42.93 |
| CDX92584 | Canola | mitochondrion | 10.3 | 42.69 |
| CDX88920 | Canola | nucleus | 16.38 | 40.31 |
| CDX70840 | Canola | nucleus | 16.24 | 40.24 |
| CDX92586 | Canola | nucleus | 9.4 | 38.86 |
| CDX92583 | Canola | mitochondrion, plastid | 9.26 | 38.62 |
| CDX74108 | Canola | cytosol | 5.25 | 37.62 |
| PGSC0003DMT400089411 | Potato | cytosol | 5.74 | 37.05 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 17.21 | 29.16 |
| CDY13919 | Canola | nucleus | 8.43 | 25.85 |
| CDX92582 | Canola | nucleus | 14.58 | 25.06 |
| PGSC0003DMT400057894 | Potato | cytosol | 6.36 | 23.71 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 11.61 | 23.11 |
| Os11t0574200-00 | Rice | cytosol | 5.18 | 22.94 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 10.57 | 22.84 |
| Solyc10g007630.1.1 | Tomato | cytosol | 7.6 | 22.63 |
| GSMUA_Achr11P... | Banana | nucleus | 10.16 | 22.48 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 11.61 | 21.71 |
| PGSC0003DMT400057893 | Potato | cytosol | 7.26 | 21.69 |
| PGSC0003DMT400054841 | Potato | cytosol | 7.39 | 21.66 |
| Solyc01g098340.2.1 | Tomato | cytosol | 11.89 | 21.5 |
| PGSC0003DMT400057887 | Potato | cytosol | 12.09 | 20.78 |
| Solyc01g098330.1.1 | Tomato | nucleus | 5.87 | 20.73 |
| Solyc01g098310.1.1 | Tomato | cytosol | 6.43 | 20.39 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 12.58 | 20.31 |
| Zm00001d040846_P001 | Maize | cytosol | 12.85 | 19.87 |
| CDY60893 | Canola | cytosol | 2.14 | 19.5 |
| CDY60894 | Canola | cytosol | 2.14 | 19.5 |
| Solyc01g098250.2.1 | Tomato | nucleus | 13.2 | 19.23 |
| EER88793 | Sorghum | cytosol | 12.58 | 19.2 |
| CDY24701 | Canola | nucleus | 7.74 | 19.02 |
| EES00793 | Sorghum | cytosol | 12.58 | 18.63 |
| KRG92798 | Soybean | cytosol | 9.12 | 18.62 |
| Os01t0375100-01 | Rice | nucleus | 12.85 | 18.45 |
| CDY08056 | Canola | nucleus | 7.95 | 18.31 |
| PGSC0003DMT400057904 | Potato | nucleus | 13.61 | 18.22 |
| OQU83710 | Sorghum | cytosol | 12.23 | 18.17 |
| CDY05255 | Canola | nucleus | 8.29 | 18.13 |
| CDY40464 | Canola | nucleus | 6.01 | 18.12 |
| KRH68628 | Soybean | cytosol | 13.27 | 17.99 |
| Os11t0578100-00 | Rice | cytosol | 13.06 | 17.95 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 11.75 | 17.91 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 12.65 | 17.89 |
| KRG96896 | Soybean | cytosol | 13.06 | 17.86 |
| CDY32121 | Canola | nucleus | 5.67 | 17.63 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 12.37 | 17.48 |
| CDY19714 | Canola | nucleus | 11.54 | 17.36 |
| CDX99992 | Canola | cytosol | 11.26 | 17.32 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 10.37 | 17.24 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 12.3 | 17.21 |
| CDY51818 | Canola | nucleus | 4.7 | 17.17 |
| KXG28768 | Sorghum | nucleus | 11.54 | 17.13 |
| CDX92856 | Canola | nucleus | 5.53 | 17.02 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 12.09 | 16.92 |
| CDX76994 | Canola | nucleus | 6.77 | 16.84 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 11.33 | 16.8 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 11.33 | 16.8 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 10.09 | 16.8 |
| Os06t0535300-01 | Rice | nucleus | 11.82 | 16.8 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 11.26 | 16.72 |
| CDY35353 | Canola | cytosol | 7.19 | 16.69 |
| Zm00001d008412_P001 | Maize | cytosol | 11.75 | 16.68 |
| Zm00001d052947_P001 | Maize | plastid | 9.95 | 16.65 |
| PGSC0003DMT400038431 | Potato | nucleus | 9.05 | 16.65 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 10.5 | 16.54 |
| CDX86172 | Canola | nucleus | 7.19 | 16.53 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 11.13 | 16.5 |
| Solyc08g029220.1.1 | Tomato | nucleus | 8.98 | 16.48 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 11.75 | 16.44 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 10.44 | 16.43 |
| CDY41935 | Canola | cytosol | 6.01 | 16.35 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 9.74 | 16.34 |
| KXG32106 | Sorghum | cytosol | 11.4 | 16.32 |
| CDY27811 | Canola | nucleus | 5.39 | 16.28 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 12.72 | 16.27 |
| CDY27809 | Canola | nucleus | 11.13 | 16.23 |
| Zm00001d008413_P001 | Maize | cytosol | 11.4 | 16.21 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 9.68 | 16.2 |
| EES08665 | Sorghum | nucleus | 7.6 | 16.2 |
| CDY29872 | Canola | cytosol | 4.98 | 16.14 |
| CDY27796 | Canola | cytosol | 5.87 | 16.07 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 12.16 | 16.04 |
| CDX80667 | Canola | nucleus | 7.33 | 15.94 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 11.96 | 15.74 |
| Zm00001d019461_P002 | Maize | cytosol | 11.96 | 15.5 |
| CDY11521 | Canola | nucleus | 6.29 | 15.37 |
| EER98396 | Sorghum | nucleus | 12.02 | 15.25 |
| CDY47298 | Canola | cytosol | 6.15 | 15.24 |
| CDX74632 | Canola | cytosol | 6.15 | 15.16 |
| OQU83709 | Sorghum | cytosol | 12.09 | 15.06 |
| EES09993 | Sorghum | nucleus | 11.47 | 15.05 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 10.85 | 14.87 |
| CDX76752 | Canola | nucleus | 6.36 | 14.86 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 12.09 | 14.68 |
| CDY49460 | Canola | nucleus | 6.57 | 14.57 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 11.89 | 14.43 |
| CDY19683 | Canola | cytosol | 6.84 | 14.29 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 11.61 | 14.12 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 11.68 | 14.11 |
| CDX76476 | Canola | cytosol | 0.97 | 13.73 |
| CDX93081 | Canola | nucleus | 6.5 | 13.56 |
| CDY15046 | Canola | nucleus | 6.43 | 13.48 |
| CDY41919 | Canola | nucleus, plastid | 10.92 | 13.27 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 7.26 | 13.04 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 5.74 | 12.91 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 1.94 | 12.73 |
| CDX99361 | Canola | cytosol | 1.17 | 11.64 |
| Os11t0573800-00 | Rice | nucleus | 7.26 | 11.44 |
| CDY34931 | Canola | cytosol | 1.73 | 11.11 |
| CDX74082 | Canola | cytosol | 1.66 | 10.62 |
| CDX99362 | Canola | nucleus | 2.07 | 10.53 |
| CDX74107 | Canola | cytosol | 1.8 | 9.7 |
| CDX76475 | Canola | cytosol | 1.31 | 9.22 |
| CDY12569 | Canola | cytosol | 2.28 | 9.22 |
| CDY08035 | Canola | cytosol | 0.62 | 9.09 |
| CDY41917 | Canola | nucleus | 5.94 | 9.0 |
| CDY31307 | Canola | cytosol | 0.55 | 8.7 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.04 | 8.62 |
| CDY12382 | Canola | nucleus | 2.14 | 8.47 |
| CDY27107 | Canola | nucleus | 2.14 | 8.47 |
| CDY09330 | Canola | cytosol | 1.31 | 8.44 |
| CDX76474 | Canola | cytosol | 1.38 | 8.33 |
| CDX76473 | Canola | cytosol | 1.38 | 8.26 |
| CDY60890 | Canola | cytosol | 1.38 | 8.26 |
| CDX99360 | Canola | cytosol | 1.8 | 7.81 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 2.9 | 7.78 |
| KRH34003 | Soybean | cytosol | 1.45 | 7.22 |
| CDX78941 | Canola | nucleus | 2.63 | 6.88 |
| CDX78942 | Canola | cytosol | 1.45 | 6.86 |
| KRH34004 | Soybean | cytosol | 1.31 | 5.97 |
Protein Annotations
| EnsemblPlants:CDX70841 | EnsemblPlantsGene:GSBRNA2T00140734001 | InterPro:DUF3444 | PFAM:PF11926 | ProteinID:CDX70841 | ProteinID:CDX70841.1 |
| SEG:seg | UniParc:UPI0004EEAD3B | MapMan:35.2 | : | : | : |
Description
BnaC03g09250D
Coordinates
chrLK031791:+:2335269..2343597
Molecular Weight (calculated)
164418.0 Da
IEP (calculated)
8.821
GRAVY (calculated)
-0.554
Length
1447 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDITINGVTE TWIQESPSSY QTPPSTIIKK FWTWCPSCLV CEIPRLGLSP GKNSSKDIMH KRVLIKKLLE IHKNHPVASN TRPSFWTTCR NCGHRERFLK
0101: EYVDKWFVCE KCREETIAME VLARSGEVLF NKLFLELKPR SKREAISPGF SCGVKVGEKR KRVEEVAALS QNHSKPVDNN RRGFNDNGDE ASSSGVANVD
0201: NNFGLRDSSS GGAVQVQPKI ADCADLKFND FGKLREEVNF AVGQVWALYD TTDKVPRQYA LVRKVSVPSF GLRITYLEPD PDDEEEIQWF EEDLPVSTGQ
0301: FRLGKNENTK DRSLFSHVTH CNEGGSNSVH FTVSPRKGET WALFKNWDIN WSSEPDSHRS YEYEFVEILS DYADGAAGVS VAFLHKAKGF ASVFFGMGTG
0401: GDADVVQIPS HSLYRFSHMI PSFKLTGTEA KAALPATIEE VTVPPHLLAA PKPKPEELSF TINGKVFQAG QIWSYIGCFD NMPRDYCRIY KISLTQAFEQ
0501: APIYKMHAFR FKATRFPKDI IPWKEERYGE KKMPVGWGTY LLTQGSLALT PDRFSHLIVP VTFKERNEYT VLPKIGEVWA IYRFWTPYLS VYEMEKNYVD
0601: YGIVEVLDDA LDYKVLALEP ALQFKEDERK KRVFRAAESK PLDFDDDDDG TEVIFTIPRS KMLRFSHQIA ASRVTKEIDG ELKELFELDS TAVPDPKRRK
0701: LLDSLMDITI MNELHREKEA SETSTTAQSS DRSMVWTICP FCSVRYKSYI SLLNKPTRCH SCYLKFFASK SVVKGTPTKD KATQTSFSTT EKSVSSQKQI
0801: TRSSLVAPTP KSHAPTPKGQ TPTPKSHQVQ PQTAPSSLSP RFCAMCPFCK LKYRFPIKWT NKWFVCKCKK KFKTVEVSSS SLQQKTTTSK NQKESSPGLS
0901: CAVKVGEKRK RNECVESYNA GNRSALHKNK RVTSDNVVDN NRRGFNDNGD AGRQEESGWG KQLHQVNCSE ADRPEVTTLP NVISNNQKLN EKNKTPGLCD
1001: SGSGDALPVQ PKMSECAGLK FNDFNKRRED AKFSECQAWA LYDKADGMPR QYALIRKVSS PSFGLRITYL EPDPVDEKEI QWFEEDLPVS VGNFRFGKNQ
1101: NTKDLSIFSH AIRCQGSIMT GNFTSITCKR TNSGHFTVSP RKGETWALFK NWDIIKWSSE PDSHRSFEYE FVQILSDYAD GAGVYVSYLH KAKGFASVFF
1201: RVGTGPEDIL LILPHSLYRF SHRIPSFKLT GFKGKDAYEL DQAALPKTIL PTNSVSESNR KRKGQAIYFA RKGNVFKTGQ IWSFYSGNDD LPLHYCKIQK
1301: ITYTQVLEQE PVLKLHISRL KKATPSPKDV IDWEDGKMPL GCGTYYPKTV LEIITPDAVS HQVLLLGRES GHDRGEFYEI SWFKEVKKYQ HYDDDGWAEP
1401: IFTIPKTERL RFSHQVPASR VTKERFGDLE DLFKVESRAL PINLLGH
0101: EYVDKWFVCE KCREETIAME VLARSGEVLF NKLFLELKPR SKREAISPGF SCGVKVGEKR KRVEEVAALS QNHSKPVDNN RRGFNDNGDE ASSSGVANVD
0201: NNFGLRDSSS GGAVQVQPKI ADCADLKFND FGKLREEVNF AVGQVWALYD TTDKVPRQYA LVRKVSVPSF GLRITYLEPD PDDEEEIQWF EEDLPVSTGQ
0301: FRLGKNENTK DRSLFSHVTH CNEGGSNSVH FTVSPRKGET WALFKNWDIN WSSEPDSHRS YEYEFVEILS DYADGAAGVS VAFLHKAKGF ASVFFGMGTG
0401: GDADVVQIPS HSLYRFSHMI PSFKLTGTEA KAALPATIEE VTVPPHLLAA PKPKPEELSF TINGKVFQAG QIWSYIGCFD NMPRDYCRIY KISLTQAFEQ
0501: APIYKMHAFR FKATRFPKDI IPWKEERYGE KKMPVGWGTY LLTQGSLALT PDRFSHLIVP VTFKERNEYT VLPKIGEVWA IYRFWTPYLS VYEMEKNYVD
0601: YGIVEVLDDA LDYKVLALEP ALQFKEDERK KRVFRAAESK PLDFDDDDDG TEVIFTIPRS KMLRFSHQIA ASRVTKEIDG ELKELFELDS TAVPDPKRRK
0701: LLDSLMDITI MNELHREKEA SETSTTAQSS DRSMVWTICP FCSVRYKSYI SLLNKPTRCH SCYLKFFASK SVVKGTPTKD KATQTSFSTT EKSVSSQKQI
0801: TRSSLVAPTP KSHAPTPKGQ TPTPKSHQVQ PQTAPSSLSP RFCAMCPFCK LKYRFPIKWT NKWFVCKCKK KFKTVEVSSS SLQQKTTTSK NQKESSPGLS
0901: CAVKVGEKRK RNECVESYNA GNRSALHKNK RVTSDNVVDN NRRGFNDNGD AGRQEESGWG KQLHQVNCSE ADRPEVTTLP NVISNNQKLN EKNKTPGLCD
1001: SGSGDALPVQ PKMSECAGLK FNDFNKRRED AKFSECQAWA LYDKADGMPR QYALIRKVSS PSFGLRITYL EPDPVDEKEI QWFEEDLPVS VGNFRFGKNQ
1101: NTKDLSIFSH AIRCQGSIMT GNFTSITCKR TNSGHFTVSP RKGETWALFK NWDIIKWSSE PDSHRSFEYE FVQILSDYAD GAGVYVSYLH KAKGFASVFF
1201: RVGTGPEDIL LILPHSLYRF SHRIPSFKLT GFKGKDAYEL DQAALPKTIL PTNSVSESNR KRKGQAIYFA RKGNVFKTGQ IWSFYSGNDD LPLHYCKIQK
1301: ITYTQVLEQE PVLKLHISRL KKATPSPKDV IDWEDGKMPL GCGTYYPKTV LEIITPDAVS HQVLLLGRES GHDRGEFYEI SWFKEVKKYQ HYDDDGWAEP
1401: IFTIPKTERL RFSHQVPASR VTKERFGDLE DLFKVESRAL PINLLGH
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.