Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024236.1-P | Field mustard | nucleus | 77.13 | 93.48 |
| CDX92856 | Canola | nucleus | 76.01 | 72.13 |
| AT4G27980.2 | Thale cress | cytosol | 65.25 | 48.26 |
| PGSC0003DMT400057888 | Potato | cytosol | 14.57 | 32.83 |
| CDY41935 | Canola | cytosol | 33.18 | 27.82 |
| CDX74108 | Canola | cytosol | 12.33 | 27.23 |
| CDY27796 | Canola | cytosol | 31.17 | 26.28 |
| PGSC0003DMT400089411 | Potato | cytosol | 12.78 | 25.45 |
| CDY27811 | Canola | nucleus | 25.11 | 23.38 |
| CDX88917 | Canola | nucleus | 15.7 | 21.08 |
| CDX92586 | Canola | nucleus | 13.68 | 17.43 |
| Solyc10g007630.1.1 | Tomato | cytosol | 18.61 | 17.08 |
| PGSC0003DMT400057893 | Potato | cytosol | 18.16 | 16.74 |
| CDY41917 | Canola | nucleus | 35.65 | 16.63 |
| PGSC0003DMT400054841 | Potato | cytosol | 18.39 | 16.6 |
| Solyc01g098330.1.1 | Tomato | nucleus | 15.02 | 16.34 |
| PGSC0003DMT400057894 | Potato | cytosol | 13.9 | 15.98 |
| CDX86172 | Canola | nucleus | 21.52 | 15.26 |
| CDX80667 | Canola | nucleus | 22.65 | 15.19 |
| CDX70837 | Canola | mitochondrion | 16.37 | 14.48 |
| Solyc01g098310.1.1 | Tomato | cytosol | 14.8 | 14.47 |
| CDX88918 | Canola | cytosol | 17.04 | 14.29 |
| CDX70843 | Canola | extracellular, golgi | 17.26 | 14.23 |
| CDY51818 | Canola | nucleus | 12.56 | 14.14 |
| CDY24701 | Canola | nucleus | 18.61 | 14.09 |
| PGSC0003DMT400038431 | Potato | nucleus | 24.22 | 13.72 |
| KRG92798 | Soybean | cytosol | 21.75 | 13.68 |
| CDY13918 | Canola | nucleus | 17.26 | 13.44 |
| Solyc08g029220.1.1 | Tomato | nucleus | 23.77 | 13.43 |
| CDY08056 | Canola | nucleus | 18.83 | 13.38 |
| GSMUA_Achr11P... | Banana | nucleus | 19.51 | 13.3 |
| CDY05255 | Canola | nucleus | 19.73 | 13.29 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 19.06 | 13.22 |
| CDX88920 | Canola | nucleus | 17.26 | 13.1 |
| CDX76994 | Canola | nucleus | 16.82 | 12.89 |
| CDX74632 | Canola | cytosol | 16.82 | 12.78 |
| CDY47298 | Canola | cytosol | 16.59 | 12.67 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 21.97 | 12.66 |
| CDX70840 | Canola | nucleus | 16.37 | 12.5 |
| CDY13919 | Canola | nucleus | 13.0 | 12.29 |
| CDX92582 | Canola | nucleus | 22.87 | 12.11 |
| CDY49460 | Canola | nucleus | 17.49 | 11.96 |
| CDY35353 | Canola | cytosol | 16.59 | 11.88 |
| CDY32121 | Canola | nucleus | 12.33 | 11.83 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 17.49 | 11.64 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 18.83 | 11.55 |
| CDY40464 | Canola | nucleus | 12.33 | 11.46 |
| CDY19683 | Canola | cytosol | 17.71 | 11.4 |
| Os11t0574200-00 | Rice | cytosol | 8.3 | 11.31 |
| CDX76752 | Canola | nucleus | 15.47 | 11.15 |
| CDX99992 | Canola | cytosol | 23.32 | 11.05 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 19.73 | 10.93 |
| CDY11521 | Canola | nucleus | 14.35 | 10.81 |
| CDY19714 | Canola | nucleus | 23.32 | 10.81 |
| PGSC0003DMT400057887 | Potato | cytosol | 20.4 | 10.81 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 21.08 | 10.8 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 10.09 | 10.79 |
| Solyc01g098250.2.1 | Tomato | nucleus | 23.99 | 10.78 |
| Solyc01g098340.2.1 | Tomato | cytosol | 19.06 | 10.62 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 20.4 | 10.53 |
| CDX88924 | Canola | plastid | 16.59 | 10.47 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 20.18 | 10.36 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 19.96 | 10.31 |
| Os01t0375100-01 | Rice | nucleus | 22.65 | 10.02 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 20.63 | 10.01 |
| Zm00001d052947_P001 | Maize | plastid | 19.28 | 9.94 |
| EES08665 | Sorghum | nucleus | 15.02 | 9.87 |
| Zm00001d040846_P001 | Maize | cytosol | 20.63 | 9.83 |
| CDY15046 | Canola | nucleus | 15.02 | 9.71 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 19.96 | 9.68 |
| CDX93081 | Canola | nucleus | 15.02 | 9.67 |
| PGSC0003DMT400057904 | Potato | nucleus | 23.32 | 9.62 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 19.28 | 9.6 |
| EER88793 | Sorghum | cytosol | 20.18 | 9.49 |
| CDY27809 | Canola | nucleus | 21.08 | 9.48 |
| KRG96896 | Soybean | cytosol | 22.42 | 9.45 |
| KRH68628 | Soybean | cytosol | 22.42 | 9.37 |
| EES00793 | Sorghum | cytosol | 20.4 | 9.31 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 19.73 | 9.27 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 19.96 | 9.12 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 21.08 | 9.09 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 19.73 | 9.02 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 19.73 | 9.02 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 20.63 | 8.99 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 20.63 | 8.98 |
| Os06t0535300-01 | Rice | nucleus | 20.4 | 8.94 |
| Zm00001d008412_P001 | Maize | cytosol | 20.18 | 8.83 |
| CDY60893 | Canola | cytosol | 3.14 | 8.81 |
| CDY60894 | Canola | cytosol | 3.14 | 8.81 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 20.4 | 8.8 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 20.4 | 8.8 |
| Os11t0578100-00 | Rice | cytosol | 20.63 | 8.74 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 19.06 | 8.72 |
| KXG32106 | Sorghum | cytosol | 19.73 | 8.7 |
| Zm00001d008413_P001 | Maize | cytosol | 19.73 | 8.64 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 21.08 | 8.57 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 10.31 | 8.52 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 20.85 | 8.46 |
| KXG28768 | Sorghum | nucleus | 18.39 | 8.41 |
| Os11t0573800-00 | Rice | nucleus | 17.26 | 8.39 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 15.92 | 8.31 |
| CDY41919 | Canola | nucleus, plastid | 21.75 | 8.14 |
| EES09993 | Sorghum | nucleus | 19.96 | 8.07 |
| EER98396 | Sorghum | nucleus | 20.63 | 8.06 |
| CDY34931 | Canola | cytosol | 4.04 | 8.0 |
| Zm00001d019461_P002 | Maize | cytosol | 19.96 | 7.97 |
| CDX74082 | Canola | cytosol | 4.04 | 7.96 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 20.18 | 7.96 |
| OQU83710 | Sorghum | cytosol | 17.26 | 7.91 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 19.96 | 7.47 |
| OQU83709 | Sorghum | cytosol | 19.28 | 7.4 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 17.49 | 7.39 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 19.73 | 7.38 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 19.28 | 7.23 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 19.06 | 7.1 |
| CDY27107 | Canola | nucleus | 4.93 | 6.01 |
| CDX92583 | Canola | mitochondrion, plastid | 4.26 | 5.48 |
| CDY12382 | Canola | nucleus | 4.48 | 5.46 |
| CDX70841 | Canola | nucleus | 16.14 | 4.98 |
| CDX88919 | Canola | cytosol | 17.04 | 4.81 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.79 | 4.6 |
| CDY12569 | Canola | cytosol | 3.36 | 4.19 |
| CDX76474 | Canola | cytosol | 2.24 | 4.17 |
| KRH34004 | Soybean | cytosol | 2.91 | 4.09 |
| CDX76475 | Canola | cytosol | 1.79 | 3.88 |
| CDX99362 | Canola | nucleus | 2.47 | 3.86 |
| KRH34003 | Soybean | cytosol | 2.47 | 3.78 |
| CDY60890 | Canola | cytosol | 2.02 | 3.72 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 1.79 | 3.64 |
| CDX99360 | Canola | cytosol | 2.69 | 3.6 |
| CDX78942 | Canola | cytosol | 2.47 | 3.59 |
| CDX78941 | Canola | nucleus | 4.26 | 3.44 |
| CDX74107 | Canola | cytosol | 2.02 | 3.36 |
| CDY09330 | Canola | cytosol | 1.57 | 3.11 |
| CDX76473 | Canola | cytosol | 1.57 | 2.89 |
| CDX99361 | Canola | cytosol | 0.45 | 1.37 |
| CDY31307 | Canola | cytosol | 0.22 | 1.09 |
| CDX92584 | Canola | mitochondrion | 0.67 | 0.86 |
| CDX76476 | Canola | cytosol | 0.0 | 0.0 |
| CDY08035 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY29872 | EnsemblPlantsGene:GSBRNA2T00044319001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 |
| PFAM:PF11926 | ProteinID:CDY29872 | ProteinID:CDY29872.1 | SEG:seg | UniParc:UPI0004EE8C0F | UniProt:A0A078GXF2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g48930DBnaA03g48930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXF2]
Coordinates
chrLK032245:+:246745..248085
Molecular Weight (calculated)
51424.2 Da
IEP (calculated)
5.220
GRAVY (calculated)
-0.722
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFDMIQVLE ASLLGLVIER QTEVAVRKKL EDVTSECEKK KDEAKLVFES IHEKLCGLEK AEKYFDVKQR VKIERLSSLE EAIKVIYAEL KRKEERFELK
101: QKEEADRWRE ETELKRKDLE IREKTLEERM KELQLKQMVL DERSKQNAET RKRSNHEVEH DNGAGSLTPP AKKHKPEEAD LACASKDGDI GETVCKDKSD
201: KDPKPLTCPD KKFNGFGKSM SSFAVDQVWA LYDPRDDMPR IYAQIRRIFS SQFSLQVTLL EHVETTKEEK SILSSACGRF EYGDTEIKSH LLFAHEMDNI
301: KCDKSVIVNP RKGETWALFR DWDISWKCHS DLLDPPYRYD LVEVITEFDD KLGISVAYMG RVEGFESVLN RVEQHGLIKI ICPGEMQRFS HKVPPGSFKL
401: DPAAAQGYDP VLEEVVDTRI KSKECDKAPT AETQEGSTKD QPIILE
101: QKEEADRWRE ETELKRKDLE IREKTLEERM KELQLKQMVL DERSKQNAET RKRSNHEVEH DNGAGSLTPP AKKHKPEEAD LACASKDGDI GETVCKDKSD
201: KDPKPLTCPD KKFNGFGKSM SSFAVDQVWA LYDPRDDMPR IYAQIRRIFS SQFSLQVTLL EHVETTKEEK SILSSACGRF EYGDTEIKSH LLFAHEMDNI
301: KCDKSVIVNP RKGETWALFR DWDISWKCHS DLLDPPYRYD LVEVITEFDD KLGISVAYMG RVEGFESVLN RVEQHGLIKI ICPGEMQRFS HKVPPGSFKL
401: DPAAAQGYDP VLEEVVDTRI KSKECDKAPT AETQEGSTKD QPIILE
001: MLKPKVLLVP GEDTPAQKPP LVSTEDQTQE RVYVSENMAM QGDSVESDVT EQNSEGYLKI LDKIQAKSSS IFEFSLQFDD VVASLEKKEE RLRVVEMKEK
101: EIGLLEESIS RRLSVLEEKE IETDLRLVIE ASIMRLVLEK QSEDLVTQLK TEENKLGLFL RSTTKKLEEL VSEFDGRKEE ACRVSEKLCE LEKAEKEFHL
201: KQRAETERRN EESEAREKDL RALEEAVKEK TAELKRKEET LELKMKEEAE KLREETELMR KGLEIKEKTL EKRLKELELK QMELEETSRP QLVEAESRKR
301: SNLEIEPPLL VKNDSDADSC TPQAKKQKSQ EANDGDIEGI VCTDKSYEDP NSLTCPDTKL NDFSKSMSSF AVDQVWALYD PRDDMPRNYA QIREIFESQL
401: SLQVTLLEHV KTTKDEQSIL SGCGRFEYGD TEIKSHLMFA HEMDHIKSAE EVIVNPRKGE TWALFSDWNA SWNSHLELQE LPYRYDFVEV ISEFDDLIGI
501: QVAYMGRVEG YESVFNHAEQ YGCIKIVIPP AEMQRFSHKV ESVKLSGKEE EGIPFRSFKL NPAAMPRYYH VLEEVVETEI QIKDPTVVHQ NGSTKDLPII
601: ID
101: EIGLLEESIS RRLSVLEEKE IETDLRLVIE ASIMRLVLEK QSEDLVTQLK TEENKLGLFL RSTTKKLEEL VSEFDGRKEE ACRVSEKLCE LEKAEKEFHL
201: KQRAETERRN EESEAREKDL RALEEAVKEK TAELKRKEET LELKMKEEAE KLREETELMR KGLEIKEKTL EKRLKELELK QMELEETSRP QLVEAESRKR
301: SNLEIEPPLL VKNDSDADSC TPQAKKQKSQ EANDGDIEGI VCTDKSYEDP NSLTCPDTKL NDFSKSMSSF AVDQVWALYD PRDDMPRNYA QIREIFESQL
401: SLQVTLLEHV KTTKDEQSIL SGCGRFEYGD TEIKSHLMFA HEMDHIKSAE EVIVNPRKGE TWALFSDWNA SWNSHLELQE LPYRYDFVEV ISEFDDLIGI
501: QVAYMGRVEG YESVFNHAEQ YGCIKIVIPP AEMQRFSHKV ESVKLSGKEE EGIPFRSFKL NPAAMPRYYH VLEEVVETEI QIKDPTVVHQ NGSTKDLPII
601: ID
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT4G27980]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.