Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G077700.1 | Wheat | cytosol | 92.48 | 92.58 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 53.82 | 86.11 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 79.63 | 85.47 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 82.75 | 82.28 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 70.02 | 65.83 |
| PGSC0003DMT400057888 | Potato | cytosol | 9.84 | 42.93 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 48.26 | 42.73 |
| KXG32106 | Sorghum | cytosol | 47.57 | 40.65 |
| Zm00001d008412_P001 | Maize | cytosol | 46.06 | 39.06 |
| Zm00001d008413_P001 | Maize | cytosol | 45.72 | 38.8 |
| Os06t0535300-01 | Rice | nucleus | 45.14 | 38.31 |
| PGSC0003DMT400089411 | Potato | cytosol | 9.49 | 36.61 |
| Bra001194.1-P | Field mustard | cytosol | 8.1 | 34.65 |
| CDX74108 | Canola | cytosol | 7.99 | 34.16 |
| Bra039476.1-P | Field mustard | cytosol | 8.1 | 33.98 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 9.84 | 31.14 |
| PGSC0003DMT400058788 | Potato | nucleus | 16.9 | 29.86 |
| PGSC0003DMT400094016 | Potato | nucleus | 9.84 | 29.01 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 25.93 | 28.94 |
| CDX70837 | Canola | mitochondrion | 16.09 | 27.58 |
| GSMUA_Achr11P... | Banana | nucleus | 20.83 | 27.52 |
| Bra006478.1-P | Field mustard | nucleus | 16.55 | 26.88 |
| CDX88918 | Canola | cytosol | 16.55 | 26.88 |
| CDX88917 | Canola | nucleus | 10.3 | 26.81 |
| Bra006479.1-P | Field mustard | cytosol | 16.67 | 26.09 |
| CDX70843 | Canola | extracellular, golgi | 16.09 | 25.69 |
| CDY13918 | Canola | nucleus | 17.01 | 25.65 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 21.53 | 25.58 |
| Bra002183.1-P | Field mustard | nucleus | 16.78 | 25.53 |
| PGSC0003DMT400086601 | Potato | cytosol | 5.79 | 24.88 |
| Bra006476.1-P | Field mustard | nucleus | 16.9 | 24.83 |
| CDX88920 | Canola | nucleus | 16.9 | 24.83 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 23.5 | 24.31 |
| CDX70840 | Canola | nucleus | 15.97 | 23.63 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 24.42 | 23.55 |
| CDX92582 | Canola | nucleus | 22.8 | 23.4 |
| Bra024236.1-P | Field mustard | nucleus | 9.95 | 23.37 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 27.89 | 23.31 |
| PGSC0003DMT400057894 | Potato | cytosol | 10.3 | 22.94 |
| PGSC0003DMT400058792 | Potato | nucleus | 24.19 | 22.79 |
| Solyc01g098340.2.1 | Tomato | cytosol | 21.06 | 22.75 |
| KRH11282 | Soybean | nucleus | 25.46 | 22.73 |
| KRH21004 | Soybean | nucleus | 25.46 | 22.73 |
| Solyc01g067780.1.1 | Tomato | cytosol | 23.73 | 22.7 |
| KRH50936 | Soybean | nucleus | 25.0 | 22.55 |
| CDX92586 | Canola | nucleus | 9.03 | 22.29 |
| PGSC0003DMT400057887 | Potato | cytosol | 21.41 | 21.97 |
| PGSC0003DMT400057893 | Potato | cytosol | 12.27 | 21.9 |
| Solyc01g098250.2.1 | Tomato | nucleus | 24.31 | 21.15 |
| CDX88924 | Canola | plastid | 17.25 | 21.07 |
| Bra006473.1-P | Field mustard | plastid | 17.01 | 20.91 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 25.12 | 20.79 |
| CDY13919 | Canola | nucleus | 11.34 | 20.76 |
| Solyc01g098330.1.1 | Tomato | nucleus | 9.72 | 20.49 |
| CDY29872 | Canola | cytosol | 10.53 | 20.4 |
| PGSC0003DMT400057904 | Potato | nucleus | 25.35 | 20.26 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 25.69 | 20.24 |
| CDY24701 | Canola | nucleus | 13.66 | 20.03 |
| Solyc01g098310.1.1 | Tomato | cytosol | 10.53 | 19.96 |
| CDY08056 | Canola | nucleus | 14.47 | 19.9 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 26.97 | 19.55 |
| Bra039477.1-P | Field mustard | plastid | 12.15 | 19.52 |
| KRH68628 | Soybean | cytosol | 23.96 | 19.4 |
| Solyc10g007630.1.1 | Tomato | cytosol | 10.76 | 19.14 |
| KRG96896 | Soybean | cytosol | 23.38 | 19.09 |
| TraesCS3B01G475500.1 | Wheat | cytosol | 16.55 | 18.99 |
| Bra020757.1-P | Field mustard | nucleus | 14.24 | 18.84 |
| PGSC0003DMT400054841 | Potato | cytosol | 10.76 | 18.83 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 24.77 | 18.31 |
| CDX92856 | Canola | nucleus | 9.95 | 18.3 |
| CDY05255 | Canola | nucleus | 14.0 | 18.28 |
| KRG92798 | Soybean | cytosol | 14.93 | 18.19 |
| PGSC0003DMT400038431 | Potato | nucleus | 16.44 | 18.04 |
| CDY27811 | Canola | nucleus | 9.95 | 17.95 |
| CDY19714 | Canola | nucleus | 19.91 | 17.88 |
| CDX99992 | Canola | cytosol | 19.44 | 17.85 |
| Solyc08g029220.1.1 | Tomato | nucleus | 16.09 | 17.62 |
| CDY27809 | Canola | nucleus | 19.56 | 17.04 |
| CDY27796 | Canola | cytosol | 9.72 | 15.88 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 13.54 | 15.77 |
| Bra039461.1-P | Field mustard | cytosol | 9.72 | 15.76 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 7.52 | 15.59 |
| CDY41935 | Canola | cytosol | 9.38 | 15.23 |
| CDX80667 | Canola | nucleus | 11.69 | 15.19 |
| Bra009972.1-P | Field mustard | nucleus | 11.0 | 15.1 |
| CDX86172 | Canola | nucleus | 11.0 | 15.1 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 11.92 | 14.59 |
| CDY41919 | Canola | nucleus, plastid | 19.91 | 14.44 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 11.57 | 13.77 |
| Bra002182.1-P | Field mustard | nucleus | 16.44 | 13.09 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 10.07 | 12.22 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 11.23 | 11.36 |
| Bra039474.1-P | Field mustard | nucleus | 19.1 | 10.81 |
| Bra006477.1-P | Field mustard | cytosol | 17.13 | 10.76 |
| CDX74107 | Canola | cytosol | 3.24 | 10.45 |
| CDY41917 | Canola | nucleus | 11.11 | 10.04 |
| CDX70841 | Canola | nucleus | 16.2 | 9.68 |
| CDX88919 | Canola | cytosol | 16.78 | 9.17 |
| KRH34004 | Soybean | cytosol | 3.24 | 8.81 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 2.31 | 7.27 |
| KRH34003 | Soybean | cytosol | 2.31 | 6.87 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G095100.1 | EnsemblPlantsGene:TraesCS2B01G095100 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2B:+:55170229..55180965
Molecular Weight (calculated)
99130.8 Da
IEP (calculated)
5.792
GRAVY (calculated)
-0.482
Length
864 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLHNTCLQE QLSGSNSARP QTFWTSCPAC RYRYEYYHEI SQKTVRCQNC SKAFVAHVLT DQPVHSGPEQ SVWKNAGVFS EIRLIRKFKP GQIWALYSDI
101: DKYPNCYAFI EKVELQNNEV QTRWLEVCPD GELEKISIED RTVGCGTYKV ATTDGIMIYT DMKSFSHRVN AIFTGRRNSY EIYPRKDEVW ALLKGWDIGW
201: SSDAHNQKKY KYEVVQVLSD FTTGTSITVM PLVKIKVFVS LFMQSKEATP YLIRQDDTIW FSHCIPYRLM GAAESEGIPE GALELDPAAL PLNLEQPHVR
301: VISESRSVKG SEFDAAYAGS SRGNKPRKES EGVGERQHAT CMNAGIFAKT SVVENRYHNT PSIVEGMDVA EESDDVQAEV LCPEFFDFDQ LRDVSRFRRN
401: QIWAVYDSQC CMPRFYARIT KVRRAPKFEV HFVLLEFDPR NKAEVAWSRG ELPVACGHFK HGASHTAKET KIFSQIISYE KSRTRNSFEV YPKKGEVWAL
501: FKGWDIGWSS DAKNHTDFQY EVVQIVSDFT TSTSIIAMPL VKLRGFVSLF TGLEEATPYV IPQDNTLRFS HCVPYHWMEG TERDGIPEGA VELDPDALPP
601: NLEDAFASVV PESIYTHSAV QDSTDVYEES DDIIQEEYEC AESEFHEFTE MRSLDKLKPG QIWALYNDMD KFPNYYAGIR KVDLKNNKVQ VRWLYVSPRG
701: EEEKRLVNED RPVGCGIFTV SGENDAIKTY TGTQSFSHPV CSSPTGREKE FEIIPLPREI WAVYKDWRAG WTAHDFKNCD YELVEILTHT DSSIQVKLLR
801: KVDGHRTVFR REPSVETICK DEYLKFSHQI PRFHLTNEKG GKLRGCLELD PFSVPERFLG IDSV
101: DKYPNCYAFI EKVELQNNEV QTRWLEVCPD GELEKISIED RTVGCGTYKV ATTDGIMIYT DMKSFSHRVN AIFTGRRNSY EIYPRKDEVW ALLKGWDIGW
201: SSDAHNQKKY KYEVVQVLSD FTTGTSITVM PLVKIKVFVS LFMQSKEATP YLIRQDDTIW FSHCIPYRLM GAAESEGIPE GALELDPAAL PLNLEQPHVR
301: VISESRSVKG SEFDAAYAGS SRGNKPRKES EGVGERQHAT CMNAGIFAKT SVVENRYHNT PSIVEGMDVA EESDDVQAEV LCPEFFDFDQ LRDVSRFRRN
401: QIWAVYDSQC CMPRFYARIT KVRRAPKFEV HFVLLEFDPR NKAEVAWSRG ELPVACGHFK HGASHTAKET KIFSQIISYE KSRTRNSFEV YPKKGEVWAL
501: FKGWDIGWSS DAKNHTDFQY EVVQIVSDFT TSTSIIAMPL VKLRGFVSLF TGLEEATPYV IPQDNTLRFS HCVPYHWMEG TERDGIPEGA VELDPDALPP
601: NLEDAFASVV PESIYTHSAV QDSTDVYEES DDIIQEEYEC AESEFHEFTE MRSLDKLKPG QIWALYNDMD KFPNYYAGIR KVDLKNNKVQ VRWLYVSPRG
701: EEEKRLVNED RPVGCGIFTV SGENDAIKTY TGTQSFSHPV CSSPTGREKE FEIIPLPREI WAVYKDWRAG WTAHDFKNCD YELVEILTHT DSSIQVKLLR
801: KVDGHRTVFR REPSVETICK DEYLKFSHQI PRFHLTNEKG GKLRGCLELD PFSVPERFLG IDSV
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.