Factsheet for TraesCS5B01G508500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G365000.1	Wheat	cytosol	91.27	92.28
HORVU5Hr1G116070.3	Barley	cytosol	80.73	86.72
TraesCS5D01G508400.1	Wheat	plastid	93.09	71.71
Os03t0831000-00	Rice	plastid	63.64	67.31
KXG37199	Sorghum	cytosol	58.55	58.76
Zm00001d034749_P001	Maize	plastid	56.0	54.8
GSMUA_Achr3P24140_001	Banana	nucleus	40.73	48.7
GSMUA_Achr1P24750_001	Banana	cytosol	35.27	39.43
CDY08035	Canola	cytosol	13.82	38.38
KRH50796	Soybean	cytosol, nucleus, peroxisome	30.18	33.33
KRH12028	Soybean	cytosol	31.64	32.22
KRH02299	Soybean	cytosol	31.27	32.09
CDY34931	Canola	cytosol	26.18	32.0
CDX74082	Canola	cytosol	26.18	31.86
KRH37055	Soybean	cytosol	31.27	31.85
Solyc01g065570.2.1	Tomato	cytosol	27.27	31.51
Bra001216.1-P	Field mustard	cytosol	25.45	30.97
AT3G06778.1	Thale cress	cytosol	25.45	30.57
PGSC0003DMT400003010	Potato	nucleus	28.0	30.32
Bra040290.1-P	Field mustard	cytosol, mitochondrion	20.0	30.22
VIT_05s0077g01780.t01	Wine grape	nucleus	21.82	27.52
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	4.0	16.92
TraesCS2B01G301100.1	Wheat	cytosol	20.0	7.79
TraesCS3B01G470100.1	Wheat	nucleus	17.82	6.75
TraesCS3B01G607500.1	Wheat	cytosol	17.45	6.47
TraesCS4B01G319100.1	Wheat	cytosol	16.36	6.32
TraesCS6B01G194500.1	Wheat	cytosol	20.73	5.84
TraesCS4B01G101500.1	Wheat	cytosol	18.91	5.8
TraesCS3B01G244000.4	Wheat	nucleus	21.09	5.61
TraesCS3B01G475500.1	Wheat	cytosol	14.55	5.31
TraesCS2B01G099600.2	Wheat	nucleus	20.73	5.2
TraesCS1B01G054900.1	Wheat	nucleus	21.82	5.03
TraesCS2B01G366100.1	Wheat	cytosol	8.73	2.61
TraesCS2B01G095100.1	Wheat	cytosol	7.27	2.31

Protein Annotations

EnsemblPlants:TraesCS5B01G508500.1	EnsemblPlantsGene:TraesCS5B01G508500	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44137	PFAM:PF00226	PFscan:PS50076
PFscan:PS51257	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
TIGR:cd06257	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:673679922..673681823

Molecular Weight (calculated)

30396.7 Da

IEP (calculated)

10.526

GRAVY (calculated)

-0.797

Length

275 amino acids

Sequence
(BLAST)

001: MADAAGKAQA AREVCAASAA FASCPHRRRS PRRAIFVDWY LVLAIGEAAS EDAIKRRYRH LALQLHPDKN RHPKAEVAFK LVSEAHACLT DKARRRAFDA
101: ERATAFCTAC HDRARAATMP CAPTKRRTGD RRTPPSSAAA SAQQQQHNKA RASVAKAKQQ GGGGRPPAPA TQALREVQNR LRDECRVIDD CLRANAAGAR
201: RRQSFPLFDP SDRQRFPDYP HARPPPSFAE CRPFEEEELG AGHGHQSWCT NGSCESPVYQ VRTAPERAAS TKRPW

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.