Factsheet for TraesCS3B01G470100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G122400.1
TraesCS2B01G144600.1
TraesCS4A01G165000.4
TraesCS4A01G171800.3
TraesCS4B01G145600.4
TraesCS4D01G143400.3
TraesCS4D01G150000.4
TraesCS5A01G040700.1
TraesCS5A01G366000.1
TraesCS5B01G041900.1
TraesCS5B01G067400.1
TraesCS5B01G368400.1
TraesCS5D01G071600.1
TraesCS5D01G071700.1
TraesCS5D01G375600.1
TraesCS6A01G074100.1
TraesCSU01G068100.3
TraesCSU01G086500.1
TraesCSU01G123400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	TraesCS2A01G122400.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS2B01G144600.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS4A01G165000.4	AT4G36690.1	21798944
AT2G05230.1	TraesCS4A01G171800.3	AT4G36690.1	21798944
AT2G05230.1	TraesCS4B01G145600.4	AT4G36690.1	21798944
AT2G05230.1	TraesCS4D01G143400.3	AT4G36690.1	21798944
AT2G05230.1	TraesCS4D01G150000.4	AT4G36690.1	21798944
AT2G05230.1	TraesCS5A01G040700.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5A01G366000.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5B01G041900.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5B01G067400.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5B01G368400.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5D01G071600.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5D01G071700.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5D01G375600.1	AT4G36690.1	21798944
AT2G05230.1	TraesCSU01G068100.3	AT4G36690.1	21798944
AT2G05230.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT2G05230.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT2G05230.1	TraesCSU01G123400.1	AT5G60340.1	21798944
AT2G05250.1	TraesCS2A01G122400.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS2B01G144600.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS4A01G165000.4	AT4G36690.1	21798944
AT2G05250.1	TraesCS4A01G171800.3	AT4G36690.1	21798944
AT2G05250.1	TraesCS4B01G145600.4	AT4G36690.1	21798944
AT2G05250.1	TraesCS4D01G143400.3	AT4G36690.1	21798944
AT2G05250.1	TraesCS4D01G150000.4	AT4G36690.1	21798944
AT2G05250.1	TraesCS5A01G040700.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5A01G366000.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5B01G041900.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5B01G067400.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5B01G368400.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5D01G071600.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5D01G071700.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5D01G375600.1	AT4G36690.1	21798944
AT2G05250.1	TraesCSU01G068100.3	AT4G36690.1	21798944
AT2G05250.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT2G05250.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT2G05250.1	TraesCSU01G123400.1	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G095280.1	Barley	nucleus	63.22	91.8
TraesCS3A01G435100.1	Wheat	nucleus	96.28	88.37
Os01t0923800-01	Rice	nucleus	52.89	51.61
Zm00001d011997_P001	Maize	nucleus	53.31	47.08
Bra020958.1-P	Field mustard	cytosol	6.61	47.06
CDX76476	Canola	cytosol	6.61	47.06
KXG34016	Sorghum	nucleus	53.72	47.04
VIT_01s0010g03770.t01	Wine grape	cytosol	15.56	46.69
Bra031906.1-P	Field mustard	cytosol	5.79	45.65
CDY31307	Canola	cytosol	5.65	44.57
KRG89459	Soybean	cytosol	6.61	44.04
VIT_17s0000g01140.t01	Wine grape	cytosol	15.15	43.65
Solyc03g019630.1.1	Tomato	nucleus	9.37	43.59
PGSC0003DMT400039473	Potato	nucleus	8.82	43.24
CDX99361	Canola	cytosol	8.54	42.47
CDY60891	Canola	cytosol, mitochondrion, nucleus	9.78	40.8
Bra020957.1-P	Field mustard	cytosol	11.29	39.81
CDX76475	Canola	cytosol	11.16	39.32
KRH53452	Soybean	cytosol	35.54	37.28
KRH64496	Soybean	nucleus	35.26	36.99
Solyc03g007280.2.1	Tomato	cytosol	9.64	35.9
TraesCS3B01G607500.1	Wheat	cytosol	35.95	35.18
Bra034258.1-P	Field mustard	cytosol	29.2	34.25
VIT_16s0050g02590.t01	Wine grape	cytosol	34.99	34.19
PGSC0003DMT400023514	Potato	cytosol	34.3	33.88
CDY49460	Canola	nucleus	30.3	33.74
CDY35353	Canola	cytosol	28.93	33.71
VIT_01s0010g03760.t01	Wine grape	cytosol	37.88	33.66
CDY19683	Canola	cytosol	32.09	33.62
Bra003079.1-P	Field mustard	cytosol	32.78	33.57
CDX76994	Canola	nucleus	26.86	33.51
TraesCS2B01G301100.1	Wheat	cytosol	32.09	33.0
CDX99362	Canola	nucleus	12.95	32.98
CDY09330	Canola	cytosol	10.19	32.89
TraesCS4B01G319100.1	Wheat	cytosol	32.09	32.72
KRH18160	Soybean	nucleus	34.57	32.56
KRH14137	Soybean	nucleus	31.54	32.39
VIT_12s0057g00710.t01	Wine grape	cytosol	30.85	32.28
KRH16532	Soybean	cytosol	34.16	32.21
CDX76474	Canola	cytosol	10.61	32.08
CDY60893	Canola	cytosol	7.02	32.08
CDY60894	Canola	cytosol	7.02	32.08
KRH73997	Soybean	nucleus	31.13	32.06
KRH09248	Soybean	nucleus	34.02	31.71
CDY27107	Canola	nucleus	15.98	31.69
CDX76473	Canola	cytosol	10.47	31.41
AT2G25560.1	Thale cress	cytosol	28.24	31.25
CDX78942	Canola	cytosol	13.09	31.05
PGSC0003DMT400039476	Potato	nucleus	34.16	30.81
Bra038959.1-P	Field mustard	nucleus	16.25	30.65
PGSC0003DMT400059130	Potato	cytosol	32.78	30.59
CDY60890	Canola	cytosol	10.19	30.58
KRH38748	Soybean	nucleus	34.02	30.42
CDY12382	Canola	nucleus	15.29	30.33
Solyc01g044270.2.1	Tomato	cytosol	32.23	30.08
AT5G53150.3	Thale cress	cytosol	31.27	30.07
CDX76752	Canola	nucleus	25.48	29.89
KRH54176	Soybean	nucleus	32.51	29.76
Bra007790.1-P	Field mustard	nucleus	24.1	29.56
CDY11521	Canola	nucleus	24.1	29.56
Bra035378.1-P	Field mustard	cytosol	27.96	29.51
CDX99360	Canola	cytosol	13.5	29.43
AT5G50115.1	Thale cress	cytosol	19.56	29.28
PGSC0003DMT400085016	Potato	cytosol	5.23	29.23
VIT_17s0000g01150.t01	Wine grape	nucleus	35.54	29.12
CDY47298	Canola	cytosol	23.42	29.11
CDX74632	Canola	cytosol	23.42	28.96
AT2G05230.1	Thale cress	cytosol	28.1	28.9
AT2G05250.1	Thale cress	cytosol	28.1	28.9
KRH63773	Soybean	nucleus	32.23	28.78
Bra020955.1-P	Field mustard	cytosol	11.16	28.72
CDY60010	Canola	cytosol, mitochondrion, nucleus	8.68	28.64
AT5G37380.6	Thale cress	nucleus	16.94	28.54
PGSC0003DMT400048481	Potato	cytosol	30.58	28.35
Bra013179.1-P	Field mustard	nucleus	27.0	28.28
CDX93081	Canola	nucleus	27.0	28.28
CDY15046	Canola	nucleus	26.86	28.26
Solyc05g040050.1.1	Tomato	nucleus	30.44	28.22
PGSC0003DMT400015678	Potato	nucleus	30.58	28.17
Solyc07g047690.1.1	Tomato	nucleus	30.44	28.05
PGSC0003DMT400086295	Potato	mitochondrion	8.26	27.52
AT5G35753.1	Thale cress	cytosol	15.98	27.04
Solyc03g019640.1.1	Tomato	nucleus	34.02	26.59
Bra020956.1-P	Field mustard	nucleus	12.67	26.36
PGSC0003DMT400092645	Potato	cytosol	4.55	25.58
CDY12569	Canola	cytosol	12.26	24.86
AT4G19580.1	Thale cress	cytosol	10.61	24.68
Bra040300.1-P	Field mustard	cytosol	12.4	24.39
PGSC0003DMT400092668	Potato	cytosol	4.82	23.65
AT5G62780.1	Thale cress	cytosol	6.2	21.74
Bra013404.1-P	Field mustard	nucleus	12.95	21.08
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	8.13	20.7
Solyc01g057650.1.1	Tomato	cytosol	4.82	20.47
Bra013403.1-P	Field mustard	nucleus	15.01	20.11
CDX78941	Canola	nucleus	15.15	19.93
AT4G19570.1	Thale cress	nucleus	14.33	18.64
TraesCS4B01G101500.1	Wheat	cytosol	22.45	18.19
TraesCS6B01G194500.1	Wheat	cytosol	24.1	17.93
TraesCS5B01G508500.1	Wheat	cytosol	6.75	17.82
Solyc07g039220.1.1	Tomato	cytosol	8.13	16.71
TraesCS3B01G244000.4	Wheat	nucleus	23.55	16.54
TraesCS2B01G099600.2	Wheat	nucleus	22.86	15.13
PGSC0003DMT400080343	Potato	cytosol	12.81	15.07
PGSC0003DMT400096427	Potato	cytosol	12.67	14.96
Solyc01g057750.1.1	Tomato	cytosol	12.67	14.84
TraesCS1B01G054900.1	Wheat	nucleus	23.14	14.09
TraesCS3B01G475500.1	Wheat	cytosol	13.77	13.28
TraesCS2B01G095100.1	Wheat	cytosol	13.77	11.57
TraesCS2B01G366100.1	Wheat	cytosol	14.33	11.32
Bra002184.1-P	Field mustard	cytosol	0.14	0.38

Protein Annotations

EnsemblPlants:TraesCS3B01G470100.1	EnsemblPlantsGene:TraesCS3B01G470100	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44137	PANTHER:PTHR44137:SF5	PFAM:PF00226
PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
TIGR:cd06257	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:717680396..717682576

Molecular Weight (calculated)

82018.5 Da

IEP (calculated)

9.194

GRAVY (calculated)

-0.863

Length

726 amino acids

Sequence
(BLAST)

001: MECNRDEAIR SKEMAERKYK VNDFVGARKL ALKAKALFDL EGLDQMIVAL DVHLRSMTKF EGENDWYGIL EVSTWADEET IRKQYKKLAL QTHPDKNSFV
101: GADSAFNLIS DAWNVLSDKN RRILHDQRRH MSSLRVLQNN SQVSVDNTSS SSMPSMNGFC RQNTGPASPP NVPPQNMPKL STFWTVCISC RMNFEYPRQY
201: VNQYMICPEC HKPFKAEEVP PPPTSSHTYQ PKSMDTNTSR GRTACPGEGM AGTGASGSQN HHNPMQQRCS FQGSAAGAHT FSHSVQQTHG TVSGSPGSSI
301: PRKAAATKEK EAAKKRYKKV APQSTSSGLD GDSSSQNKAK RKARSTDRAS GAKRRKETSN CHVSAGSSFI KEMEKLDMRS LLINKMKLQL RDKLEEFNRK
401: KADMENGRKM QTSQRTNKAA TCSTSVDAKK MKRTQQSSSV HPEEDNGKKL TSERKRAEKR KHAGSEEMGS WEWKKPEIRF FYTRRSRREQ EPSPDEMLVP
501: DADFYAFGDH SGNSFQKDQV WATYDEEDGM PRYYALIQTV HSRRPFKVTF AFLKADNPDE FGASDWLSCG FSKTCGDYKP GASEDADELN KFSHLVTCQK
601: GAGRRIIRIL PRKGDIWALY QNWSADWDEL VPDETMYKYD LVQVLDSYSP SEGLSVMPIE KVPGFVSVFK PLSDPAKSRR IPEEEMTRFS HQVPFHILTG
701: EEAHNSPKGC YELDPGSTPK ELLQVV

Best Arabidopsis Sequence Match ( AT5G53150.1 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.