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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007790.1-P Field mustard nucleus 99.83 99.83
CDX76752 Canola nucleus 86.99 83.2
CDY35353 Canola cytosol 54.05 51.36
CDX76994 Canola nucleus 49.83 50.69
AT2G25560.1 Thale cress cytosol 55.91 50.46
CDX76476 Canola cytosol 7.77 45.1
CDY31307 Canola cytosol 6.76 43.48
CDX99361 Canola cytosol 10.64 43.15
CDY60891 Canola cytosol, mitochondrion, nucleus 12.33 41.95
CDX76475 Canola cytosol 14.02 40.29
CDY09330 Canola cytosol 12.67 33.33
GSMUA_Achr8P00660_001 Banana cytosol 33.78 33.22
CDX99362 Canola nucleus 15.37 31.93
CDX76473 Canola cytosol 13.01 31.82
CDY27107 Canola nucleus 19.59 31.69
CDX76474 Canola cytosol 12.84 31.67
CDY12382 Canola nucleus 19.43 31.42
CDY60893 Canola cytosol 8.28 30.82
CDY60894 Canola cytosol 8.28 30.82
CDY60890 Canola cytosol 12.5 30.58
CDY08035 Canola cytosol 5.07 30.3
GSMUA_Achr10P... Banana cytosol 30.41 29.36
GSMUA_Achr2P21160_001 Banana cytosol 26.35 29.0
CDX74107 Canola cytosol 13.01 28.73
TraesCS2A01G284200.2 Wheat cytosol 35.47 28.65
TraesCS2D01G283100.2 Wheat cytosol 35.3 28.51
EES10633 Sorghum cytosol 35.3 28.44
CDY19683 Canola cytosol 33.28 28.43
Zm00001d003948_P001 Maize cytosol 35.3 28.4
CDX78942 Canola cytosol 14.53 28.1
Zm00001d025584_P001 Maize cytosol 34.8 28.1
Zm00001d025585_P001 Maize cytosol 34.8 28.1
GSMUA_Achr11P... Banana cytosol 23.82 28.09
CDY15046 Canola nucleus 32.6 27.97
Zm00001d025238_P001 Maize cytosol 34.63 27.93
Os02t0510000-01 Rice cytosol 34.46 27.79
EES10933 Sorghum cytosol 33.95 27.76
CDX93081 Canola nucleus 32.43 27.71
TraesCS2B01G301100.1 Wheat cytosol 32.94 27.62
Os03t0401200-01 Rice cytosol 34.8 27.54
GSMUA_Achr3P02570_001 Banana nucleus 24.32 27.53
EES07899 Sorghum cytosol 34.12 27.48
OQU85000 Sorghum cytosol 33.78 27.47
CDY49460 Canola nucleus 30.24 27.45
TraesCS3B01G607500.1 Wheat cytosol 34.12 27.22
TraesCS3A01G536400.1 Wheat cytosol 33.95 27.09
TraesCS3D01G541800.1 Wheat cytosol 34.12 27.08
GSMUA_Achr6P12230_001 Banana nucleus 26.52 27.07
CDX99360 Canola cytosol 15.2 27.03
CDY60010 Canola cytosol, mitochondrion, nucleus 9.97 26.82
TraesCS5A01G493100.1 Wheat cytosol 34.12 26.54
Zm00001d050565_P001 Maize cytosol 28.55 26.24
HORVU1Hr1G001860.1 Barley nucleus 19.26 25.91
TraesCS4D01G315600.1 Wheat cytosol 33.28 25.89
TraesCS4B01G319100.1 Wheat cytosol 30.57 25.42
CDY47298 Canola cytosol 25.0 25.34
Os01t0923800-01 Rice nucleus 31.76 25.27
CDX74108 Canola cytosol 8.61 25.25
CDX74632 Canola cytosol 25.0 25.21
CDY12569 Canola cytosol 15.03 24.86
TraesCS3B01G470100.1 Wheat nucleus 29.56 24.1
CDX88917 Canola nucleus 13.51 24.1
CDY40464 Canola nucleus 19.43 23.96
CDY08056 Canola nucleus 24.66 23.25
Os04t0388800-01 Rice nucleus 23.48 23.24
CDY24701 Canola nucleus 22.97 23.09
TraesCS3A01G435100.1 Wheat nucleus 30.74 23.01
CDY32121 Canola nucleus 17.91 22.8
CDY34931 Canola cytosol 8.61 22.67
CDX74082 Canola cytosol 8.45 22.12
CDX86172 Canola nucleus 23.31 21.94
KXG34016 Sorghum nucleus 30.57 21.83
CDY05255 Canola nucleus 24.32 21.75
Zm00001d011997_P001 Maize nucleus 29.56 21.29
CDX80667 Canola nucleus 22.97 20.45
CDY13919 Canola nucleus 16.05 20.13
CDX78941 Canola nucleus 18.07 19.38
CDY41935 Canola cytosol 16.72 18.61
CDY27796 Canola cytosol 15.88 17.77
CDX92586 Canola nucleus 10.14 17.14
CDY19714 Canola nucleus 27.7 17.05
CDX99992 Canola cytosol 27.03 17.0
CDX92582 Canola nucleus 23.82 16.75
CDY51818 Canola nucleus 10.98 16.41
CDY13918 Canola nucleus 14.86 15.36
CDY27809 Canola nucleus 25.51 15.22
CDX92856 Canola nucleus 11.99 15.11
CDX70843 Canola extracellular, golgi 13.68 14.97
CDX88918 Canola cytosol 13.34 14.85
CDY29872 Canola cytosol 10.81 14.35
CDY27811 Canola nucleus 11.49 14.2
CDX70837 Canola mitochondrion 11.82 13.89
CDX88924 Canola plastid 15.54 13.01
CDY41919 Canola nucleus, plastid 25.51 12.68
CDX70840 Canola nucleus 12.5 12.67
CDX88920 Canola nucleus 12.16 12.24
CDY13917 Canola endoplasmic reticulum, extracellular, mitochondrion 7.26 10.31
CDX70844 Canola mitochondrion, plasma membrane 14.02 9.72
CDY41917 Canola nucleus 15.03 9.31
CDX70841 Canola nucleus 15.37 6.29
CDX88919 Canola cytosol 15.54 5.82
CDX92583 Canola mitochondrion, plastid 3.04 5.19
CDX92584 Canola mitochondrion 1.52 2.58
Protein Annotations
Gene3D:1.10.287.110MapMan:35.2UniProt:A0A078FE55EnsemblPlants:CDY11521ProteinID:CDY11521ProteinID:CDY11521.1
InterPro:DUF3444InterPro:DnaJ_domainInterPro:DnaJ_domain_CSEnsemblPlantsGene:GSBRNA2T00049602001InterPro:IPR001623InterPro:IPR036869
InterPro:J_dom_sfPFAM:PF00226PFAM:PF11926PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076
PANTHER:PTHR44137PANTHER:PTHR44137:SF4SMART:SM00271SUPFAM:SSF46565UniParc:UPI0004EDF884SEG:seg
Description
BnaA09g40870DBnaA09g40870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FE55]
Coordinates
chrLK032011:-:783488..785266
Molecular Weight (calculated)
65709.8 Da
IEP (calculated)
8.123
GRAVY (calculated)
-0.433
Length
592 amino acids
Sequence
(BLAST)
001: MDFYNKEEAN RAREAAVNKF MANDFAGARR FALKALSLDP EIVGITQMVA TFAMHLAAQH TINGEVDHYG VLGVHPQADD EAVKKRYKKL VFILHPDKNN
101: SIGADEAFKL VSKAFEVLSD KEKRAEYDSK RNFVVCEGRG ASSSKKGAAK GKTPKRGTKR ASDDASTSSA PPPAPPAPPA PPALGVVTTY DGTFWTVCIS
201: CKSQYEYHRI YLNQNLRCSH CRQPFIAVET PPPHSSIRKT FVEHQFHSLE WSAVTTTGTI TAAHDSQAVP RESTKRVAAA SPSTNPPKRR KEVVVEENAV
301: SAYIASSSSA PPKSNTARDF SNGELKNVLV KKSKPTIVSN LHDLITIDPE TEDVNMANEV SLCVVDPVRS LGALTINVPE EPNVCDFVKN RTQKPFRDNE
401: IWASNDLVEG TPRVYYMIDK VLSLDPFKMC ITRLTTNLLD SQRTCGVFRA RDSHICCLPN SFSHKVEAVK GDHGEFLIYP RTGEVWALYR NWPSEWNYPE
501: GYRAGKYDVV EVVEGYTEEY GVRVLPLLKV AGFSSVFRHY LGPKEITSFS KYELSRFSHQ MPSCLLTGKD PAGELGGCRQ LDAASSLEMQ PY
Best Arabidopsis Sequence Match ( AT2G25560.1 )
(BLAST)
001: MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI IYGDVDHYGV LGLNPEADDE IVRKRYRKLA VMLHPDRNKS
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
Arabidopsis Description
At2g25560/F13B15.22 [Source:UniProtKB/TrEMBL;Acc:Q9SLA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.