Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88920 | Canola | nucleus | 89.38 | 88.78 |
| CDX92586 | Canola | nucleus | 41.61 | 69.43 |
| CDY13918 | Canola | nucleus | 43.66 | 44.5 |
| CDX88917 | Canola | nucleus | 25.17 | 44.28 |
| CDX70837 | Canola | mitochondrion | 36.82 | 42.66 |
| PGSC0003DMT400057888 | Potato | cytosol | 14.04 | 41.41 |
| CDX88918 | Canola | cytosol | 37.67 | 41.35 |
| CDX92583 | Canola | mitochondrion, plastid | 24.32 | 40.92 |
| CDX70843 | Canola | extracellular, golgi | 37.67 | 40.67 |
| CDX74108 | Canola | cytosol | 13.01 | 37.62 |
| PGSC0003DMT400089411 | Potato | cytosol | 13.7 | 35.71 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 25.0 | 35.01 |
| CDX88924 | Canola | plastid | 41.61 | 34.37 |
| PGSC0003DMT400057894 | Potato | cytosol | 14.9 | 22.42 |
| CDX92582 | Canola | nucleus | 32.02 | 22.21 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 24.32 | 21.19 |
| Os11t0574200-00 | Rice | cytosol | 11.64 | 20.8 |
| CDY60893 | Canola | cytosol | 5.48 | 20.13 |
| CDY60894 | Canola | cytosol | 5.48 | 20.13 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 25.0 | 20.08 |
| CDY13919 | Canola | nucleus | 16.1 | 19.92 |
| PGSC0003DMT400057893 | Potato | cytosol | 16.27 | 19.63 |
| GSMUA_Achr11P... | Banana | nucleus | 21.23 | 18.96 |
| Solyc10g007630.1.1 | Tomato | cytosol | 15.75 | 18.93 |
| Solyc01g098340.2.1 | Tomato | cytosol | 25.86 | 18.88 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 27.57 | 18.85 |
| PGSC0003DMT400054841 | Potato | cytosol | 15.92 | 18.83 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 24.83 | 18.73 |
| Solyc01g098310.1.1 | Tomato | cytosol | 14.38 | 18.42 |
| PGSC0003DMT400057887 | Potato | cytosol | 25.68 | 17.81 |
| CDY27811 | Canola | nucleus | 14.38 | 17.54 |
| Zm00001d040846_P001 | Maize | cytosol | 27.91 | 17.41 |
| Solyc01g098250.2.1 | Tomato | nucleus | 29.45 | 17.32 |
| EES00793 | Sorghum | cytosol | 28.25 | 16.89 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 25.86 | 16.85 |
| CDY27796 | Canola | cytosol | 15.24 | 16.82 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 25.0 | 16.78 |
| EER88793 | Sorghum | cytosol | 27.23 | 16.77 |
| CDY41935 | Canola | cytosol | 15.24 | 16.73 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 26.03 | 16.54 |
| Zm00001d052947_P001 | Maize | plastid | 24.49 | 16.53 |
| Os01t0375100-01 | Rice | nucleus | 28.25 | 16.37 |
| CDY29872 | Canola | cytosol | 12.5 | 16.37 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 25.68 | 16.32 |
| CDX70841 | Canola | nucleus | 40.24 | 16.24 |
| CDX92856 | Canola | nucleus | 13.01 | 16.17 |
| CDY24701 | Canola | nucleus | 16.27 | 16.13 |
| Solyc01g098330.1.1 | Tomato | nucleus | 11.3 | 16.1 |
| CDY08056 | Canola | nucleus | 17.29 | 16.08 |
| CDX86172 | Canola | nucleus | 17.29 | 16.06 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 23.63 | 15.99 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 23.63 | 15.97 |
| CDY19714 | Canola | nucleus | 26.2 | 15.9 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 23.63 | 15.88 |
| CDY05255 | Canola | nucleus | 17.98 | 15.86 |
| PGSC0003DMT400057904 | Potato | nucleus | 29.28 | 15.82 |
| KRG92798 | Soybean | cytosol | 19.18 | 15.8 |
| KXG28768 | Sorghum | nucleus | 26.2 | 15.69 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 26.2 | 15.68 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 26.2 | 15.68 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 25.34 | 15.6 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 26.03 | 15.57 |
| OQU83710 | Sorghum | cytosol | 25.86 | 15.5 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 25.86 | 15.49 |
| Os06t0535300-01 | Rice | nucleus | 26.71 | 15.32 |
| CDX99992 | Canola | cytosol | 24.66 | 15.3 |
| KXG32106 | Sorghum | cytosol | 26.37 | 15.23 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 26.54 | 15.15 |
| CDX88919 | Canola | cytosol | 40.92 | 15.12 |
| Os11t0578100-00 | Rice | cytosol | 27.23 | 15.1 |
| CDX80667 | Canola | nucleus | 17.12 | 15.04 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 26.2 | 14.94 |
| Zm00001d008413_P001 | Maize | cytosol | 26.03 | 14.93 |
| Zm00001d008412_P001 | Maize | cytosol | 26.03 | 14.92 |
| KRH68628 | Soybean | cytosol | 27.05 | 14.81 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 26.2 | 14.8 |
| CDY51818 | Canola | nucleus | 9.93 | 14.65 |
| KRG96896 | Soybean | cytosol | 26.37 | 14.56 |
| CDY27809 | Canola | nucleus | 24.66 | 14.52 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 25.68 | 14.51 |
| PGSC0003DMT400038431 | Potato | nucleus | 19.18 | 14.23 |
| Solyc08g029220.1.1 | Tomato | nucleus | 19.18 | 14.2 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 25.0 | 14.12 |
| EER98396 | Sorghum | nucleus | 27.23 | 13.94 |
| CDX76994 | Canola | nucleus | 13.87 | 13.92 |
| Zm00001d019461_P002 | Maize | cytosol | 26.37 | 13.8 |
| CDY47298 | Canola | cytosol | 13.7 | 13.7 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 18.84 | 13.66 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 25.68 | 13.65 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 24.66 | 13.64 |
| CDX74632 | Canola | cytosol | 13.7 | 13.63 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 25.51 | 13.58 |
| EES09993 | Sorghum | nucleus | 25.34 | 13.42 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 14.73 | 13.37 |
| CDY49460 | Canola | nucleus | 14.9 | 13.34 |
| CDY35353 | Canola | cytosol | 14.21 | 13.32 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 25.68 | 13.26 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 26.71 | 13.02 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 26.54 | 13.0 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 26.37 | 12.92 |
| CDY19683 | Canola | cytosol | 15.24 | 12.84 |
| CDY40464 | Canola | nucleus | 10.45 | 12.71 |
| CDY32121 | Canola | nucleus | 10.1 | 12.69 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 25.68 | 12.61 |
| OQU83709 | Sorghum | cytosol | 25.0 | 12.56 |
| CDY11521 | Canola | nucleus | 12.67 | 12.5 |
| CDX76752 | Canola | nucleus | 12.84 | 12.12 |
| CDY41919 | Canola | nucleus, plastid | 24.66 | 12.09 |
| EES08665 | Sorghum | nucleus | 13.7 | 11.78 |
| CDY15046 | Canola | nucleus | 13.36 | 11.3 |
| CDX93081 | Canola | nucleus | 13.36 | 11.26 |
| Os11t0573800-00 | Rice | nucleus | 15.92 | 10.13 |
| CDY41917 | Canola | nucleus | 14.55 | 8.89 |
| CDX92584 | Canola | mitochondrion | 5.14 | 8.6 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 7.36 | 7.96 |
| CDY34931 | Canola | cytosol | 2.91 | 7.56 |
| CDX74082 | Canola | cytosol | 2.74 | 7.08 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 2.57 | 6.82 |
| CDX99362 | Canola | nucleus | 2.91 | 5.96 |
| CDY31307 | Canola | cytosol | 0.86 | 5.43 |
| CDX78941 | Canola | nucleus | 4.79 | 5.07 |
| CDY12382 | Canola | nucleus | 3.08 | 4.92 |
| CDY27107 | Canola | nucleus | 3.08 | 4.92 |
| CDX99361 | Canola | cytosol | 1.2 | 4.79 |
| CDY12569 | Canola | cytosol | 2.91 | 4.75 |
| CDX74107 | Canola | cytosol | 2.05 | 4.48 |
| CDX76474 | Canola | cytosol | 1.71 | 4.17 |
| CDY60890 | Canola | cytosol | 1.71 | 4.13 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.2 | 4.02 |
| CDX76476 | Canola | cytosol | 0.68 | 3.92 |
| CDX78942 | Canola | cytosol | 2.05 | 3.92 |
| CDX76475 | Canola | cytosol | 1.37 | 3.88 |
| CDX99360 | Canola | cytosol | 2.05 | 3.6 |
| KRH34004 | Soybean | cytosol | 1.71 | 3.14 |
| KRH34003 | Soybean | cytosol | 1.37 | 2.75 |
| CDY09330 | Canola | cytosol | 0.86 | 2.22 |
| CDX76473 | Canola | cytosol | 0.86 | 2.07 |
| CDY08035 | Canola | cytosol | 0.34 | 2.02 |
Protein Annotations
| EnsemblPlants:CDX70840 | EnsemblPlantsGene:GSBRNA2T00140733001 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | ProteinID:CDX70840 |
| ProteinID:CDX70840.1 | SEG:seg | UniParc:UPI0004EEC328 | MapMan:35.2 | : | : |
Description
BnaC03g09240D
Coordinates
chrLK031791:+:2331902..2333656
Molecular Weight (calculated)
66373.6 Da
IEP (calculated)
5.034
GRAVY (calculated)
-0.624
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETNRDGDG ELYPSGVEQV PGEKRKREGL VSGEREAEEV ILVGDTKAIK ILGFDGGELS QSQSQRSLFS KRQAFEVQNN INLKGSLVKE ESGEEPARAK
101: QDYSTFNDFD KLREERNFAV GQTWALYDDK VDGMPRLYAQ ITKLSVPGSC LSVTWLEPDP DDKEELQSYE KDLPVSVGWF KLGKTEDIKD HRRFSHLVHC
201: NEGSSSAGRR FSVYPREGET WAIFKGRYKR DNSWSYRDID WSADPGSHRK YNYQFVEIVP EEDAHTDAPP VGFLHKAKGF SNVFCRFAKE VVKSYIQCSH
301: TEQFSHRVPS FKTTGIEAEG VPRGAYELDP AALPENIKEI DVPLHLLEEP NSEEEDNKHS QCVYFASKGI TFQTGQIWSF GSGDDNLPRY YGKIQKITFV
401: QAFEQDPVVK LHIGRLKARP IKSVIQWIDK EMPIGCGNFR ARKVLEIFTD LDVFSRQISQ DSSGDGDDYC IMPKAGDVWA IYRNWSNGIE VADLQSQSYD
501: LVEVLDDKMD YKVLLLAPEG GFESVDSKGF GSVYVAATEH WMDGADVRFT VPKCELLRFS HRVHTLKVTK EMRGVSQQVY EPSF
101: QDYSTFNDFD KLREERNFAV GQTWALYDDK VDGMPRLYAQ ITKLSVPGSC LSVTWLEPDP DDKEELQSYE KDLPVSVGWF KLGKTEDIKD HRRFSHLVHC
201: NEGSSSAGRR FSVYPREGET WAIFKGRYKR DNSWSYRDID WSADPGSHRK YNYQFVEIVP EEDAHTDAPP VGFLHKAKGF SNVFCRFAKE VVKSYIQCSH
301: TEQFSHRVPS FKTTGIEAEG VPRGAYELDP AALPENIKEI DVPLHLLEEP NSEEEDNKHS QCVYFASKGI TFQTGQIWSF GSGDDNLPRY YGKIQKITFV
401: QAFEQDPVVK LHIGRLKARP IKSVIQWIDK EMPIGCGNFR ARKVLEIFTD LDVFSRQISQ DSSGDGDDYC IMPKAGDVWA IYRNWSNGIE VADLQSQSYD
501: LVEVLDDKMD YKVLLLAPEG GFESVDSKGF GSVYVAATEH WMDGADVRFT VPKCELLRFS HRVHTLKVTK EMRGVSQQVY EPSF
001: MSMNLSRFCQ ITLMKLVYML HTCIKQKDLL VCSFEWEEVM KVYFVFYLRV CIGSPIGFLP LTGIEGKGVP KDAYELDKAA LPETIEEFIV PLDSESNIKS
101: KRQDIYFASK GNVFLTGQIW SFYCGDDSLP LYYGRIQKIT FTQAFMQDPV CKLHIGRLKA TRFPADVIDW ENKGTPVGCG TFYARKALEI ITPSEVSLQI
201: TPQTSIDGIE YTILPKIGEV WVIYKYWSRD MDAEDFSFAS YNIVEILDDT LEYKVQLLKH DPFYKDHKKE NTLLRAVKKN ESWEMEGSGS YIPTYTIPKR
301: ERIRFSNKVP ASRVTIEMYG ELVDLISVDS RALPSHLIAS DH
101: KRQDIYFASK GNVFLTGQIW SFYCGDDSLP LYYGRIQKIT FTQAFMQDPV CKLHIGRLKA TRFPADVIDW ENKGTPVGCG TFYARKALEI ITPSEVSLQI
201: TPQTSIDGIE YTILPKIGEV WVIYKYWSRD MDAEDFSFAS YNIVEILDDT LEYKVQLLKH DPFYKDHKKE NTLLRAVKKN ESWEMEGSGS YIPTYTIPKR
301: ERIRFSNKVP ASRVTIEMYG ELVDLISVDS RALPSHLIAS DH
Arabidopsis Description
DNAJ heat shock amino-terminal domain protein, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:Q3E9E2]
SUBAcon: [extracellular,golgi]
SUBAcon: [extracellular,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.