Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057893 | Potato | cytosol | 74.12 | 69.83 |
| Bra039476.1-P | Field mustard | cytosol | 14.47 | 32.04 |
| CDX88917 | Canola | nucleus | 19.52 | 26.81 |
| Solyc01g057670.1.1 | Tomato | mitochondrion | 7.68 | 25.0 |
| CDX92586 | Canola | nucleus | 16.89 | 22.0 |
| AT5G18740.1 | Thale cress | nucleus | 20.39 | 21.63 |
| Solyc10g007630.1.1 | Tomato | cytosol | 22.15 | 20.78 |
| Solyc01g098330.1.1 | Tomato | nucleus | 18.64 | 20.73 |
| Bra006478.1-P | Field mustard | nucleus | 21.71 | 18.61 |
| CDX88918 | Canola | cytosol | 21.49 | 18.42 |
| AT3G05110.1 | Thale cress | nucleus | 14.91 | 18.28 |
| AT5G18730.1 | Thale cress | cytosol | 20.83 | 17.99 |
| CDX70843 | Canola | extracellular, golgi | 21.27 | 17.93 |
| Solyc07g039220.1.1 | Tomato | cytosol | 13.82 | 17.85 |
| KRG92798 | Soybean | cytosol | 27.41 | 17.63 |
| Solyc08g029220.1.1 | Tomato | nucleus | 30.48 | 17.62 |
| CDX70837 | Canola | mitochondrion | 19.3 | 17.46 |
| Bra024236.1-P | Field mustard | nucleus | 13.82 | 17.12 |
| Bra006479.1-P | Field mustard | cytosol | 20.61 | 17.03 |
| Os11t0574200-00 | Rice | cytosol | 12.06 | 16.82 |
| Bra009972.1-P | Field mustard | nucleus | 22.37 | 16.22 |
| CDX86172 | Canola | nucleus | 22.37 | 16.22 |
| GSMUA_Achr11P... | Banana | nucleus | 23.03 | 16.05 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 27.19 | 16.02 |
| Bra039477.1-P | Field mustard | plastid | 18.86 | 15.99 |
| Solyc01g098340.2.1 | Tomato | cytosol | 27.63 | 15.75 |
| CDY13918 | Canola | nucleus | 19.74 | 15.71 |
| Bra002183.1-P | Field mustard | nucleus | 19.52 | 15.67 |
| Bra039461.1-P | Field mustard | cytosol | 18.2 | 15.57 |
| CDY27796 | Canola | cytosol | 17.98 | 15.5 |
| CDY41935 | Canola | cytosol | 17.98 | 15.41 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 14.04 | 15.35 |
| CDX80667 | Canola | nucleus | 22.37 | 15.34 |
| CDX92856 | Canola | nucleus | 15.79 | 15.32 |
| Solyc01g098250.2.1 | Tomato | nucleus | 32.68 | 15.01 |
| CDY29872 | Canola | cytosol | 14.47 | 14.8 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 23.46 | 14.72 |
| CDX70840 | Canola | nucleus | 18.42 | 14.38 |
| Bra006476.1-P | Field mustard | nucleus | 18.42 | 14.29 |
| CDX88920 | Canola | nucleus | 18.42 | 14.29 |
| Bra006473.1-P | Field mustard | plastid | 21.71 | 14.08 |
| AT3G04960.3 | Thale cress | cytosol | 18.64 | 14.05 |
| Solyc01g057750.1.1 | Tomato | cytosol | 18.86 | 13.87 |
| CDX88924 | Canola | plastid | 21.49 | 13.86 |
| Solyc01g057650.1.1 | Tomato | cytosol | 5.04 | 13.45 |
| CDY27811 | Canola | nucleus | 13.82 | 13.15 |
| Solyc01g044270.2.1 | Tomato | cytosol | 22.37 | 13.11 |
| EES08665 | Sorghum | nucleus | 19.3 | 12.96 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 18.2 | 12.91 |
| Solyc03g019630.1.1 | Tomato | nucleus | 4.39 | 12.82 |
| Zm00001d040846_P001 | Maize | cytosol | 26.1 | 12.71 |
| KRG96896 | Soybean | cytosol | 28.95 | 12.48 |
| KRH68628 | Soybean | cytosol | 29.17 | 12.46 |
| CDX99992 | Canola | cytosol | 25.22 | 12.22 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 26.1 | 12.19 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 26.1 | 12.19 |
| Solyc01g067780.1.1 | Tomato | cytosol | 24.12 | 12.18 |
| EES00793 | Sorghum | cytosol | 26.1 | 12.18 |
| Solyc05g040050.1.1 | Tomato | nucleus | 20.83 | 12.13 |
| AT4G27980.2 | Thale cress | cytosol | 16.01 | 12.11 |
| Os01t0375100-01 | Rice | nucleus | 26.75 | 12.1 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 25.88 | 12.1 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 25.88 | 12.09 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 17.76 | 12.09 |
| CDY19714 | Canola | nucleus | 25.44 | 12.06 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 23.68 | 12.05 |
| KXG32106 | Sorghum | cytosol | 26.54 | 11.97 |
| EER88793 | Sorghum | cytosol | 24.78 | 11.92 |
| KXG28768 | Sorghum | nucleus | 25.44 | 11.9 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 30.48 | 11.89 |
| Zm00001d008412_P001 | Maize | cytosol | 26.54 | 11.87 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 26.54 | 11.82 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 26.75 | 11.8 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 26.32 | 11.73 |
| Os06t0535300-01 | Rice | nucleus | 26.1 | 11.69 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 21.71 | 11.59 |
| Zm00001d008413_P001 | Maize | cytosol | 25.66 | 11.49 |
| Os11t0578100-00 | Rice | cytosol | 26.54 | 11.49 |
| Solyc01g065570.2.1 | Tomato | cytosol | 5.92 | 11.34 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 19.96 | 11.3 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 21.49 | 11.28 |
| Zm00001d019461_P002 | Maize | cytosol | 27.41 | 11.2 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 23.25 | 11.17 |
| Solyc07g047690.1.1 | Tomato | nucleus | 19.3 | 11.17 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 25.22 | 11.12 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 25.0 | 11.03 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 27.19 | 10.96 |
| OQU83710 | Sorghum | cytosol | 23.25 | 10.88 |
| EER98396 | Sorghum | nucleus | 27.19 | 10.87 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 20.61 | 10.8 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 20.39 | 10.78 |
| Solyc03g007280.2.1 | Tomato | cytosol | 4.61 | 10.77 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 21.49 | 10.66 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 25.44 | 10.57 |
| Os11t0573800-00 | Rice | nucleus | 21.27 | 10.57 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 21.27 | 10.55 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 19.96 | 10.53 |
| CDY27809 | Canola | nucleus | 22.81 | 10.48 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 25.0 | 10.37 |
| Solyc03g019640.1.1 | Tomato | nucleus | 21.05 | 10.33 |
| Solyc08g005300.1.1 | Tomato | nucleus | 20.61 | 10.31 |
| Zm00001d052947_P001 | Maize | plastid | 19.3 | 10.17 |
| AT5G27240.1 | Thale cress | nucleus | 24.56 | 10.14 |
| EES09993 | Sorghum | nucleus | 23.9 | 9.88 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 25.44 | 9.73 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 25.44 | 9.73 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 25.44 | 9.68 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 24.78 | 9.5 |
| OQU83709 | Sorghum | cytosol | 23.9 | 9.38 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 5.48 | 9.16 |
| KRH34004 | Soybean | cytosol | 6.36 | 9.12 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 21.05 | 9.09 |
| CDY41919 | Canola | nucleus, plastid | 22.81 | 8.73 |
| AT3G04980.2 | Thale cress | nucleus | 22.37 | 8.62 |
| Bra002182.1-P | Field mustard | nucleus | 19.3 | 8.11 |
| KRH34003 | Soybean | cytosol | 5.04 | 7.9 |
| CDY41917 | Canola | nucleus | 15.35 | 7.32 |
| Bra006477.1-P | Field mustard | cytosol | 21.27 | 7.05 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 8.33 | 7.04 |
| CDX70841 | Canola | nucleus | 20.39 | 6.43 |
| Bra039474.1-P | Field mustard | nucleus | 21.49 | 6.42 |
| CDX88919 | Canola | cytosol | 21.49 | 6.2 |
Protein Annotations
| EnsemblPlants:Solyc01g098310.1.1 | EnsemblPlantsGene:Solyc01g098310.1 | InterPro:DUF3444 | PFAM:PF11926 | SEG:seg | UniParc:UPI00027685D7 |
| UniProt:K4B0L8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:88874507..88878839
Molecular Weight (calculated)
51370.9 Da
IEP (calculated)
4.994
GRAVY (calculated)
-0.342
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGTEREGVP SGSFELNPAS LPLSSDDIWY PVNVKEDHRT TNSEPVENVL SEFLLELVML LCLCHWGRKT KMLPDGSILY AGGITDQFVV ETSINYNDFV
101: KAVFDRLGID SSDKMLHFTV KFDRSEPIRL RDQQGVDTLL QFNDGFAHVY VSSLQEEPYS ITPSVGARKV ELDVVSYSGQ NTTPAGDDEN NLESALEKAR
201: FQSAGDSSKP LKEAIANQSA GDREPQQKEA VGVDDQKIIW AVYDDVHDAM PRKYVRISKV FGPEFKIMFR WLEPLPDEDQ RECAWVKSGC GKFISGDIHS
301: TSDRFSFSHQ MHCKEGTSDM YILYPRKGEI WALFKAQDIL WSPLSHSEPK YEVVEILSDF VKNAGVRIGY LDKVTGFAGI FQRTKLFVSS SFVIKPNELY
401: KFSHRILSFK MIRTEGTGVP VGSFELDTAS LPLDPNDIWY PGKVKEELGL AKLGIR
101: KAVFDRLGID SSDKMLHFTV KFDRSEPIRL RDQQGVDTLL QFNDGFAHVY VSSLQEEPYS ITPSVGARKV ELDVVSYSGQ NTTPAGDDEN NLESALEKAR
201: FQSAGDSSKP LKEAIANQSA GDREPQQKEA VGVDDQKIIW AVYDDVHDAM PRKYVRISKV FGPEFKIMFR WLEPLPDEDQ RECAWVKSGC GKFISGDIHS
301: TSDRFSFSHQ MHCKEGTSDM YILYPRKGEI WALFKAQDIL WSPLSHSEPK YEVVEILSDF VKNAGVRIGY LDKVTGFAGI FQRTKLFVSS SFVIKPNELY
401: KFSHRILSFK MIRTEGTGVP VGSFELDTAS LPLDPNDIWY PGKVKEELGL AKLGIR
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.