Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057888 | Potato | cytosol | 31.22 | 64.65 |
| PGSC0003DMT400057894 | Potato | cytosol | 38.29 | 40.46 |
| Solyc01g098340.2.1 | Tomato | cytosol | 58.05 | 29.75 |
| Bra039476.1-P | Field mustard | cytosol | 13.66 | 27.18 |
| CDX88917 | Canola | nucleus | 20.49 | 25.3 |
| Solyc08g029220.1.1 | Tomato | nucleus | 41.95 | 21.8 |
| Solyc01g057650.1.1 | Tomato | cytosol | 9.02 | 21.64 |
| Solyc01g057670.1.1 | Tomato | mitochondrion | 6.83 | 20.0 |
| Solyc01g098250.2.1 | Tomato | nucleus | 47.56 | 19.64 |
| AT5G18740.1 | Thale cress | nucleus | 20.24 | 19.3 |
| Solyc01g098310.1.1 | Tomato | cytosol | 20.73 | 18.64 |
| Bra024236.1-P | Field mustard | nucleus | 16.34 | 18.21 |
| Solyc10g007630.1.1 | Tomato | cytosol | 21.22 | 17.9 |
| AT3G05110.1 | Thale cress | nucleus | 14.63 | 16.13 |
| CDX92586 | Canola | nucleus | 13.41 | 15.71 |
| CDX70837 | Canola | mitochondrion | 19.27 | 15.67 |
| Bra006478.1-P | Field mustard | nucleus | 20.24 | 15.6 |
| CDX88918 | Canola | cytosol | 20.24 | 15.6 |
| CDX70843 | Canola | extracellular, golgi | 20.49 | 15.53 |
| AT5G18730.1 | Thale cress | cytosol | 19.51 | 15.15 |
| CDY29872 | Canola | cytosol | 16.34 | 15.02 |
| KRG92798 | Soybean | cytosol | 25.85 | 14.95 |
| Bra006479.1-P | Field mustard | cytosol | 20.0 | 14.86 |
| CDX92856 | Canola | nucleus | 16.59 | 14.47 |
| CDY13918 | Canola | nucleus | 20.0 | 14.31 |
| Bra002183.1-P | Field mustard | nucleus | 19.27 | 13.91 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 20.98 | 13.37 |
| CDY27811 | Canola | nucleus | 15.12 | 12.94 |
| GSMUA_Achr11P... | Banana | nucleus | 20.49 | 12.84 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 24.15 | 12.79 |
| Solyc07g039220.1.1 | Tomato | cytosol | 10.98 | 12.75 |
| Solyc01g057750.1.1 | Tomato | cytosol | 19.02 | 12.58 |
| Bra039477.1-P | Field mustard | plastid | 16.1 | 12.27 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 21.71 | 12.24 |
| AT3G04960.3 | Thale cress | cytosol | 18.05 | 12.23 |
| Bra039461.1-P | Field mustard | cytosol | 15.85 | 12.2 |
| CDY27796 | Canola | cytosol | 15.37 | 11.91 |
| CDX88924 | Canola | plastid | 20.49 | 11.88 |
| CDY41935 | Canola | cytosol | 15.37 | 11.84 |
| Bra006473.1-P | Field mustard | plastid | 20.24 | 11.81 |
| AT4G27980.2 | Thale cress | cytosol | 17.07 | 11.61 |
| Bra006476.1-P | Field mustard | nucleus | 16.34 | 11.39 |
| CDX88920 | Canola | nucleus | 16.34 | 11.39 |
| CDX70840 | Canola | nucleus | 16.1 | 11.3 |
| Solyc01g067780.1.1 | Tomato | cytosol | 24.39 | 11.07 |
| Bra009972.1-P | Field mustard | nucleus | 16.59 | 10.81 |
| CDX86172 | Canola | nucleus | 16.59 | 10.81 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 30.0 | 10.52 |
| Zm00001d040846_P001 | Maize | cytosol | 23.9 | 10.47 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 22.2 | 10.46 |
| Os11t0574200-00 | Rice | cytosol | 8.29 | 10.4 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 20.24 | 10.31 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 16.83 | 10.3 |
| CDX80667 | Canola | nucleus | 16.34 | 10.08 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 10.24 | 10.07 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 20.98 | 10.07 |
| EES08665 | Sorghum | nucleus | 16.59 | 10.01 |
| EES00793 | Sorghum | cytosol | 23.66 | 9.93 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 20.98 | 9.9 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 20.49 | 9.73 |
| Os01t0375100-01 | Rice | nucleus | 23.9 | 9.72 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 20.49 | 9.72 |
| KRH68628 | Soybean | cytosol | 25.12 | 9.65 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 21.46 | 9.58 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 21.46 | 9.58 |
| KRG96896 | Soybean | cytosol | 24.63 | 9.55 |
| Zm00001d052947_P001 | Maize | plastid | 19.51 | 9.25 |
| Os06t0535300-01 | Rice | nucleus | 22.93 | 9.23 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 21.95 | 9.23 |
| Solyc05g040050.1.1 | Tomato | nucleus | 17.56 | 9.2 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 21.71 | 9.12 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 21.71 | 9.12 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 21.46 | 9.02 |
| Solyc01g044270.2.1 | Tomato | cytosol | 17.07 | 9.0 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 22.44 | 8.99 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 11.71 | 8.89 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 22.2 | 8.89 |
| EER88793 | Sorghum | cytosol | 20.49 | 8.86 |
| Os11t0578100-00 | Rice | cytosol | 22.68 | 8.83 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 22.2 | 8.8 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 19.02 | 8.71 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 21.95 | 8.7 |
| Zm00001d008412_P001 | Maize | cytosol | 21.46 | 8.64 |
| KXG32106 | Sorghum | cytosol | 21.22 | 8.61 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 21.46 | 8.51 |
| CDX99992 | Canola | cytosol | 19.51 | 8.5 |
| Zm00001d019461_P002 | Maize | cytosol | 22.93 | 8.42 |
| CDY19714 | Canola | nucleus | 19.76 | 8.42 |
| Zm00001d008413_P001 | Maize | cytosol | 20.73 | 8.35 |
| EER98396 | Sorghum | nucleus | 23.17 | 8.33 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 19.02 | 8.22 |
| Os11t0573800-00 | Rice | nucleus | 18.29 | 8.17 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 22.44 | 8.13 |
| Solyc07g047690.1.1 | Tomato | nucleus | 15.61 | 8.12 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 21.71 | 8.11 |
| OQU83710 | Sorghum | cytosol | 19.27 | 8.11 |
| KXG28768 | Sorghum | nucleus | 19.27 | 8.1 |
| CDY27809 | Canola | nucleus | 19.51 | 8.06 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 21.46 | 8.01 |
| EES09993 | Sorghum | nucleus | 21.46 | 7.98 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 23.17 | 7.97 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 23.17 | 7.97 |
| AT5G27240.1 | Thale cress | nucleus | 20.98 | 7.79 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 22.44 | 7.73 |
| Solyc08g005300.1.1 | Tomato | nucleus | 17.07 | 7.68 |
| Solyc03g019640.1.1 | Tomato | nucleus | 17.32 | 7.64 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 22.2 | 7.6 |
| OQU83709 | Sorghum | cytosol | 20.98 | 7.4 |
| CDY41917 | Canola | nucleus | 16.59 | 7.11 |
| CDY41919 | Canola | nucleus, plastid | 19.02 | 6.55 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 16.83 | 6.53 |
| AT3G04980.2 | Thale cress | nucleus | 18.78 | 6.51 |
| Bra002182.1-P | Field mustard | nucleus | 16.83 | 6.36 |
| Bra006477.1-P | Field mustard | cytosol | 20.0 | 5.96 |
| CDX70841 | Canola | nucleus | 20.73 | 5.87 |
| Solyc01g065570.2.1 | Tomato | cytosol | 3.17 | 5.46 |
| CDX88919 | Canola | cytosol | 20.24 | 5.25 |
| Bra039474.1-P | Field mustard | nucleus | 18.29 | 4.91 |
| KRH34004 | Soybean | cytosol | 2.93 | 3.77 |
| KRH34003 | Soybean | cytosol | 1.95 | 2.75 |
| Solyc03g019630.1.1 | Tomato | nucleus | 0.98 | 2.56 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 1.46 | 2.2 |
| Solyc03g007280.2.1 | Tomato | cytosol | 0.98 | 2.05 |
Protein Annotations
| EnsemblPlants:Solyc01g098330.1.1 | EnsemblPlantsGene:Solyc01g098330.1 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | UniParc:UPI00027685D9 |
| UniProt:K4B0M0 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:88885453..88886739
Molecular Weight (calculated)
46308.4 Da
IEP (calculated)
7.250
GRAVY (calculated)
-0.644
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEDKTLHW GRKNKVMPDG SISYGGGITD QVIVKTGIKY NDFVNAVFDR LGIDPSGRIL HFTVKFDSSD LIRLRDQKSV DTLLQFNDGF AHVYVSSLEE
101: ELNSRPPSGH AEKVVVVGYS DSEKERFQSA GDSKLLKKAT ANQSEGARDG KPQQNEAVRG DDQNHAGVTR SCSKSMEIFD QNGVGLPEGS VQNNSSKIKT
201: VNEQAPLPTS GCEKKVKVGL IVNSDSGPST IPDGNPPKVY DYPDPEFRDL DKHKSEIYFA VDQIWTCHYA DFMPRFYACI RKVSSPEFKI KLRWLEAHPE
301: DERERAWVRA DLPVGCGKFR RGSSKYNSDR LVFSHQMQCE NDKRGLYIVF PRKGETWALF KDWDFRWSSD PKSYRKYKYE IVQVLSDFVG DAGIQVGDLE
401: KVTGFISIFQ
101: ELNSRPPSGH AEKVVVVGYS DSEKERFQSA GDSKLLKKAT ANQSEGARDG KPQQNEAVRG DDQNHAGVTR SCSKSMEIFD QNGVGLPEGS VQNNSSKIKT
201: VNEQAPLPTS GCEKKVKVGL IVNSDSGPST IPDGNPPKVY DYPDPEFRDL DKHKSEIYFA VDQIWTCHYA DFMPRFYACI RKVSSPEFKI KLRWLEAHPE
301: DERERAWVRA DLPVGCGKFR RGSSKYNSDR LVFSHQMQCE NDKRGLYIVF PRKGETWALF KDWDFRWSSD PKSYRKYKYE IVQVLSDFVG DAGIQVGDLE
401: KVTGFISIFQ
001: MMDDTVNELL RRKKAVLNHQ IKSDLVASTL ANHQEKPQAF SLLQQKDVQT KSPGTHFSNC AVKVGEKRKR NECGGICNTE NRSMTEDVVN LSKDRNVDSK
101: RSAFSDNGDA TQEFGSGKQL PEVDCSKDPM SNAQVGAVVG NSRNLEVDQN SGLCDSESGG VVPQKISGFA GLKFNDFDKL REEVNFEVGQ TWAIFDPVDG
201: MPRLYAKIIK VSAPCFGLRI TYLEPDPDGE KELQWFEEDL PVSVGNFRLG ENKCTQDRSI FSHVIHCNEL SNTLCFSVTC RFINTCHFSV SPREGETWAL
301: FKNWDIKWSS EPDSHRKYEY EFVEILSDYA DEAGVYVAYL HKAKGFASVF LRMGTGYEGI FRILPRSLYR FSHRVPSFKL TGVKGKDMPK DAYELDQAAL
401: PETIEEIIVP SNSESNIKSK RQAIYIASKG
101: RSAFSDNGDA TQEFGSGKQL PEVDCSKDPM SNAQVGAVVG NSRNLEVDQN SGLCDSESGG VVPQKISGFA GLKFNDFDKL REEVNFEVGQ TWAIFDPVDG
201: MPRLYAKIIK VSAPCFGLRI TYLEPDPDGE KELQWFEEDL PVSVGNFRLG ENKCTQDRSI FSHVIHCNEL SNTLCFSVTC RFINTCHFSV SPREGETWAL
301: FKNWDIKWSS EPDSHRKYEY EFVEILSDYA DEAGVYVAYL HKAKGFASVF LRMGTGYEGI FRILPRSLYR FSHRVPSFKL TGVKGKDMPK DAYELDQAAL
401: PETIEEIIVP SNSESNIKSK RQAIYIASKG
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G18740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.