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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • extracellular 1
  • golgi 1
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74107 Canola cytosol 14.87 37.69
PGSC0003DMT400057888 Potato cytosol 9.28 31.82
PGSC0003DMT400089411 Potato cytosol 9.57 29.02
CDY24701 Canola nucleus 24.59 28.35
CDX74108 Canola cytosol 8.25 27.72
Bra001194.1-P Field mustard cytosol 8.25 27.72
Bra039476.1-P Field mustard cytosol 8.39 27.67
KRH34004 Soybean cytosol 12.81 27.36
CDY08056 Canola nucleus 25.04 27.07
Bra020757.1-P Field mustard nucleus 25.04 26.03
OQU79981 Sorghum cytosol 12.08 25.87
CDY05255 Canola nucleus 25.18 25.83
CDX88917 Canola nucleus 12.37 25.3
CDY13919 Canola nucleus 17.38 25.0
KRG92798 Soybean cytosol 25.63 24.54
EES07899 Sorghum cytosol 25.77 23.81
OQU85000 Sorghum cytosol 25.48 23.76
EES10633 Sorghum cytosol 25.48 23.54
KRH34003 Soybean cytosol 10.01 23.37
AT4G19590.2 Thale cress nucleus 12.67 22.99
Bra009972.1-P Field mustard nucleus 21.06 22.73
CDX86172 Canola nucleus 21.06 22.73
EES10933 Sorghum cytosol 24.15 22.65
PGSC0003DMT400038431 Potato nucleus 26.07 22.49
Solyc08g029220.1.1 Tomato nucleus 25.92 22.31
EES00793 Sorghum cytosol 31.81 22.11
Solyc10g007630.1.1 Tomato cytosol 15.76 22.02
CDX80667 Canola nucleus 21.35 21.8
PGSC0003DMT400054841 Potato cytosol 15.76 21.66
KXG28768 Sorghum nucleus 31.08 21.64
EER88793 Sorghum cytosol 29.75 21.31
PGSC0003DMT400058792 Potato nucleus 27.84 20.61
VIT_05s0020g02050.t01 Wine grape nucleus 25.18 20.48
EES09993 Sorghum nucleus 32.99 20.31
AT5G37760.1 Thale cress cytosol 6.19 20.29
Solyc01g067780.1.1 Tomato cytosol 26.66 20.04
KRH11282 Soybean nucleus 28.57 20.04
CDX92582 Canola nucleus 24.74 19.95
KRH50936 Soybean nucleus 28.13 19.94
PGSC0003DMT400086601 Potato cytosol 5.89 19.9
OQU83710 Sorghum cytosol 28.42 19.82
KRH21004 Soybean nucleus 27.98 19.63
KXG32106 Sorghum cytosol 29.01 19.49
Solyc01g098310.1.1 Tomato cytosol 12.96 19.3
EES11310 Sorghum cytosol, plastid 13.84 19.11
KXG34016 Sorghum nucleus 22.98 18.82
PGSC0003DMT400057894 Potato cytosol 10.6 18.56
CDY41935 Canola cytosol 14.43 18.42
OQU83709 Sorghum cytosol 31.37 18.33
PGSC0003DMT400057893 Potato cytosol 12.96 18.18
KXG19130 Sorghum cytosol 13.55 18.18
Solyc01g098250.2.1 Tomato nucleus 26.51 18.13
KRH02180 Soybean cytosol, nucleus, plastid 27.69 18.01
CDY27796 Canola cytosol 13.99 17.96
CDX92586 Canola nucleus 9.13 17.71
KRG96896 Soybean cytosol 27.54 17.67
CDX99992 Canola cytosol 24.3 17.53
KRH68628 Soybean cytosol 27.54 17.53
Bra039461.1-P Field mustard cytosol 13.7 17.45
CDY19714 Canola nucleus 24.15 17.05
PGSC0003DMT400057904 Potato nucleus 26.95 16.93
EER98396 Sorghum nucleus 28.42 16.91
VIT_14s0030g00640.t01 Wine grape nucleus 29.01 16.85
Bra024236.1-P Field mustard nucleus 9.13 16.85
KXG37199 Sorghum cytosol 6.77 16.79
Solyc01g098330.1.1 Tomato nucleus 10.01 16.59
Bra006479.1-P Field mustard cytosol 13.25 16.3
CDX88918 Canola cytosol 12.67 16.17
CDX70843 Canola extracellular, golgi 12.81 16.08
Bra002183.1-P Field mustard nucleus 13.4 16.02
Bra006478.1-P Field mustard nucleus 12.52 15.98
CDX92856 Canola nucleus 10.9 15.74
CDY27809 Canola nucleus 22.53 15.42
CDY13918 Canola nucleus 12.96 15.36
Bra039477.1-P Field mustard plastid 12.08 15.24
CDY29872 Canola cytosol 9.87 15.02
CDX70837 Canola mitochondrion 10.9 14.68
CDX88924 Canola plastid 15.02 14.43
KXG34037 Sorghum cytosol 16.2 14.36
Bra006473.1-P Field mustard plastid 14.73 14.22
Bra006476.1-P Field mustard nucleus 11.93 13.78
CDX88920 Canola nucleus 11.93 13.78
CDX70840 Canola nucleus 11.78 13.7
OQU83714 Sorghum cytosol, nucleus, plastid 21.21 13.64
CDY27811 Canola nucleus 9.13 12.94
CDY41919 Canola nucleus, plastid 22.53 12.85
Solyc01g098340.2.1 Tomato cytosol 13.7 11.62
PGSC0003DMT400057887 Potato cytosol 13.7 11.05
CDX70844 Canola mitochondrion, plasma membrane 13.4 10.66
PGSC0003DMT400094016 Potato nucleus 4.57 10.58
CDY13917 Canola endoplasmic reticulum, extracellular, mitochondrion 6.33 10.31
PGSC0003DMT400058788 Potato nucleus 7.36 10.22
CDY41917 Canola nucleus 12.52 8.89
Bra006477.1-P Field mustard cytosol 15.91 7.85
CDX70841 Canola nucleus 16.2 7.6
KXG32108 Sorghum cytosol 6.48 7.3
Bra002182.1-P Field mustard nucleus 11.49 7.19
Solyc01g067770.1.1 Tomato extracellular, vacuole 2.65 6.59
CDX88919 Canola cytosol 15.32 6.58
Bra039474.1-P Field mustard nucleus 14.58 6.49
Protein Annotations
EnsemblPlants:EES08665EnsemblPlantsGene:SORBI_3005G151400Gene3D:1.10.287.110InterPro:DUF3444InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfPANTHER:PTHR45089PFAM:PF00226PFAM:PF11926PFscan:PS50076
PRINTS:PR00625ProteinID:EES08665ProteinID:EES08665.1RefSeq:XP_002449677.1SMART:SM00271SUPFAM:SSF46565
UniParc:UPI0001A8655BUniProt:C5Y4C6MapMan:35.2:::
Description
hypothetical protein
Coordinates
chr5:+:62095980..62101945
Molecular Weight (calculated)
77002.3 Da
IEP (calculated)
7.007
GRAVY (calculated)
-0.804
Length
679 amino acids
Sequence
(BLAST)
001: MENISDHNRE EAFKAKEITA LESMEKKDFR HAQQIILGAQ ALCPELAENM SQMLIICDIH CAAESFVGGE IDFYGILQVE ETADETIITK QYRRIALSTH
101: PDKNSFAGAQ DAFKLVAEAY SVLSDPVKPT EHDMKRMYRS QNVPKETNKN KPSKKTDADK GSESGSSETF WTNCPHCKYR FQYIKEVLNR RVVCQTCKKK
201: FTASRIEDQE PPTPEHDWKR KNGTQNVTKE TNKRKPEEPM PTSSSMISDS QVPETMFQEQ QHETPSQQGH AVNSSRAYKE GNESAGGVNQ SNKPETVQGN
301: TRIPEIDKNI VGRSMADTFH SNVVDKLNKL GREQASTMPG SGSCSRGSSN QRKQHVDGKL SQNSSDGKKR ERENDYSCNI SMNSNQILGG DITSADRQSS
401: ENPVSSNINI HEITEGMCTS DDEDNIMTEA IDFVIEDECY SEPVMKIRDI NSITYNDGSA DQIWALYDNI DHMPRSYAKK KCDGHSKCLY WLKFYPLSEE
501: EKEWNNKTLP VACGKFCLGE KVDILEYSSL YSHTVEWKKI CVKKLSGGRG SAKTKMTMVY EIFPKRAEVW ALYKGWSKQW SSTDAYKNRS YEYEVVEILS
601: DMSDNGGANV IPLIRIKGFP SLLVAAKDKS TFHIPSGEVF RFSHRIPHYR VFGHENILKK NQWPCIGEKS YCSRRISAT
Best Arabidopsis Sequence Match ( AT3G06340.1 )
(BLAST)
001: MSINRDEALR AKDLAEGLMK KTDFTAARKL AMKAQKMDSS LENISRMIMV CDVHCAATEK LFGTEMDWYG ILQVEQIAND VIIKKQYKRL ALLLHPDKNK
101: LPGAESAFKL IGEAQRILLD REKRTLHDNK RKTWRKPAAP PYKAQQMPNY HTQPHFRASV NTRNIFTELR PEIRHPFQKA QAQPAAFTHL KTFGTSCVFC
201: RVRYEYDRAH VNKEVTCETC KKRFTAFEEP LQSAPQAKGP SQTTYCFPQQ SKFPDQRACS EPHKRPENPP TVSSSKASFP MPGSTAKHNG KRKRKNVAEC
301: SESSDSESSS ESEDDVNNDT TAAQDSGSNG GEQPRRSVRS KQKVSYNENL SDDDVDLVND NGEGSGKNID TEREKETEEE KQTNENHSST ESIDMNGKIE
401: VDQVETPSGA SDSEEDLSSG SAEKPNLINY DDPDFNDFDK LREKSCFQAG QIWAVYDEEE GMPRFYALIK KVTTPDFMLR YVWFEVDQDQ ENETPNLPVS
501: VGKFVVGNIE ETNLCSIFSH FVYSTTKIRT RKFTVFPKKG EIWALFKNWD INCSADSVSP MKYEYEFVEI LSDHAEGATV SVGFLSKVQG FNCVFCPMPK
601: DESNTCEIPP HEFCRFSHSI PSFRLTGTEG RGITKGWYEL DPAALPASVS QNLSGEEAAQ DRDRQSPPSG SAS
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SQT7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.