CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES08974
KXG28995
KXG29128
OQU88892

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	EES08974	AT4G36690.1	21798944
AT2G05230.1	KXG28995	AT4G36690.1	21798944
AT2G05230.1	KXG29128	AT4G36690.1	21798944
AT2G05230.1	OQU88892	AT5G60340.1	21798944
AT2G05250.1	EES08974	AT4G36690.1	21798944
AT2G05250.1	KXG28995	AT4G36690.1	21798944
AT2G05250.1	KXG29128	AT4G36690.1	21798944
AT2G05250.1	OQU88892	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003948_P001	Maize	cytosol	94.29	94.16
Zm00001d025238_P001	Maize	cytosol	93.33	93.46
Os04t0388800-01	Rice	nucleus	70.34	86.45
TraesCS2A01G284200.2	Wheat	cytosol	84.22	84.45
TraesCS2D01G283100.2	Wheat	cytosol	84.22	84.45
HORVU2Hr1G070040.6	Barley	cytosol	84.49	84.26
TraesCS2B01G301100.1	Wheat	cytosol	80.54	83.85
OQU85000	Sorghum	cytosol	71.29	71.98
VIT_17s0000g01140.t01	Wine grape	cytosol	20.54	59.92
GSMUA_Achr2P21160_001	Banana	cytosol	38.91	53.16
GSMUA_Achr3P02570_001	Banana	nucleus	37.01	52.01
VIT_01s0010g03770.t01	Wine grape	cytosol	17.01	51.65
GSMUA_Achr6P12230_001	Banana	nucleus	40.41	51.21
Bra020958.1-P	Field mustard	cytosol	6.94	50.0
CDX76476	Canola	cytosol	6.94	50.0
KRG89459	Soybean	cytosol	7.35	49.54
Bra031906.1-P	Field mustard	cytosol	6.12	48.91
CDY31307	Canola	cytosol	6.12	48.91
PGSC0003DMT400039473	Potato	nucleus	9.52	47.3
KRH53452	Soybean	cytosol	43.54	46.24
Solyc03g019630.1.1	Tomato	nucleus	9.66	45.51
KRH64496	Soybean	nucleus	42.72	45.38
CDX99361	Canola	cytosol	8.57	43.15
CDY60891	Canola	cytosol, mitochondrion, nucleus	10.2	43.1
VIT_01s0010g03760.t01	Wine grape	cytosol	46.67	41.98
Bra020957.1-P	Field mustard	cytosol	11.7	41.75
CDX76475	Canola	cytosol	11.7	41.75
VIT_16s0050g02590.t01	Wine grape	cytosol	41.5	41.05
PGSC0003DMT400023514	Potato	cytosol	40.95	40.95
Bra034258.1-P	Field mustard	cytosol	34.42	40.87
KRH18160	Soybean	nucleus	42.18	40.21
CDY35353	Canola	cytosol	33.88	39.97
CDX76994	Canola	nucleus	31.56	39.86
KRH16532	Soybean	cytosol	40.95	39.09
Solyc03g007280.2.1	Tomato	cytosol	10.34	38.97
PGSC0003DMT400059130	Potato	cytosol	41.22	38.95
KRH09248	Soybean	nucleus	41.09	38.77
CDY49460	Canola	nucleus	34.29	38.65
VIT_12s0057g00710.t01	Wine grape	cytosol	36.33	38.47
Solyc01g044270.2.1	Tomato	cytosol	40.68	38.43
CDY19683	Canola	cytosol	36.19	38.38
KRH14137	Soybean	nucleus	36.73	38.19
KRH73997	Soybean	nucleus	36.6	38.16
AT2G25560.1	Thale cress	cytosol	34.01	38.11
EES07899	Sorghum	cytosol	38.1	38.1
KRH38748	Soybean	nucleus	41.77	37.81
Bra003079.1-P	Field mustard	cytosol	36.33	37.66
EES10933	Sorghum	cytosol	36.73	37.29
Bra007790.1-P	Field mustard	nucleus	28.44	35.3
CDY11521	Canola	nucleus	28.44	35.3
CDY60893	Canola	cytosol	7.62	35.22
CDY60894	Canola	cytosol	7.62	35.22
CDX76474	Canola	cytosol	11.43	35.0
CDY27107	Canola	nucleus	17.41	34.97
CDX99362	Canola	nucleus	13.47	34.74
PGSC0003DMT400039476	Potato	nucleus	37.96	34.66
PGSC0003DMT400085016	Potato	cytosol	6.12	34.62
CDX76752	Canola	nucleus	29.12	34.57
Bra035378.1-P	Field mustard	cytosol	32.24	34.45
VIT_17s0000g01150.t01	Wine grape	nucleus	41.5	34.42
PGSC0003DMT400015678	Potato	nucleus	36.87	34.39
KRH54176	Soybean	nucleus	37.01	34.3
CDY09330	Canola	cytosol	10.48	34.22
CDY12382	Canola	nucleus	17.01	34.15
CDX74632	Canola	cytosol	27.21	34.07
Solyc07g047690.1.1	Tomato	nucleus	36.46	34.01
Bra013179.1-P	Field mustard	nucleus	31.97	33.91
CDX93081	Canola	nucleus	31.97	33.91
AT5G53150.3	Thale cress	cytosol	34.83	33.91
CDY15046	Canola	nucleus	31.7	33.77
CDY47298	Canola	cytosol	26.8	33.73
Bra038959.1-P	Field mustard	nucleus	17.55	33.51
CDX76473	Canola	cytosol	11.02	33.47
CDY60890	Canola	cytosol	11.02	33.47
KRH63773	Soybean	nucleus	37.01	33.46
AT2G05230.1	Thale cress	cytosol	32.11	33.43
AT2G05250.1	Thale cress	cytosol	32.11	33.43
PGSC0003DMT400048481	Potato	cytosol	35.51	33.33
Solyc05g040050.1.1	Tomato	nucleus	35.37	33.21
OQU79981	Sorghum	cytosol	14.29	33.12
AT5G35753.1	Thale cress	cytosol	19.05	32.63
AT5G50115.1	Thale cress	cytosol	21.36	32.37
AT5G37380.6	Thale cress	nucleus	18.23	31.09
CDX78942	Canola	cytosol	12.93	31.05
CDY60010	Canola	cytosol, mitochondrion, nucleus	9.25	30.91
KXG34016	Sorghum	nucleus	34.42	30.52
Solyc03g019640.1.1	Tomato	nucleus	37.82	29.92
PGSC0003DMT400092645	Potato	cytosol	5.17	29.46
Bra020955.1-P	Field mustard	cytosol	11.29	29.43
CDX99360	Canola	cytosol	13.2	29.13
CDY12569	Canola	cytosol	14.01	28.77
Bra040300.1-P	Field mustard	cytosol	14.29	28.46
Bra020956.1-P	Field mustard	nucleus	13.33	28.08
PGSC0003DMT400086295	Potato	mitochondrion	8.03	27.06
EES11310	Sorghum	cytosol, plastid	18.1	27.03
AT4G19580.1	Thale cress	cytosol	11.02	25.96
EES08665	Sorghum	nucleus	23.54	25.48
KXG19130	Sorghum	cytosol	17.28	25.1
AT5G62780.1	Thale cress	cytosol	6.8	24.15
Bra013403.1-P	Field mustard	nucleus	16.33	22.14
CDX78941	Canola	nucleus	16.33	21.74
AT4G19570.1	Thale cress	nucleus	16.19	21.33
Bra013404.1-P	Field mustard	nucleus	12.79	21.08
PGSC0003DMT400092668	Potato	cytosol	4.22	20.95
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	8.03	20.7
Solyc01g057650.1.1	Tomato	cytosol	4.76	20.47
EES00793	Sorghum	cytosol	25.03	18.83
KXG37199	Sorghum	cytosol	6.8	18.25
KXG32106	Sorghum	cytosol	24.9	18.1
EER88793	Sorghum	cytosol	22.99	17.83
PGSC0003DMT400080343	Potato	cytosol	14.42	17.18
Solyc01g057750.1.1	Tomato	cytosol	14.42	17.1
Solyc07g039220.1.1	Tomato	cytosol	8.16	17.0
KXG28768	Sorghum	nucleus	22.45	16.92
EER98396	Sorghum	nucleus	25.99	16.74
PGSC0003DMT400096427	Potato	cytosol	13.74	16.42
OQU83710	Sorghum	cytosol	21.5	16.22
EES09993	Sorghum	nucleus	24.08	16.05
OQU83709	Sorghum	cytosol	23.67	14.97
KXG34037	Sorghum	cytosol	15.37	14.75
OQU83714	Sorghum	cytosol, nucleus, plastid	14.97	10.42
KXG32108	Sorghum	cytosol	5.31	6.47
Bra002184.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EntrezGene:8070968	UniProt:C5YET3	InterPro:DUF3444	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	EnsemblPlants:EES10633	ProteinID:EES10633	ProteinID:EES10633.1	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR44137	PANTHER:PTHR44137:SF3	SMART:SM00271	EnsemblPlantsGene:SORBI_3006G052300	SUPFAM:SSF46565	unigene:Sbi.9718
UniParc:UPI0001A86A0E	RefSeq:XP_002446305.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:38401833..38404844

Molecular Weight (calculated)

82865.1 Da

IEP (calculated)

8.666

GRAVY (calculated)

-0.681

Length

735 amino acids

Sequence
(BLAST)

001: MGEEYNMDEA LKAKNVAETK FHARDIRGAR KYALKAQNLC PTLEGILQMV STLEVHLAAE SKIDGESDWY RILSLGAFAD EEEVKKQYRK LALLLHPDKN
101: KSVGAEEAFK LISEAWSVLS DTSRKVVYDE KRRNHSAVNV TNGIYTYDKK ANKRARKNAA AAAAAAAAAA AAAAAAEATT RPVGVDTFWT SCNRCRMQYE
201: YLRIYLNHNL LCPNCHHAFL AVETGFPCNG SSSSFSWSTK QHPQQNHNST KHSYVSTSRT SSIPGTGNGG YQQDNTYDSY NNQGFQWNQY SKTTPAAGTN
301: AYSTQALEKQ RRKHDESYSY NYSESGNTYV HEKTASRRGR FSKRRRHNYD AYTTVDYGGD NKETVAASTE PTAVFTDVGR VNGTSVERFR SAVSGRRANI
401: LGEITQIDTR SLLLEKAKAT VCEKLQELNI TSFAERKCSE GKLYPCDNNI KVNGVPSDKP GKGVKLCNSR SMEIQVPATD DKNPEQRRVP VSIDVPDPDF
501: HDFDKDRTEK TFDSDQVWAT YDSEDGMPRL YVMVQKVLSV RPFRIRMSFL NSKSNIELAP INWVASGFQK TCGDFRVGRY QVSETVNIFS HKVNWTKGPR
601: GIIRIVPQKG DTWALYRNWS PDWNELTPDD VIYKYEIVEV IDDFTEEQGL TVIPLLKVAG FKAVFHRHMD PKEVRRIPKE ELFRFSHRVP SRLLTGEEGN
701: NAPKGCHELD PAATPVDLLK VITELKEDTM TQTAK

Best Arabidopsis Sequence Match ( AT5G53150.3 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.