Factsheet for VIT_16s0050g02590.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g03770.t01	Wine grape	cytosol	20.32	62.4
VIT_17s0000g01140.t01	Wine grape	cytosol	21.13	62.3
Solyc03g007280.2.1	Tomato	cytosol	16.02	61.03
KRH53452	Soybean	cytosol	55.05	59.1
KRH64496	Soybean	nucleus	54.51	58.53
GSMUA_Achr8P00660_001	Banana	cytosol	43.07	53.16
PGSC0003DMT400023514	Potato	cytosol	52.22	52.79
KRH16532	Soybean	cytosol	53.57	51.69
VIT_01s0010g03760.t01	Wine grape	cytosol	56.8	51.65
KRH18160	Soybean	nucleus	52.89	50.97
GSMUA_Achr11P...	Banana	cytosol	30.82	45.62
CDY19683	Canola	cytosol	42.26	45.31
CDY49460	Canola	nucleus	39.3	44.79
Bra003079.1-P	Field mustard	cytosol	42.66	44.71
GSMUA_Achr2P21160_001	Banana	cytosol	31.76	43.87
GSMUA_Achr10P...	Banana	cytosol	35.4	42.9
AT5G53150.3	Thale cress	cytosol	43.47	42.78
VIT_17s0000g01150.t01	Wine grape	nucleus	51.01	42.78
GSMUA_Achr6P12230_001	Banana	nucleus	33.38	42.76
VIT_12s0057g00710.t01	Wine grape	cytosol	39.43	42.22
GSMUA_Achr3P02570_001	Banana	nucleus	29.34	41.68
EES10633	Sorghum	cytosol	41.05	41.5
OQU85000	Sorghum	cytosol	40.65	41.48
TraesCS2D01G283100.2	Wheat	cytosol	40.92	41.47
Zm00001d025238_P001	Maize	cytosol	40.92	41.42
Zm00001d003948_P001	Maize	cytosol	40.92	41.3
Os02t0510000-01	Rice	cytosol	40.78	41.28
TraesCS2A01G284200.2	Wheat	cytosol	40.65	41.2
Os03t0401200-01	Rice	cytosol	41.18	40.91
TraesCS3B01G607500.1	Wheat	cytosol	40.78	40.84
TraesCS2B01G301100.1	Wheat	cytosol	38.76	40.79
TraesCS3A01G536400.1	Wheat	cytosol	40.51	40.57
TraesCS3D01G541800.1	Wheat	cytosol	40.65	40.48
Zm00001d050565_P001	Maize	cytosol	34.86	40.22
EES07899	Sorghum	cytosol	38.49	38.91
Zm00001d025584_P001	Maize	cytosol	38.22	38.74
Zm00001d025585_P001	Maize	cytosol	38.09	38.61
TraesCS5A01G493100.1	Wheat	cytosol	39.43	38.5
TraesCS4D01G315600.1	Wheat	cytosol	39.17	38.24
Os04t0388800-01	Rice	nucleus	30.69	38.13
EES10933	Sorghum	cytosol	36.61	37.57
TraesCS4B01G319100.1	Wheat	cytosol	33.92	35.39
TraesCS3B01G470100.1	Wheat	nucleus	34.19	34.99
Os01t0923800-01	Rice	nucleus	34.99	34.95
TraesCS3A01G435100.1	Wheat	nucleus	34.72	32.62
VIT_02s0012g02290.t01	Wine grape	nucleus	24.63	30.96
KXG34016	Sorghum	nucleus	34.32	30.76
Zm00001d011997_P001	Maize	nucleus	33.92	30.66
VIT_05s0020g02050.t01	Wine grape	nucleus	25.98	23.11
VIT_05s0077g01780.t01	Wine grape	nucleus	5.38	18.35
VIT_14s0030g00640.t01	Wine grape	nucleus	26.92	17.11
VIT_14s0068g01140.t01	Wine grape	cytosol	15.48	15.29

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	ProteinID:CCB47761	ProteinID:CCB47761.1	InterPro:DUF3444	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	UniProt:F6H6F9	EMBL:FN595243	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44137
PANTHER:PTHR44137:SF5	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002109D9A	ArrayExpress:VIT_16s0050g02590	EnsemblPlantsGene:VIT_16s0050g02590
EnsemblPlants:VIT_16s0050g02590.t01	unigene:Vvi.22961	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:+:19570187..19573227

Molecular Weight (calculated)

82585.9 Da

IEP (calculated)

9.340

GRAVY (calculated)

-0.775

Length

743 amino acids

Sequence
(BLAST)

001: MECNKDEASR AKDIAVRKFR EKDFLGAKKF VLKAQNLYPG LEGLSQMLTI LDVYISAEKK VSGEVDWYGI LGVSPLADEE TVKKQYRKLA LILHPDKNKS
101: IGADGAFKLV SEAWSLLSDK GKRLSYNQKR DVKGSQQKVP SQNGVPSAPA SANGVHNFTS GVASNARTHS NANRPSPTSV PSPSHRRTDT FWTVCNRCKT
201: QYEYLRIYLN HTLLCPNCHE AFLALEKAPP SNVPKSSKWS SRQHPQSSNH FKKKRGREEV QASGWERGHS KNMSGSSSGH PSSNSTSVLK GEKTLKKRRI
301: DDDGTNGYGG NIVNQTATGN GGTGAVGTAG LRKGSFETER VYGVPGTNNK PNSYKEMSLF EIRNMLMEKA RKEIRNKLSE WSSTAAAKAG NKEKEKVKLK
401: EKQKGAVNGD GPDPNKNSKK RDQAKKFSPG TSAADTDSEA PAPMAINVPD SDFHDFDLDR TESSFGDNQV WSAYDDDDGM PRFYALIHKV ISLKPFKMKI
501: SWLNSKSNSE FGSVDWIGSG FTKTCGDFRI GRHEIYDSLN SFSHRLVEWT KGTRGAIRIL PKKGDVWALY RNWSPDWNEN TPDEVIHKYD MVEVLDDYNE
601: DYGVSVTPLI KVAGFRTIFH RHEDPKEVRT VLREEMFCFS HQVPNRLLTG QEAQNAPKGC RELDPAATPL ELLQIITEAT EAPVVNVGKD EEGRLQSAQQ
701: IKLDKMVDYA AKSNDGEIVE NSEQIKSEEI MGHAKVAREA GGG

Best Arabidopsis Sequence Match ( AT5G53150.3 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.