Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os07t0412400-01 | |
| Os11t0636900-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G05230.1 | Os11t0636900-02 | AT4G36690.1 | 21798944 |
| AT2G05230.1 | Os07t0412400-01 | AT5G60340.1 | 21798944 |
| AT2G05250.1 | Os11t0636900-02 | AT4G36690.1 | 21798944 |
| AT2G05250.1 | Os07t0412400-01 | AT5G60340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07899 | Sorghum | cytosol | 71.52 | 72.79 |
| Zm00001d025584_P001 | Maize | cytosol | 71.12 | 72.58 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 73.8 | 72.54 |
| Zm00001d025585_P001 | Maize | cytosol | 70.99 | 72.44 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 73.26 | 71.82 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 72.99 | 71.75 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 69.25 | 69.81 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 69.12 | 69.3 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 68.72 | 69.27 |
| EES10933 | Sorghum | cytosol | 65.64 | 67.82 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 68.18 | 66.93 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 63.64 | 66.85 |
| Bra020958.1-P | Field mustard | cytosol | 7.49 | 54.9 |
| CDX76476 | Canola | cytosol | 7.49 | 54.9 |
| PGSC0003DMT400039473 | Potato | nucleus | 10.7 | 54.05 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 17.25 | 53.31 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 17.65 | 52.38 |
| Solyc03g019630.1.1 | Tomato | nucleus | 10.29 | 49.36 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 11.23 | 48.28 |
| Bra020957.1-P | Field mustard | cytosol | 13.1 | 47.57 |
| Solyc03g007280.2.1 | Tomato | cytosol | 12.3 | 47.18 |
| KRH64496 | Soybean | nucleus | 43.32 | 46.82 |
| Bra031906.1-P | Field mustard | cytosol | 5.75 | 46.74 |
| CDY31307 | Canola | cytosol | 5.75 | 46.74 |
| CDX99361 | Canola | cytosol | 9.09 | 46.58 |
| KRH53452 | Soybean | cytosol | 43.05 | 46.53 |
| CDX76475 | Canola | cytosol | 12.7 | 46.12 |
| KRG89459 | Soybean | cytosol | 6.42 | 44.04 |
| PGSC0003DMT400023514 | Potato | cytosol | 42.38 | 43.13 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 46.79 | 42.84 |
| CDY49460 | Canola | nucleus | 37.17 | 42.64 |
| CDY19683 | Canola | cytosol | 39.17 | 42.28 |
| Bra003079.1-P | Field mustard | cytosol | 39.97 | 42.17 |
| CDY27107 | Canola | nucleus | 20.59 | 42.08 |
| KRH09248 | Soybean | nucleus | 43.05 | 41.34 |
| Bra038959.1-P | Field mustard | nucleus | 21.26 | 41.3 |
| CDY12382 | Canola | nucleus | 20.19 | 41.26 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 40.91 | 41.18 |
| Os02t0510000-01 | Rice | cytosol | 39.71 | 40.46 |
| KRH16532 | Soybean | cytosol | 41.58 | 40.39 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 37.43 | 40.35 |
| KRH18160 | Soybean | nucleus | 41.31 | 40.08 |
| PGSC0003DMT400059130 | Potato | cytosol | 41.58 | 39.97 |
| KRH38748 | Soybean | nucleus | 43.18 | 39.78 |
| Solyc01g044270.2.1 | Tomato | cytosol | 41.04 | 39.46 |
| AT5G53150.3 | Thale cress | cytosol | 39.71 | 39.34 |
| CDX99362 | Canola | nucleus | 14.71 | 38.6 |
| AT5G37380.6 | Thale cress | nucleus | 22.06 | 38.28 |
| KRH73997 | Soybean | nucleus | 35.96 | 38.16 |
| Bra034258.1-P | Field mustard | cytosol | 31.42 | 37.96 |
| KRH14137 | Soybean | nucleus | 35.83 | 37.91 |
| CDY35353 | Canola | cytosol | 31.55 | 37.88 |
| CDX76994 | Canola | nucleus | 29.28 | 37.63 |
| CDY09330 | Canola | cytosol | 11.23 | 37.33 |
| Os04t0388800-01 | Rice | nucleus | 29.55 | 36.96 |
| Os01t0923800-01 | Rice | nucleus | 36.36 | 36.56 |
| CDY60893 | Canola | cytosol | 7.75 | 36.48 |
| CDY60894 | Canola | cytosol | 7.75 | 36.48 |
| CDX76473 | Canola | cytosol | 11.63 | 35.95 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 42.25 | 35.67 |
| AT2G25560.1 | Thale cress | cytosol | 31.15 | 35.52 |
| CDX76474 | Canola | cytosol | 11.36 | 35.42 |
| CDX76752 | Canola | nucleus | 29.28 | 35.38 |
| CDX78942 | Canola | cytosol | 14.44 | 35.29 |
| PGSC0003DMT400039476 | Potato | nucleus | 37.83 | 35.16 |
| CDY11521 | Canola | nucleus | 27.54 | 34.8 |
| CDY60890 | Canola | cytosol | 11.23 | 34.71 |
| Bra007790.1-P | Field mustard | nucleus | 27.41 | 34.63 |
| CDX99360 | Canola | cytosol | 15.11 | 33.93 |
| AT5G35753.1 | Thale cress | cytosol | 19.39 | 33.8 |
| Bra035378.1-P | Field mustard | cytosol | 30.48 | 33.14 |
| KRH54176 | Soybean | nucleus | 34.89 | 32.91 |
| KRH63773 | Soybean | nucleus | 35.7 | 32.84 |
| AT5G50115.1 | Thale cress | cytosol | 21.26 | 32.78 |
| PGSC0003DMT400015678 | Potato | nucleus | 34.49 | 32.74 |
| CDY47298 | Canola | cytosol | 25.53 | 32.71 |
| Bra013179.1-P | Field mustard | nucleus | 30.21 | 32.61 |
| CDX93081 | Canola | nucleus | 30.21 | 32.61 |
| Solyc07g047690.1.1 | Tomato | nucleus | 34.22 | 32.49 |
| CDY15046 | Canola | nucleus | 29.95 | 32.46 |
| AT2G05230.1 | Thale cress | cytosol | 30.61 | 32.44 |
| AT2G05250.1 | Thale cress | cytosol | 30.61 | 32.44 |
| CDX74632 | Canola | cytosol | 25.4 | 32.37 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.49 | 32.27 |
| PGSC0003DMT400048481 | Potato | cytosol | 33.69 | 32.18 |
| Bra020955.1-P | Field mustard | cytosol | 12.03 | 31.91 |
| Solyc05g040050.1.1 | Tomato | nucleus | 33.29 | 31.8 |
| Solyc03g019640.1.1 | Tomato | nucleus | 39.04 | 31.43 |
| PGSC0003DMT400085016 | Potato | cytosol | 5.35 | 30.77 |
| Bra020956.1-P | Field mustard | nucleus | 13.9 | 29.8 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 8.56 | 29.36 |
| AT4G19580.1 | Thale cress | cytosol | 12.03 | 28.85 |
| CDY12569 | Canola | cytosol | 13.77 | 28.77 |
| Bra040300.1-P | Field mustard | cytosol | 14.17 | 28.73 |
| PGSC0003DMT400092645 | Potato | cytosol | 4.68 | 27.13 |
| Os06t0111700-01 | Rice | nucleus | 16.84 | 26.36 |
| Bra013403.1-P | Field mustard | nucleus | 18.98 | 26.2 |
| CDX78941 | Canola | nucleus | 18.98 | 25.72 |
| PGSC0003DMT400092668 | Potato | cytosol | 4.95 | 25.0 |
| Bra013404.1-P | Field mustard | nucleus | 14.57 | 24.44 |
| Solyc01g057650.1.1 | Tomato | cytosol | 5.21 | 22.81 |
| AT5G62780.1 | Thale cress | cytosol | 6.28 | 22.71 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 8.56 | 22.46 |
| AT4G19570.1 | Thale cress | nucleus | 16.18 | 21.68 |
| Os01t0375100-01 | Rice | nucleus | 26.34 | 19.54 |
| Solyc07g039220.1.1 | Tomato | cytosol | 9.09 | 19.26 |
| Os06t0535300-01 | Rice | nucleus | 25.94 | 19.06 |
| Os11t0573800-00 | Rice | nucleus | 22.19 | 18.08 |
| Os03t0831000-00 | Rice | plastid | 6.28 | 18.08 |
| Os11t0578100-00 | Rice | cytosol | 25.4 | 18.04 |
| PGSC0003DMT400080343 | Potato | cytosol | 14.57 | 17.67 |
| Solyc01g057750.1.1 | Tomato | cytosol | 14.57 | 17.58 |
| PGSC0003DMT400096427 | Potato | cytosol | 14.17 | 17.24 |
| Os11t0578500-01 | Rice | nucleus | 13.5 | 16.19 |
| Os11t0574200-00 | Rice | cytosol | 6.02 | 13.76 |
| Os01t0927400-01 | Rice | cytosol | 10.56 | 12.64 |
| Os11t0578225-00 | Rice | cytosol | 1.07 | 5.8 |
| Bra002184.1-P | Field mustard | cytosol | 0.13 | 0.38 |
| Os11t0578250-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:4333061 | ProteinID:AAK52144.1 | ProteinID:ABF96466.1 | ProteinID:BAF12232.1 |
| ProteinID:BAS84601.1 | ncoils:Coil | InterPro:DUF3444 | InterPro:DnaJ_domain | ProteinID:EAZ27242.1 | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | EnsemblPlantsGene:Os03g0401200 | EnsemblPlants:Os03t0401200-01 | PFAM:PF00226 | PFAM:PF11926 |
| PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | UniProt:Q94H83 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI00000A4839 | RefSeq:XP_015629842.1 | SEG:seg | : | : |
Description
DnaJ domain protein C30Similar to DnaJ homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) (Heat shock protein 40 homolog) (HSP40 homolog). (Os03t0401200-01)
Coordinates
chr3:-:16293784..16297120
Molecular Weight (calculated)
83409.8 Da
IEP (calculated)
7.735
GRAVY (calculated)
-0.698
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNKDEALR AKEIAERKFE SKDLQGAKKF ALKAQALFPG LEGIVQMITT LDLYLASEVL ISGEKDWYSI LSVESSADDE TLKKQYRKLV LQLHPDKNKS
101: VGAEGAFKMV QEAWTVLSDK TKRALYDQKR KLMVLKRNTS QTNKASAAPG ASNGFYNFAA NAAASKVTRG NKQKAGPATS SVRQRPPPPP PPPRQAPAPP
201: PAKPPTFWTS CNKCKMNYEY LKVYLNHNLL CPTCREPFLA QEVPMPPTES VHAVHDPNIS GANQNTNGSR NFQWGPFSRT AGAASATASS AAAAQAANVV
301: HHTYEKVRRE REEAQAAARR EEALRRKYNP PKRQANISEN LNLGTGGNSS KKMRTMGNDI GIGSSSILSG SGANYFGVPG GNISFSTNSG AHHFQGVNGG
401: FSWKPRPPTR ISLVKTFTQF DVRGILMEKA KSDLKDKLKE MQTKRSQVAA NGKKNKKNMF KESGGDDESL ASDDSTARQA AHVDPEDNAS VNSTDADDEN
501: DDPLSYNVPD PDFHDFDKDR TEECFQSDQI WATYDDEDGM PRYYAFIQKV LSLEPFQLKI SFLTSRTNSE FGSLNWVSSG FTKTCGDFRI CRYETCDILN
601: MFSHQIKWEK GPRGVIKIYP QKGNIWAVYR NWSPDWDEDT PDKVLHAYDV VEVLDEYDED LGISVIPLVK VAGFRTVFQR NQDLNAIKKI PKEEMFRFSH
701: EVPFYRMSGE EAPNVPKDSY ELDPAAISKE LLQEITETVE SSKATSEC
101: VGAEGAFKMV QEAWTVLSDK TKRALYDQKR KLMVLKRNTS QTNKASAAPG ASNGFYNFAA NAAASKVTRG NKQKAGPATS SVRQRPPPPP PPPRQAPAPP
201: PAKPPTFWTS CNKCKMNYEY LKVYLNHNLL CPTCREPFLA QEVPMPPTES VHAVHDPNIS GANQNTNGSR NFQWGPFSRT AGAASATASS AAAAQAANVV
301: HHTYEKVRRE REEAQAAARR EEALRRKYNP PKRQANISEN LNLGTGGNSS KKMRTMGNDI GIGSSSILSG SGANYFGVPG GNISFSTNSG AHHFQGVNGG
401: FSWKPRPPTR ISLVKTFTQF DVRGILMEKA KSDLKDKLKE MQTKRSQVAA NGKKNKKNMF KESGGDDESL ASDDSTARQA AHVDPEDNAS VNSTDADDEN
501: DDPLSYNVPD PDFHDFDKDR TEECFQSDQI WATYDDEDGM PRYYAFIQKV LSLEPFQLKI SFLTSRTNSE FGSLNWVSSG FTKTCGDFRI CRYETCDILN
601: MFSHQIKWEK GPRGVIKIYP QKGNIWAVYR NWSPDWDEDT PDKVLHAYDV VEVLDEYDED LGISVIPLVK VAGFRTVFQR NQDLNAIKKI PKEEMFRFSH
701: EVPFYRMSGE EAPNVPKDSY ELDPAAISKE LLQEITETVE SSKATSEC
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.