Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0574200-00 | Rice | cytosol | 22.22 | 17.74 |
| Os11t0578100-00 | Rice | cytosol | 57.85 | 14.34 |
| KXG32108 | Sorghum | cytosol | 31.03 | 13.43 |
| Os01t0375100-01 | Rice | nucleus | 45.98 | 11.9 |
| Os01t0927400-01 | Rice | cytosol | 21.84 | 9.12 |
| Os06t0535300-01 | Rice | nucleus | 34.1 | 8.74 |
| Os11t0573800-00 | Rice | nucleus | 5.75 | 1.63 |
| Os03t0831000-00 | Rice | plastid | 0.38 | 0.38 |
| Os01t0923800-01 | Rice | nucleus | 0.0 | 0.0 |
| Os02t0510000-01 | Rice | cytosol | 0.0 | 0.0 |
| Os03t0401200-01 | Rice | cytosol | 0.0 | 0.0 |
| Os04t0388800-01 | Rice | nucleus | 0.0 | 0.0 |
| Os06t0111700-01 | Rice | nucleus | 0.0 | 0.0 |
| Os11t0578225-00 | Rice | cytosol | 0.0 | 0.0 |
| Os11t0578500-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os11t0578250-00 | EnsemblPlantsGene:Os11g0578250 | InterPro:DUF3444 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF27 | PFAM:PF11926 |
| ProteinID:BAT14589.1 | UniParc:UPI00039395EF | UniProt:A0A0P0Y3Y3 | MapMan:35.2 | : | : |
Description
Domain of unknown function DUF3444 domain containing protein. (Os11t0578250-00)
Coordinates
chr11:+:21820326..21821162
Molecular Weight (calculated)
30314.3 Da
IEP (calculated)
9.514
GRAVY (calculated)
-0.438
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: IWALYSDVDK FPKFYGWISK VERQPFIVHL IWLEASPEYE QEKRWLEQDL PVSCGKFKIR DWKARYERNY SFSHLVHTGQ NGSNRQIEIL PQVGEIWCIY
101: KNWTPPSVDT CEFVIGEIVG RTEESIKISP LTQLNGFRAV FMPDKRNTVV EIPTRDRLRF SHRIPSFLLT EERGGRLRGF YELDPASVPD VFLYRNTVMG
201: WSGMRGVPGT KAAVAADALV SMSARASATH PPLLRNLTKH FNSTHNRHSM TYECHSRLLR Q
101: KNWTPPSVDT CEFVIGEIVG RTEESIKISP LTQLNGFRAV FMPDKRNTVV EIPTRDRLRF SHRIPSFLLT EERGGRLRGF YELDPASVPD VFLYRNTVMG
201: WSGMRGVPGT KAAVAADALV SMSARASATH PPLLRNLTKH FNSTHNRHSM TYECHSRLLR Q
001: MPTNSTYFLG QYPAHGYEYV TNESYDWSSY VGTSPGNLES NRMSSASNGY PYKLNNGVVL IKASRPEKKR NVGLGSSGNG FVENITKSNP ESKATNLDAK
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G35753]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.