Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039473 | Potato | nucleus | 22.44 | 47.3 |
| Solyc03g019630.1.1 | Tomato | nucleus | 22.12 | 44.23 |
| KRG89459 | Soybean | cytosol | 13.14 | 37.61 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 25.0 | 35.45 |
| AT4G19590.2 | Thale cress | nucleus | 41.99 | 35.03 |
| AT5G37750.1 | Thale cress | cytosol | 26.28 | 34.02 |
| AT5G37440.1 | Thale cress | cytosol | 26.6 | 28.92 |
| AT5G37760.1 | Thale cress | cytosol | 18.59 | 28.02 |
| CDY12569 | Canola | cytosol | 31.41 | 27.37 |
| AT5G62780.1 | Thale cress | cytosol | 17.95 | 27.05 |
| Bra040300.1-P | Field mustard | cytosol | 31.73 | 26.83 |
| AT4G19570.1 | Thale cress | nucleus | 34.94 | 19.53 |
| AT5G37380.6 | Thale cress | nucleus | 26.6 | 19.26 |
| AT3G06778.1 | Thale cress | cytosol | 11.86 | 16.16 |
| AT5G53150.3 | Thale cress | cytosol | 36.86 | 15.23 |
| GSMUA_Achr10P... | Banana | cytosol | 27.56 | 14.03 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 26.28 | 13.62 |
| GSMUA_Achr11P... | Banana | cytosol | 20.19 | 12.55 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 29.49 | 12.4 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 29.49 | 12.33 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 29.17 | 12.26 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 22.76 | 12.24 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 20.83 | 12.08 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 27.56 | 12.08 |
| AT2G25560.1 | Thale cress | cytosol | 25.32 | 12.04 |
| Os03t0401200-01 | Rice | cytosol | 28.85 | 12.03 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 28.21 | 11.56 |
| Zm00001d025585_P001 | Maize | cytosol | 26.92 | 11.46 |
| Os02t0510000-01 | Rice | cytosol | 26.92 | 11.44 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 27.88 | 11.43 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 25.64 | 11.33 |
| Zm00001d025584_P001 | Maize | cytosol | 26.6 | 11.32 |
| EES10933 | Sorghum | cytosol | 25.64 | 11.05 |
| EES10633 | Sorghum | cytosol | 25.96 | 11.02 |
| EES07899 | Sorghum | cytosol | 25.96 | 11.02 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 25.64 | 10.91 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 25.64 | 10.91 |
| Zm00001d025238_P001 | Maize | cytosol | 25.64 | 10.9 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 18.27 | 10.9 |
| Zm00001d003948_P001 | Maize | cytosol | 25.32 | 10.73 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 24.68 | 10.61 |
| OQU85000 | Sorghum | cytosol | 24.68 | 10.58 |
| Os01t0923800-01 | Rice | nucleus | 25.0 | 10.48 |
| AT3G06340.4 | Thale cress | cytosol | 22.12 | 10.25 |
| AT2G35540.1 | Thale cress | nucleus | 18.59 | 9.83 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 24.68 | 9.73 |
| AT2G05250.1 | Thale cress | cytosol | 21.79 | 9.63 |
| AT2G05230.1 | Thale cress | cytosol | 21.79 | 9.63 |
| KXG34016 | Sorghum | nucleus | 25.32 | 9.53 |
| Zm00001d011997_P001 | Maize | nucleus | 25.0 | 9.49 |
| AT5G50115.1 | Thale cress | cytosol | 13.78 | 8.87 |
| AT5G18750.1 | Thale cress | nucleus | 22.76 | 8.03 |
| Zm00001d050565_P001 | Maize | cytosol | 15.38 | 7.45 |
| AT3G04980.2 | Thale cress | nucleus | 25.64 | 6.76 |
| AT5G27240.1 | Thale cress | nucleus | 23.72 | 6.7 |
| AT3G04960.3 | Thale cress | cytosol | 8.33 | 4.3 |
| AT5G18740.1 | Thale cress | nucleus | 5.45 | 3.95 |
| AT3G05110.1 | Thale cress | nucleus | 3.21 | 2.69 |
| Os04t0388800-01 | Rice | nucleus | 4.17 | 2.17 |
| AT4G27980.2 | Thale cress | cytosol | 4.17 | 2.16 |
| AT5G35753.1 | Thale cress | cytosol | 0.96 | 0.7 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 0.32 | 0.29 |
| AT5G18730.1 | Thale cress | cytosol | 0.32 | 0.19 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:827700 | ProteinID:AEE84201.1 | ArrayExpress:AT4G19580 | EnsemblPlantsGene:AT4G19580 |
| RefSeq:AT4G19580 | TAIR:AT4G19580 | RefSeq:AT4G19580-TAIR-G | EnsemblPlants:AT4G19580.1 | TAIR:AT4G19580.1 | Unigene:At.54411 |
| InterPro:DnaJ_domain | UniProt:F4JT89 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_193693.5 |
| PFAM:PF00226 | PFAM:PF03716 | PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0001E92F29 | InterPro:WCCH | SEG:seg | : | : |
Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JT89]
Coordinates
chr4:+:10668367..10669452
Molecular Weight (calculated)
35604.6 Da
IEP (calculated)
9.410
GRAVY (calculated)
-1.126
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCNKEEAKK AMDIAEKKLS KNDYDGAKTF ISKAQALYPK LDGLEQVVMM IDVYISASNK INGEADWYGI LGIDPLADEE AVKKQYKKLA LLLHPDKNRF
101: NGAEGAFKLV RHARDLLSDQ PCLIYNVQGQ TQTQKSQNHT RTRTCVAYDH KRKPKQVKRK RSRTQDPPKP HKYKYKYEFR KRNRMHKPHE YAYECNSDSS
201: ESDPEPDSSW KQKKPRKQEE DITFWTVCKN NKCNTHCKLG KAEVIPEMKY GRPVYSFNAK FQPTSKSTSD ASSSSTTSTS DTANEAQDRE SSQEEFVPAN
301: ASPAARGDAN EA
101: NGAEGAFKLV RHARDLLSDQ PCLIYNVQGQ TQTQKSQNHT RTRTCVAYDH KRKPKQVKRK RSRTQDPPKP HKYKYKYEFR KRNRMHKPHE YAYECNSDSS
201: ESDPEPDSSW KQKKPRKQEE DITFWTVCKN NKCNTHCKLG KAEVIPEMKY GRPVYSFNAK FQPTSKSTSD ASSSSTTSTS DTANEAQDRE SSQEEFVPAN
301: ASPAARGDAN EA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.