Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G37750.1 | Thale cress | cytosol | 73.17 | 87.14 |
| AT5G37760.1 | Thale cress | cytosol | 27.87 | 38.65 |
| AT5G62780.1 | Thale cress | cytosol | 24.74 | 34.3 |
| AT4G19580.1 | Thale cress | cytosol | 28.92 | 26.6 |
| AT4G19590.2 | Thale cress | nucleus | 31.71 | 24.33 |
| AT4G19570.1 | Thale cress | nucleus | 42.51 | 21.86 |
| AT5G37380.6 | Thale cress | nucleus | 26.48 | 17.63 |
| AT3G06778.1 | Thale cress | cytosol | 13.24 | 16.59 |
| AT5G53150.3 | Thale cress | cytosol | 34.84 | 13.24 |
| AT2G25560.1 | Thale cress | cytosol | 29.27 | 12.8 |
| AT2G05250.1 | Thale cress | cytosol | 27.53 | 11.19 |
| AT2G05230.1 | Thale cress | cytosol | 27.53 | 11.19 |
| AT2G35540.1 | Thale cress | nucleus | 20.91 | 10.17 |
| AT3G06340.4 | Thale cress | cytosol | 23.34 | 9.96 |
| AT5G50115.1 | Thale cress | cytosol | 16.03 | 9.48 |
| AT5G18750.1 | Thale cress | nucleus | 24.04 | 7.81 |
| AT3G04980.2 | Thale cress | nucleus | 30.66 | 7.44 |
| AT5G27240.1 | Thale cress | nucleus | 26.48 | 6.88 |
| AT3G04960.3 | Thale cress | cytosol | 11.5 | 5.45 |
| AT5G18740.1 | Thale cress | nucleus | 8.01 | 5.35 |
| AT3G05110.1 | Thale cress | nucleus | 5.92 | 4.57 |
| AT4G27980.2 | Thale cress | cytosol | 8.71 | 4.15 |
| AT5G35753.1 | Thale cress | cytosol | 4.53 | 3.03 |
| AT5G18730.1 | Thale cress | cytosol | 4.53 | 2.46 |
| PGSC0003DMT400094016 | Potato | nucleus | 2.44 | 2.39 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 2.09 | 1.75 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:833720 | ProteinID:AED94188.1 | ArrayExpress:AT5G37440 | EnsemblPlantsGene:AT5G37440 |
| RefSeq:AT5G37440 | TAIR:AT5G37440 | RefSeq:AT5G37440-TAIR-G | EnsemblPlants:AT5G37440.1 | TAIR:AT5G37440.1 | ProteinID:BAB10965.1 |
| EMBL:BT022068 | EMBL:BT024506 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| RefSeq:NP_198560.1 | PFAM:PF00226 | PO:PO:0000293 | PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 |
| UniProt:Q9FG44 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI00000A3E09 | SEG:seg | : |
Description
At5g37440 [Source:UniProtKB/TrEMBL;Acc:Q9FG44]
Coordinates
chr5:-:14844334..14845685
Molecular Weight (calculated)
32550.7 Da
IEP (calculated)
10.188
GRAVY (calculated)
-0.768
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFVTVENK PLPTDMEFTM EEATKIVERK LSEKDYVGAK NFINNAFNLF PSLDARWKTM IDVYISGSNV GESDWYGVLG VDPLSDDETV KKHYKQLALL
101: LHPDKNKCYG AEGAFKLVSE AWCLLSDKLQ RSSYDQRRKK SKQGKSSKPK AADSSKQRKS RTFWTMCRSC KTKGEFLRHW NLNKAILCPN CRQIFIATEI
201: TTKEPNKSTK KSSHQQQQWS VQDKVPIKST KNASSSPSVT FTWNCSSTKA RSNCGSAANQ KLKRGFESQE TVAPAEKIIK KARTYVS
101: LHPDKNKCYG AEGAFKLVSE AWCLLSDKLQ RSSYDQRRKK SKQGKSSKPK AADSSKQRKS RTFWTMCRSC KTKGEFLRHW NLNKAILCPN CRQIFIATEI
201: TTKEPNKSTK KSSHQQQQWS VQDKVPIKST KNASSSPSVT FTWNCSSTKA RSNCGSAANQ KLKRGFESQE TVAPAEKIIK KARTYVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.