Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G37750.1 | Thale cress | cytosol | 30.43 | 26.14 |
| AT5G37440.1 | Thale cress | cytosol | 34.3 | 24.74 |
| AT4G19570.1 | Thale cress | nucleus | 59.42 | 22.04 |
| CDX76474 | Canola | cytosol | 25.12 | 21.67 |
| KRG89459 | Soybean | cytosol | 11.11 | 21.1 |
| PGSC0003DMT400039473 | Potato | nucleus | 14.01 | 19.59 |
| Solyc03g019630.1.1 | Tomato | nucleus | 14.49 | 19.23 |
| AT4G19580.1 | Thale cress | cytosol | 27.05 | 17.95 |
| Bra020956.1-P | Field mustard | nucleus | 26.57 | 15.76 |
| AT4G19590.2 | Thale cress | nucleus | 24.64 | 13.64 |
| AT5G37760.1 | Thale cress | cytosol | 11.59 | 11.59 |
| AT5G37380.6 | Thale cress | nucleus | 20.29 | 9.74 |
| AT3G06778.1 | Thale cress | cytosol | 10.63 | 9.61 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 21.74 | 8.36 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 22.22 | 7.93 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 22.22 | 7.64 |
| GSMUA_Achr10P... | Banana | cytosol | 21.74 | 7.34 |
| AT5G53150.3 | Thale cress | cytosol | 26.57 | 7.28 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 26.09 | 7.24 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 25.6 | 7.14 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 25.12 | 7.01 |
| AT3G06340.4 | Thale cress | cytosol | 22.71 | 6.98 |
| AT2G25560.1 | Thale cress | cytosol | 21.74 | 6.86 |
| EES10633 | Sorghum | cytosol | 24.15 | 6.8 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 23.19 | 6.8 |
| Zm00001d025238_P001 | Maize | cytosol | 23.67 | 6.68 |
| OQU85000 | Sorghum | cytosol | 23.19 | 6.59 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 23.19 | 6.55 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 23.19 | 6.55 |
| Zm00001d003948_P001 | Maize | cytosol | 23.19 | 6.52 |
| EES07899 | Sorghum | cytosol | 22.71 | 6.39 |
| GSMUA_Achr11P... | Banana | cytosol | 15.46 | 6.37 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 15.94 | 6.31 |
| Os03t0401200-01 | Rice | cytosol | 22.71 | 6.28 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 21.74 | 6.2 |
| Os01t0923800-01 | Rice | nucleus | 22.22 | 6.18 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 21.26 | 6.18 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 22.71 | 6.18 |
| Os02t0510000-01 | Rice | cytosol | 21.74 | 6.13 |
| AT2G35540.1 | Thale cress | nucleus | 17.39 | 6.1 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 22.22 | 6.04 |
| Zm00001d025585_P001 | Maize | cytosol | 21.26 | 6.0 |
| EES10933 | Sorghum | cytosol | 20.77 | 5.94 |
| Zm00001d025584_P001 | Maize | cytosol | 20.77 | 5.87 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 21.74 | 5.69 |
| AT2G05250.1 | Thale cress | cytosol | 19.32 | 5.67 |
| AT2G05230.1 | Thale cress | cytosol | 19.32 | 5.67 |
| Zm00001d011997_P001 | Maize | nucleus | 22.22 | 5.6 |
| Zm00001d050565_P001 | Maize | cytosol | 17.39 | 5.59 |
| KXG34016 | Sorghum | nucleus | 22.22 | 5.55 |
| AT5G18750.1 | Thale cress | nucleus | 22.22 | 5.2 |
| AT5G50115.1 | Thale cress | cytosol | 11.11 | 4.74 |
| AT3G04980.2 | Thale cress | nucleus | 22.71 | 3.97 |
| AT5G18740.1 | Thale cress | nucleus | 8.21 | 3.95 |
| AT5G27240.1 | Thale cress | nucleus | 20.77 | 3.89 |
| AT3G05110.1 | Thale cress | nucleus | 6.28 | 3.49 |
| Os04t0388800-01 | Rice | nucleus | 9.18 | 3.18 |
| AT3G04960.3 | Thale cress | cytosol | 9.18 | 3.14 |
| AT5G18730.1 | Thale cress | cytosol | 6.28 | 2.46 |
| AT5G35753.1 | Thale cress | cytosol | 4.35 | 2.1 |
| AT4G27980.2 | Thale cress | cytosol | 5.31 | 1.82 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 1.93 | 1.17 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:836399 | ProteinID:AED97656.1 | ArrayExpress:AT5G62780 | EnsemblPlantsGene:AT5G62780 |
| RefSeq:AT5G62780 | TAIR:AT5G62780 | RefSeq:AT5G62780-TAIR-G | EnsemblPlants:AT5G62780.1 | TAIR:AT5G62780.1 | InterPro:DnaJ_domain |
| UniProt:F4K7T4 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_201084.1 | PFAM:PF00226 |
| PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF5 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI0000162922 | SEG:seg | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K7T4]
Coordinates
chr5:+:25213386..25214137
Molecular Weight (calculated)
22938.6 Da
IEP (calculated)
7.504
GRAVY (calculated)
-0.772
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MMINVYISAS NKEEGESDWY GILGVDPLAD DETVKKHYKT LALLLHPDKN RFNGAEEPAS SSSSKPVDMT FSTVSMTFST VCNKCTTRCC HFSTQNHLNK
101: TFPCPNCGQN SAMTNISSTE VINGRTFIRV SVSPQQEEPS RANSQATSRR STRHDDANST ESFFKKPMPT TGDANSTHEA QRLFKNPMTT TGDANSTHEA
201: QRLFKNP
101: TFPCPNCGQN SAMTNISSTE VINGRTFIRV SVSPQQEEPS RANSQATSRR STRHDDANST ESFFKKPMPT TGDANSTHEA QRLFKNPMTT TGDANSTHEA
201: QRLFKNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.