Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27809 | Canola | nucleus | 53.25 | 63.51 |
| CDY41919 | Canola | nucleus, plastid | 59.51 | 59.11 |
| AT5G27240.1 | Thale cress | nucleus | 42.43 | 45.47 |
| PGSC0003DMT400057888 | Potato | cytosol | 6.26 | 37.37 |
| Bra039474.1-P | Field mustard | nucleus | 47.84 | 37.09 |
| AT5G37750.1 | Thale cress | cytosol | 6.93 | 34.02 |
| PGSC0003DMT400089411 | Potato | cytosol | 6.26 | 33.04 |
| AT5G37440.1 | Thale cress | cytosol | 7.44 | 30.66 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 28.06 | 28.4 |
| AT5G18750.1 | Thale cress | nucleus | 20.71 | 27.71 |
| AT5G37760.1 | Thale cress | cytosol | 4.82 | 27.54 |
| AT3G06340.4 | Thale cress | cytosol | 15.38 | 27.04 |
| Solyc01g098250.2.1 | Tomato | nucleus | 22.57 | 26.89 |
| Solyc08g029220.1.1 | Tomato | nucleus | 17.92 | 26.87 |
| AT4G19590.2 | Thale cress | nucleus | 8.45 | 26.74 |
| PGSC0003DMT400038431 | Potato | nucleus | 17.75 | 26.68 |
| AT5G18730.1 | Thale cress | cytosol | 11.83 | 26.52 |
| AT2G25560.1 | Thale cress | cytosol | 14.54 | 26.22 |
| AT3G05110.1 | Thale cress | nucleus | 8.2 | 26.08 |
| AT5G18740.1 | Thale cress | nucleus | 9.47 | 26.05 |
| PGSC0003DMT400057904 | Potato | nucleus | 23.5 | 25.72 |
| AT4G19580.1 | Thale cress | cytosol | 6.76 | 25.64 |
| AT5G37380.6 | Thale cress | nucleus | 9.3 | 25.52 |
| AT5G50115.1 | Thale cress | cytosol | 10.4 | 25.36 |
| Solyc10g007630.1.1 | Tomato | cytosol | 10.4 | 25.31 |
| AT5G53150.3 | Thale cress | cytosol | 15.89 | 24.9 |
| PGSC0003DMT400054841 | Potato | cytosol | 10.31 | 24.7 |
| Solyc01g098340.2.1 | Tomato | cytosol | 16.65 | 24.62 |
| AT2G35540.1 | Thale cress | nucleus | 12.17 | 24.41 |
| PGSC0003DMT400057893 | Potato | cytosol | 9.89 | 24.17 |
| PGSC0003DMT400057894 | Potato | cytosol | 7.86 | 23.97 |
| AT2G05250.1 | Thale cress | cytosol | 13.95 | 23.37 |
| AT2G05230.1 | Thale cress | cytosol | 13.95 | 23.37 |
| PGSC0003DMT400057887 | Potato | cytosol | 16.57 | 23.28 |
| AT3G06778.1 | Thale cress | cytosol | 4.48 | 23.14 |
| AT5G62780.1 | Thale cress | cytosol | 3.97 | 22.71 |
| AT3G04960.3 | Thale cress | cytosol | 11.58 | 22.64 |
| Solyc01g098310.1.1 | Tomato | cytosol | 8.62 | 22.37 |
| AT4G27980.2 | Thale cress | cytosol | 10.48 | 20.56 |
| AT5G35753.1 | Thale cress | cytosol | 7.44 | 20.51 |
| AT4G19570.1 | Thale cress | nucleus | 9.64 | 20.43 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 5.83 | 20.18 |
| Solyc01g098330.1.1 | Tomato | nucleus | 6.51 | 18.78 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:819658 | UniProt:A0A1I9LPC5 | ProteinID:AAG51418.1 | ProteinID:AEE74171.1 |
| ProteinID:ANM64432.1 | ProteinID:ANM64433.1 | ArrayExpress:AT3G04980 | EnsemblPlantsGene:AT3G04980 | RefSeq:AT3G04980 | TAIR:AT3G04980 |
| RefSeq:AT3G04980-TAIR-G | EnsemblPlants:AT3G04980.2 | Unigene:At.65063 | InterPro:DUF3444 | InterPro:DnaJ_domain | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | RefSeq:NP_001326461.1 | RefSeq:NP_001326462.1 | RefSeq:NP_187149.1 | PFAM:PF00226 | PFAM:PF11926 |
| PRINTS:PR00625 | PFscan:PS50076 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0008491898 | SEG:seg |
Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC5]
Coordinates
chr3:-:1378495..1383060
Molecular Weight (calculated)
131958.0 Da
IEP (calculated)
9.676
GRAVY (calculated)
-0.871
Length
1183 amino acids
Sequence
(BLAST)
(BLAST)
0001: MECNKEDAIR ASKIAEEKME AGDFVGAHKF VTKAQRLFPN LENIVQMMTI CDVHSSAIKK IKGLDDWYGV LQVQPYADAD TIKKQYRKLA LLLHPDKNKF
0101: AGAEAAFKLV GEANRLLSDQ IKRSQYDNRY RSHSMFANRH VNVYSGRHCA ATNNAAENIA GVFTFWTRCR HCGQCYKYLR EYMNTSMHCS SCQKSFVACK
0201: MRCDGVPPSS STAGRKEFQD QVMSNTSRQN ASTAAESGSS AADMGKNGKV GGKVNKKNQE KQKNGAVNRG TKKEEGCTEN DAEGRKPQTS ETGTNISAEM
0301: PKADVLKPQH QVKEEPDTSA EKSIPDLSAP QKNRAPKKKR KVVEESSKSF EVDSSDTAGA KTDTNEHNKR KSSRKKPQVS YAKEGSDGDF VSPPNKKTKS
0401: GFEFESEPNK KQTAEDNKSP KLAVSGVSSA SSHSYKGKAK KNAHSGNEDN LSAKNKVSEG CDGNGEDAAL LSKIGRVEKG YKANENSNPL DIPDLEFSVF
0501: KVERKTEDFA VNQVWSTTTD CRDGMPRKYA RVKKVLNGEF KLRITYLDPV LDKTDESIPV ACGKFKNGKT MEVKDSSIFS GQMHHLRCNN IVSIYPRKGE
0601: IWAIFREWEE EWNTSLKKHK FPYKYDFVEI VSDFHDLNGV GVAYLGKLKG SVQLFHWEPQ HGICQIQCSP KDMLRFSHKV PAVKMTGKEK ESVPPNSYEL
0701: DPAALPKDIF QVDAVDMEMD SEILKGKADG PYKVGAKAKA VQETASSPRK RQKSDDDNDD GVCSNLGEVI GGSNRSHIFS SCEVDDKNTS TKSRKDGEST
0801: DVFRLRKSPR LQTIPNHQGD EKKSAKQGNK MNTPKKMDKG LVTDSLGVDE KKTSKSRKNG EATDVFKLRK SPRLQTIPSQ QGDEMKSTKQ GNKMNTPKKT
0901: DKGLETDSLG VRKSPNGIHQ PAESQEGESS KKQGCNGEIP SLSKQNDLPT QLGGSTYKSP RTTHVSPHCK TPRRNAFDFQ NLRSEDKFEV NQIWAIYSND
1001: NGMPLEYVKI KKIETKPKFV LRGTPTELYP PSTEPVTRTV SCGEFKLLKG RPKIIPHASF SHLVKPFDSS KRFRFKVYPR KGEIWALYKN CDSTEEPDIV
1101: EVVEDNCDGE IVKVVALTAM GSSFQRKQGS DVGLIDISKA EMSRFSHQIP AIRHPKKTTR LVKGGYYWEL DPIAIPSRTI VID
0101: AGAEAAFKLV GEANRLLSDQ IKRSQYDNRY RSHSMFANRH VNVYSGRHCA ATNNAAENIA GVFTFWTRCR HCGQCYKYLR EYMNTSMHCS SCQKSFVACK
0201: MRCDGVPPSS STAGRKEFQD QVMSNTSRQN ASTAAESGSS AADMGKNGKV GGKVNKKNQE KQKNGAVNRG TKKEEGCTEN DAEGRKPQTS ETGTNISAEM
0301: PKADVLKPQH QVKEEPDTSA EKSIPDLSAP QKNRAPKKKR KVVEESSKSF EVDSSDTAGA KTDTNEHNKR KSSRKKPQVS YAKEGSDGDF VSPPNKKTKS
0401: GFEFESEPNK KQTAEDNKSP KLAVSGVSSA SSHSYKGKAK KNAHSGNEDN LSAKNKVSEG CDGNGEDAAL LSKIGRVEKG YKANENSNPL DIPDLEFSVF
0501: KVERKTEDFA VNQVWSTTTD CRDGMPRKYA RVKKVLNGEF KLRITYLDPV LDKTDESIPV ACGKFKNGKT MEVKDSSIFS GQMHHLRCNN IVSIYPRKGE
0601: IWAIFREWEE EWNTSLKKHK FPYKYDFVEI VSDFHDLNGV GVAYLGKLKG SVQLFHWEPQ HGICQIQCSP KDMLRFSHKV PAVKMTGKEK ESVPPNSYEL
0701: DPAALPKDIF QVDAVDMEMD SEILKGKADG PYKVGAKAKA VQETASSPRK RQKSDDDNDD GVCSNLGEVI GGSNRSHIFS SCEVDDKNTS TKSRKDGEST
0801: DVFRLRKSPR LQTIPNHQGD EKKSAKQGNK MNTPKKMDKG LVTDSLGVDE KKTSKSRKNG EATDVFKLRK SPRLQTIPSQ QGDEMKSTKQ GNKMNTPKKT
0901: DKGLETDSLG VRKSPNGIHQ PAESQEGESS KKQGCNGEIP SLSKQNDLPT QLGGSTYKSP RTTHVSPHCK TPRRNAFDFQ NLRSEDKFEV NQIWAIYSND
1001: NGMPLEYVKI KKIETKPKFV LRGTPTELYP PSTEPVTRTV SCGEFKLLKG RPKIIPHASF SHLVKPFDSS KRFRFKVYPR KGEIWALYKN CDSTEEPDIV
1101: EVVEDNCDGE IVKVVALTAM GSSFQRKQGS DVGLIDISKA EMSRFSHQIP AIRHPKKTTR LVKGGYYWEL DPIAIPSRTI VID
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.