Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054841 | Potato | cytosol | 89.92 | 88.46 |
| Bra039476.1-P | Field mustard | cytosol | 16.05 | 37.86 |
| CDX88917 | Canola | nucleus | 20.16 | 29.52 |
| Solyc01g057670.1.1 | Tomato | mitochondrion | 8.02 | 27.86 |
| AT5G18740.1 | Thale cress | nucleus | 20.99 | 23.72 |
| CDX92586 | Canola | nucleus | 16.67 | 23.14 |
| AT3G05110.1 | Thale cress | nucleus | 17.7 | 23.12 |
| Solyc01g098310.1.1 | Tomato | cytosol | 20.78 | 22.15 |
| Solyc01g098330.1.1 | Tomato | nucleus | 17.9 | 21.22 |
| Solyc07g039220.1.1 | Tomato | cytosol | 15.23 | 20.96 |
| Bra024236.1-P | Field mustard | nucleus | 15.84 | 20.92 |
| CDY27796 | Canola | cytosol | 21.4 | 19.66 |
| CDY41935 | Canola | cytosol | 21.4 | 19.55 |
| Solyc01g057650.1.1 | Tomato | cytosol | 6.79 | 19.3 |
| Solyc03g019630.1.1 | Tomato | nucleus | 6.17 | 19.23 |
| CDX88918 | Canola | cytosol | 20.99 | 19.17 |
| Bra039461.1-P | Field mustard | cytosol | 20.99 | 19.14 |
| GSMUA_Achr11P... | Banana | nucleus | 25.72 | 19.11 |
| Bra002183.1-P | Field mustard | nucleus | 22.22 | 19.01 |
| Bra006478.1-P | Field mustard | nucleus | 20.78 | 18.98 |
| CDY13918 | Canola | nucleus | 22.22 | 18.85 |
| AT3G04960.3 | Thale cress | cytosol | 23.46 | 18.84 |
| CDX92856 | Canola | nucleus | 18.11 | 18.72 |
| CDX70843 | Canola | extracellular, golgi | 20.78 | 18.67 |
| Solyc08g029220.1.1 | Tomato | nucleus | 30.25 | 18.63 |
| CDY29872 | Canola | cytosol | 17.08 | 18.61 |
| Bra039477.1-P | Field mustard | plastid | 20.58 | 18.59 |
| Bra006479.1-P | Field mustard | cytosol | 20.99 | 18.48 |
| CDX70837 | Canola | mitochondrion | 19.14 | 18.45 |
| Bra009972.1-P | Field mustard | nucleus | 23.87 | 18.44 |
| CDX86172 | Canola | nucleus | 23.87 | 18.44 |
| CDY27811 | Canola | nucleus | 17.9 | 18.16 |
| AT5G18730.1 | Thale cress | cytosol | 19.55 | 17.99 |
| Solyc03g007280.2.1 | Tomato | cytosol | 7.2 | 17.95 |
| KRG92798 | Soybean | cytosol | 25.93 | 17.77 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 27.98 | 17.57 |
| CDX80667 | Canola | nucleus | 23.87 | 17.44 |
| AT4G27980.2 | Thale cress | cytosol | 20.78 | 16.75 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 24.28 | 16.23 |
| Bra006476.1-P | Field mustard | nucleus | 19.55 | 16.16 |
| CDX88920 | Canola | nucleus | 19.55 | 16.16 |
| Solyc01g057750.1.1 | Tomato | cytosol | 20.58 | 16.13 |
| Solyc01g044270.2.1 | Tomato | cytosol | 25.51 | 15.94 |
| EES08665 | Sorghum | nucleus | 22.02 | 15.76 |
| CDX70840 | Canola | nucleus | 18.93 | 15.75 |
| Solyc07g047690.1.1 | Tomato | nucleus | 25.31 | 15.61 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 20.58 | 15.55 |
| Solyc05g040050.1.1 | Tomato | nucleus | 24.9 | 15.45 |
| Zm00001d040846_P001 | Maize | cytosol | 29.42 | 15.28 |
| Solyc01g067780.1.1 | Tomato | cytosol | 28.19 | 15.17 |
| Bra006473.1-P | Field mustard | plastid | 21.81 | 15.08 |
| Solyc01g098250.2.1 | Tomato | nucleus | 30.66 | 15.01 |
| CDX88924 | Canola | plastid | 21.4 | 14.71 |
| EES00793 | Sorghum | cytosol | 29.42 | 14.64 |
| Solyc01g098340.2.1 | Tomato | cytosol | 23.87 | 14.5 |
| Solyc03g019640.1.1 | Tomato | nucleus | 27.57 | 14.42 |
| Os01t0375100-01 | Rice | nucleus | 29.84 | 14.38 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 26.34 | 14.29 |
| EER88793 | Sorghum | cytosol | 27.57 | 14.13 |
| Os11t0574200-00 | Rice | cytosol | 9.47 | 14.07 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 19.34 | 14.03 |
| CDX99992 | Canola | cytosol | 27.16 | 14.03 |
| CDY19714 | Canola | nucleus | 27.57 | 13.93 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 11.93 | 13.91 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 27.78 | 13.85 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 27.57 | 13.73 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 27.57 | 13.73 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 27.37 | 13.63 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 28.19 | 13.39 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 28.19 | 13.38 |
| Zm00001d008413_P001 | Maize | cytosol | 27.78 | 13.26 |
| Zm00001d008412_P001 | Maize | cytosol | 27.78 | 13.25 |
| Os06t0535300-01 | Rice | nucleus | 27.57 | 13.16 |
| Solyc08g005300.1.1 | Tomato | nucleus | 24.69 | 13.16 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 27.98 | 13.15 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 25.51 | 13.07 |
| KRG96896 | Soybean | cytosol | 28.4 | 13.04 |
| KXG32106 | Sorghum | cytosol | 26.95 | 12.96 |
| Os11t0578100-00 | Rice | cytosol | 27.98 | 12.92 |
| Zm00001d019461_P002 | Maize | cytosol | 29.63 | 12.9 |
| KRH68628 | Soybean | cytosol | 28.19 | 12.84 |
| EER98396 | Sorghum | nucleus | 29.84 | 12.71 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 30.45 | 12.66 |
| KXG28768 | Sorghum | nucleus | 25.1 | 12.51 |
| OQU83710 | Sorghum | cytosol | 24.9 | 12.42 |
| Os11t0573800-00 | Rice | nucleus | 23.46 | 12.42 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 28.6 | 12.29 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 26.13 | 12.28 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 25.93 | 12.19 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 21.4 | 12.18 |
| CDY27809 | Canola | nucleus | 24.69 | 12.1 |
| AT5G27240.1 | Thale cress | nucleus | 27.16 | 11.96 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 21.4 | 11.95 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 29.01 | 11.83 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 19.55 | 11.8 |
| EES09993 | Sorghum | nucleus | 26.75 | 11.79 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 28.81 | 11.74 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 20.99 | 11.74 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 28.81 | 11.69 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 28.4 | 11.6 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 26.13 | 11.58 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 25.93 | 11.46 |
| Zm00001d052947_P001 | Maize | plastid | 20.37 | 11.45 |
| Solyc01g065570.2.1 | Tomato | cytosol | 5.56 | 11.34 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 19.96 | 11.24 |
| OQU83709 | Sorghum | cytosol | 25.93 | 10.84 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 20.37 | 10.77 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 19.14 | 10.76 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 20.16 | 10.66 |
| AT3G04980.2 | Thale cress | nucleus | 25.31 | 10.4 |
| CDY41917 | Canola | nucleus | 20.16 | 10.25 |
| CDY41919 | Canola | nucleus, plastid | 25.1 | 10.24 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 21.81 | 10.04 |
| KRH34003 | Soybean | cytosol | 5.97 | 9.97 |
| Bra002182.1-P | Field mustard | nucleus | 19.55 | 8.76 |
| Bra006477.1-P | Field mustard | cytosol | 23.87 | 8.44 |
| KRH34004 | Soybean | cytosol | 5.14 | 7.86 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 4.32 | 7.69 |
| CDX70841 | Canola | nucleus | 22.63 | 7.6 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 8.44 | 7.59 |
| Bra039474.1-P | Field mustard | nucleus | 23.25 | 7.4 |
| CDX88919 | Canola | cytosol | 22.63 | 6.96 |
Protein Annotations
| EnsemblPlants:Solyc10g007630.1.1 | EnsemblPlantsGene:Solyc10g007630.1 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR45089 | PFAM:PF11926 |
| UniParc:UPI000276B3C2 | UniProt:K4CXU2 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr10:+:1921861..1923321
Molecular Weight (calculated)
57077.5 Da
IEP (calculated)
4.712
GRAVY (calculated)
-0.657
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLKRICDD IEEIEDKKIG LRRGLLTLML EWKCFEQHLD LTGTRLKEWF NELESREKHM CATQESIGES LKELELVRES LNTKRVEVEE KERQISEYID
101: DLKVREEKEI SIRGMLEVFE NVLEGRLKEI DVKEKKFYEL ANELDIKEDR LKQRENEMKA REEELESAML FNKMQLDSTS QLSPRGCDSR KRERTMLVES
201: NYPFKRLKPG KSSEYSNAVD ASNADQLAMI CYDMIVRDDS ETEPETDHKG ITQVCDCPRA KFHDFDKGKN IEDFDVDQIW ACYDDLDGMP RLYARVEKVF
301: TPKFKLQMVW LEANAEEDHF INHELQISCG RFRLGSSLDV SEHLIFSHQV KCERDGYGYY LIYPTKGETW AVWSSELLDD HHRQLKYEIV EVLSDFVDDV
401: GISVSYLDKV TGFISIFERR RRGNDSFVIP ADALHRFSHK VPSFKLTETI NESFELDPAS LPDLSDRYND KFKVGNDVFS FKMDQT
101: DLKVREEKEI SIRGMLEVFE NVLEGRLKEI DVKEKKFYEL ANELDIKEDR LKQRENEMKA REEELESAML FNKMQLDSTS QLSPRGCDSR KRERTMLVES
201: NYPFKRLKPG KSSEYSNAVD ASNADQLAMI CYDMIVRDDS ETEPETDHKG ITQVCDCPRA KFHDFDKGKN IEDFDVDQIW ACYDDLDGMP RLYARVEKVF
301: TPKFKLQMVW LEANAEEDHF INHELQISCG RFRLGSSLDV SEHLIFSHQV KCERDGYGYY LIYPTKGETW AVWSSELLDD HHRQLKYEIV EVLSDFVDDV
401: GISVSYLDKV TGFISIFERR RRGNDSFVIP ADALHRFSHK VPSFKLTETI NESFELDPAS LPDLSDRYND KFKVGNDVFS FKMDQT
001: MEKEVSVRNQ ILELEKKEER LRLVEERERK IEASFSTLQE KGNESDLILL MEANVMRLVL QMQFEQVVVA QLNAQENFLG SLHDSMMKKH EELMTELEAR
101: KNEVALISKT IDAKTCDLDM KVKDFDLKQT TESERMRKET ELMETSLKQL EARENELRLL NETIQGKSME LEKKEVNFQL KHEAAARETE VKNKFLELKE
201: KKLEEREQHL ELKQRKKEKP AIRAETRKRS RLEYESPLSA EKGRYAETLI RPGKKQVQKR EAHEIIYIDE DEPFNCPDPD FHDFNNTMSS FAVGQVWALY
301: DPVDDMPRYY AEIRKVLQPQ LSLRVTWLES LQTTEEPIPA CGRFEHGKSE TSSHLMFSHE MYHTIRGQYV TINPRKGETW ALFGDWTKTW KSHSEQQKTP
401: YSYDFVEVVT EFDSDRGIGV AYLGRVEGFT SVYERAAQNG LVEIMISCDE MLRFSHRVPS FKMTGDEKEG VPAGSFELDP AAVPRVYLKD AKVKEEKMEP
501: IVLV
101: KNEVALISKT IDAKTCDLDM KVKDFDLKQT TESERMRKET ELMETSLKQL EARENELRLL NETIQGKSME LEKKEVNFQL KHEAAARETE VKNKFLELKE
201: KKLEEREQHL ELKQRKKEKP AIRAETRKRS RLEYESPLSA EKGRYAETLI RPGKKQVQKR EAHEIIYIDE DEPFNCPDPD FHDFNNTMSS FAVGQVWALY
301: DPVDDMPRYY AEIRKVLQPQ LSLRVTWLES LQTTEEPIPA CGRFEHGKSE TSSHLMFSHE MYHTIRGQYV TINPRKGETW ALFGDWTKTW KSHSEQQKTP
401: YSYDFVEVVT EFDSDRGIGV AYLGRVEGFT SVYERAAQNG LVEIMISCDE MLRFSHRVPS FKMTGDEKEG VPAGSFELDP AAVPRVYLKD AKVKEEKMEP
501: IVLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.