Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G095100.1 | Wheat | cytosol | 92.58 | 92.48 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 55.16 | 88.15 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 80.19 | 85.96 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 83.08 | 82.51 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 54.11 | 72.63 |
| PGSC0003DMT400057888 | Potato | cytosol | 9.85 | 42.93 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 48.44 | 42.83 |
| KXG32106 | Sorghum | cytosol | 47.05 | 40.16 |
| Zm00001d008412_P001 | Maize | cytosol | 46.12 | 39.06 |
| Zm00001d008413_P001 | Maize | cytosol | 45.65 | 38.7 |
| Os06t0535300-01 | Rice | nucleus | 44.5 | 37.72 |
| PGSC0003DMT400089411 | Potato | cytosol | 9.5 | 36.61 |
| Bra039476.1-P | Field mustard | cytosol | 8.23 | 34.47 |
| Bra001194.1-P | Field mustard | cytosol | 7.88 | 33.66 |
| CDX74108 | Canola | cytosol | 7.76 | 33.17 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 9.73 | 30.77 |
| PGSC0003DMT400058788 | Potato | nucleus | 16.92 | 29.86 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 26.19 | 29.2 |
| PGSC0003DMT400094016 | Potato | nucleus | 9.73 | 28.67 |
| CDX70837 | Canola | mitochondrion | 16.34 | 27.98 |
| GSMUA_Achr11P... | Banana | nucleus | 20.63 | 27.22 |
| CDX88917 | Canola | nucleus | 10.2 | 26.51 |
| PGSC0003DMT400086601 | Potato | cytosol | 6.14 | 26.37 |
| Bra006478.1-P | Field mustard | nucleus | 16.22 | 26.32 |
| CDX88918 | Canola | cytosol | 16.22 | 26.32 |
| CDY13918 | Canola | nucleus | 17.27 | 26.0 |
| Bra006479.1-P | Field mustard | cytosol | 16.45 | 25.72 |
| Bra002183.1-P | Field mustard | nucleus | 16.92 | 25.7 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 21.55 | 25.58 |
| CDX70843 | Canola | extracellular, golgi | 15.76 | 25.14 |
| CDX88920 | Canola | nucleus | 16.92 | 24.83 |
| Bra006476.1-P | Field mustard | nucleus | 16.92 | 24.83 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 23.52 | 24.31 |
| CDX70840 | Canola | nucleus | 15.99 | 23.63 |
| CDX92582 | Canola | nucleus | 22.94 | 23.52 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 27.69 | 23.34 |
| Solyc01g067780.1.1 | Tomato | cytosol | 24.33 | 23.26 |
| PGSC0003DMT400058792 | Potato | nucleus | 24.68 | 23.23 |
| Solyc01g098340.2.1 | Tomato | cytosol | 21.32 | 23.0 |
| PGSC0003DMT400057894 | Potato | cytosol | 10.2 | 22.68 |
| Bra024236.1-P | Field mustard | nucleus | 9.62 | 22.55 |
| PGSC0003DMT400057893 | Potato | cytosol | 12.63 | 22.52 |
| CDX92586 | Canola | nucleus | 9.04 | 22.29 |
| KRH21004 | Soybean | nucleus | 24.8 | 22.11 |
| KRH11282 | Soybean | nucleus | 24.68 | 22.0 |
| PGSC0003DMT400057887 | Potato | cytosol | 21.44 | 21.97 |
| KRH50936 | Soybean | nucleus | 24.1 | 21.71 |
| Solyc01g098250.2.1 | Tomato | nucleus | 24.57 | 21.35 |
| CDX88924 | Canola | plastid | 17.15 | 20.93 |
| Bra006473.1-P | Field mustard | plastid | 17.03 | 20.91 |
| Solyc01g098330.1.1 | Tomato | nucleus | 9.73 | 20.49 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 26.07 | 20.47 |
| Solyc01g098310.1.1 | Tomato | cytosol | 10.78 | 20.39 |
| CDY13919 | Canola | nucleus | 11.12 | 20.34 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 24.45 | 20.21 |
| PGSC0003DMT400057904 | Potato | nucleus | 25.14 | 20.07 |
| Solyc10g007630.1.1 | Tomato | cytosol | 11.24 | 19.96 |
| CDY29872 | Canola | cytosol | 10.31 | 19.96 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 27.46 | 19.88 |
| PGSC0003DMT400054841 | Potato | cytosol | 11.24 | 19.64 |
| Bra039477.1-P | Field mustard | plastid | 12.17 | 19.52 |
| KRH68628 | Soybean | cytosol | 23.64 | 19.12 |
| KRG96896 | Soybean | cytosol | 23.29 | 19.0 |
| PGSC0003DMT400038431 | Potato | nucleus | 17.15 | 18.81 |
| CDY08056 | Canola | nucleus | 13.56 | 18.63 |
| TraesCS3D01G434400.1 | Wheat | cytosol | 15.87 | 18.51 |
| CDY24701 | Canola | nucleus | 12.63 | 18.51 |
| KRG92798 | Soybean | cytosol | 15.18 | 18.48 |
| Solyc08g029220.1.1 | Tomato | nucleus | 16.8 | 18.38 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 24.8 | 18.31 |
| CDY27811 | Canola | nucleus | 10.08 | 18.16 |
| CDY19714 | Canola | nucleus | 20.16 | 18.09 |
| CDX99992 | Canola | cytosol | 19.58 | 17.96 |
| CDX92856 | Canola | nucleus | 9.73 | 17.87 |
| Bra020757.1-P | Field mustard | nucleus | 13.33 | 17.61 |
| CDY27809 | Canola | nucleus | 19.81 | 17.24 |
| CDY05255 | Canola | nucleus | 13.21 | 17.22 |
| CDY27796 | Canola | cytosol | 9.73 | 15.88 |
| Bra039461.1-P | Field mustard | cytosol | 9.73 | 15.76 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 13.21 | 15.55 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 7.42 | 15.35 |
| CDX80667 | Canola | nucleus | 11.82 | 15.34 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 13.21 | 15.28 |
| CDX86172 | Canola | nucleus | 11.01 | 15.1 |
| Bra009972.1-P | Field mustard | nucleus | 11.01 | 15.1 |
| CDY41935 | Canola | cytosol | 9.27 | 15.04 |
| CDY41919 | Canola | nucleus, plastid | 20.16 | 14.61 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 12.86 | 14.59 |
| Bra002182.1-P | Field mustard | nucleus | 16.34 | 13.0 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 11.24 | 11.36 |
| Bra039474.1-P | Field mustard | nucleus | 19.35 | 10.94 |
| Bra006477.1-P | Field mustard | cytosol | 17.38 | 10.91 |
| KRH34004 | Soybean | cytosol | 3.71 | 10.06 |
| CDY41917 | Canola | nucleus | 11.12 | 10.04 |
| CDX70841 | Canola | nucleus | 16.34 | 9.74 |
| CDX88919 | Canola | cytosol | 16.92 | 9.23 |
| CDX74107 | Canola | cytosol | 2.67 | 8.58 |
| KRH34003 | Soybean | cytosol | 2.55 | 7.56 |
| TraesCS5D01G508400.1 | Wheat | plastid | 2.78 | 6.72 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G077700.1 | EnsemblPlantsGene:TraesCS2D01G077700 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:33228465..33231056
Molecular Weight (calculated)
98508.3 Da
IEP (calculated)
6.178
GRAVY (calculated)
-0.457
Length
863 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLHNNCQQE QLSGSNSARP QTFWTICPAC DTKYQYHHAS SQKTVRCQSC SKAFIAHVLT DQPVPCGPEQ SVWKNAGVFS EIRLLQKFKP GQIWALYSDI
101: DKYPNCYALI EKVEPENNEV RTRWLEVCPD GELEKISIED RTVGCGTYKV GNTDGIMIYT DMKSFSHRVN AIFTGRRNSY EIYPRKDEVW ALLKGWDIGW
201: SSDAHNQKKY KYEVVQVLSD FTTGTSITVM PLVKIKVFVS LFMQSKEATP YLIRQDDTIW FSHCIPYRLM GAAESEGIPE GALELDPAAL PLNLEQPHVR
301: VVSESRSVKG SEFDAAYAGS SRGNKSHKES EGVGKRQHAT CMNAGIFAKT SVVENRDHNT PSTVEGMDAA EESDHVQAKV LCPEFFDFDQ LRDVSRFRRN
401: QIWAVYDTKC CIPRFYARIT KVTRAPKFEV HFVSLEFDPR NKAEVAWSRG ELPVACGHFM HGASHTAKET KIFSQIISYE KSRTRASFEI YPKKGEVWAL
501: FKGWDIGWSS DTKNHTDFKY EVVQVVSDFT TSTSIIAMPL VKVKGFVSLF TGLEEATPYV IPQDNTLRFS HCVPYRWMEG TERDGIPEGA VELDPDALPP
601: NLEDAFASVV PESSYTQFAV EGTDVYAESD DIIQAEFECA ESEFHEFTEM RSLNKFEPGQ IWALYNDIDR FPNYYAGIRK VDLKNNKVQV RWLYVSPRGE
701: EEKRLVNEDR PVGCGIFTVF GENDAIKTYT GTKAFSHPVC SRPTGREKEF EIIPLPREIW AVYKDWRAGW TARDFKNCDY ELVEILTHTD SSIQVKLLRK
801: VDGHRTVFRR EPSVETICKD EYLKFSHQIP RFHLTNEKGG KLLGCLELDP FSVPERFLGI DSV
101: DKYPNCYALI EKVEPENNEV RTRWLEVCPD GELEKISIED RTVGCGTYKV GNTDGIMIYT DMKSFSHRVN AIFTGRRNSY EIYPRKDEVW ALLKGWDIGW
201: SSDAHNQKKY KYEVVQVLSD FTTGTSITVM PLVKIKVFVS LFMQSKEATP YLIRQDDTIW FSHCIPYRLM GAAESEGIPE GALELDPAAL PLNLEQPHVR
301: VVSESRSVKG SEFDAAYAGS SRGNKSHKES EGVGKRQHAT CMNAGIFAKT SVVENRDHNT PSTVEGMDAA EESDHVQAKV LCPEFFDFDQ LRDVSRFRRN
401: QIWAVYDTKC CIPRFYARIT KVTRAPKFEV HFVSLEFDPR NKAEVAWSRG ELPVACGHFM HGASHTAKET KIFSQIISYE KSRTRASFEI YPKKGEVWAL
501: FKGWDIGWSS DTKNHTDFKY EVVQVVSDFT TSTSIIAMPL VKVKGFVSLF TGLEEATPYV IPQDNTLRFS HCVPYRWMEG TERDGIPEGA VELDPDALPP
601: NLEDAFASVV PESSYTQFAV EGTDVYAESD DIIQAEFECA ESEFHEFTEM RSLNKFEPGQ IWALYNDIDR FPNYYAGIRK VDLKNNKVQV RWLYVSPRGE
701: EEKRLVNEDR PVGCGIFTVF GENDAIKTYT GTKAFSHPVC SRPTGREKEF EIIPLPREIW AVYKDWRAGW TARDFKNCDY ELVEILTHTD SSIQVKLLRK
801: VDGHRTVFRR EPSVETICKD EYLKFSHQIP RFHLTNEKGG KLLGCLELDP FSVPERFLGI DSV
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.