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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88918 Canola cytosol 98.87 98.87
Bra006479.1-P Field mustard cytosol 77.82 75.0
Bra002183.1-P Field mustard nucleus 53.57 50.18
PGSC0003DMT400057888 Potato cytosol 18.23 48.99
Bra006473.1-P Field mustard plastid 58.83 44.52
PGSC0003DMT400089411 Potato cytosol 16.73 39.73
Bra001194.1-P Field mustard cytosol 14.85 39.11
Bra039476.1-P Field mustard cytosol 14.85 38.35
Bra006476.1-P Field mustard nucleus 41.54 37.59
Bra002184.1-P Field mustard cytosol 13.53 27.48
PGSC0003DMT400057894 Potato cytosol 18.05 24.74
Bra006477.1-P Field mustard cytosol 58.27 22.55
Os11t0574200-00 Rice cytosol 13.53 22.02
PGSC0003DMT400057893 Potato cytosol 19.92 21.9
Solyc01g098310.1.1 Tomato cytosol 18.61 21.71
GSMUA_Achr11P... Banana nucleus 25.94 21.1
Bra002182.1-P Field mustard nucleus 42.86 21.01
Solyc10g007630.1.1 Tomato cytosol 18.98 20.78
Bra024236.1-P Field mustard nucleus 14.29 20.65
GSMUA_Achr5P00460_001 Banana cytosol 28.2 20.63
TraesCS4A01G214500.1 Wheat nucleus 25.94 20.6
Solyc01g098340.2.1 Tomato cytosol 30.45 20.25
Solyc01g098330.1.1 Tomato nucleus 15.6 20.24
PGSC0003DMT400054841 Potato cytosol 18.61 20.04
Bra041167.1-P Field mustard cytosol, nucleus, plastid 2.44 20.0
GSMUA_Achr2P02410_001 Banana cytosol 28.57 19.64
PGSC0003DMT400057887 Potato cytosol 30.64 19.36
Bra039477.1-P Field mustard plastid 18.05 17.84
Zm00001d040846_P001 Maize cytosol 30.64 17.41
HORVU2Hr1G084660.1 Barley cytosol 27.63 16.9
Zm00001d052947_P001 Maize plastid 27.44 16.88
Solyc01g098250.2.1 Tomato nucleus 31.39 16.82
EER88793 Sorghum cytosol 29.7 16.67
TraesCS2B01G095100.1 Wheat cytosol 26.88 16.55
Bra020757.1-P Field mustard nucleus 20.3 16.54
TraesCS4B01G101500.1 Wheat cytosol 27.82 16.52
KRG92798 Soybean cytosol 21.99 16.5
EES00793 Sorghum cytosol 30.26 16.48
HORVU2Hr1G013270.2 Barley cytosol 26.88 16.46
TraesCS2D01G077700.1 Wheat cytosol 26.32 16.22
Bra039461.1-P Field mustard cytosol 16.17 16.14
TraesCS2B01G366100.1 Wheat cytosol 27.63 16.0
TraesCS2A01G347700.1 Wheat mitochondrion 27.44 15.89
Os01t0375100-01 Rice nucleus 29.89 15.77
PGSC0003DMT400057904 Potato nucleus 31.95 15.73
Bra009972.1-P Field mustard nucleus 18.42 15.58
Os11t0578100-00 Rice cytosol 30.83 15.57
TraesCS2A01G084900.1 Wheat nucleus 29.7 15.28
TraesCS3A01G213800.3 Wheat nucleus 29.32 15.25
PGSC0003DMT400038431 Potato nucleus 22.56 15.25
TraesCS3D01G215900.1 Wheat nucleus 29.14 15.14
Os06t0535300-01 Rice nucleus 28.76 15.03
KRG96896 Soybean cytosol 29.89 15.03
KRH68628 Soybean cytosol 30.08 15.0
TraesCS3B01G244000.4 Wheat nucleus 29.14 14.99
OQU83710 Sorghum cytosol 27.44 14.99
HORVU4Hr1G043860.4 Barley cytosol 26.69 14.96
Solyc08g029220.1.1 Tomato nucleus 22.18 14.96
KXG32106 Sorghum cytosol 28.38 14.94
Bra017315.1-P Field mustard nucleus 13.35 14.88
KXG28768 Sorghum nucleus 27.26 14.87
Zm00001d008412_P001 Maize cytosol 28.38 14.82
HORVU7Hr1G050080.1 Barley nucleus 28.76 14.8
HORVU6Hr1G033850.1 Barley cytosol 27.07 14.77
TraesCS6A01G167100.1 Wheat cytosol 27.07 14.75
TraesCS6B01G194500.1 Wheat cytosol 27.07 14.75
Bra034258.1-P Field mustard cytosol 17.11 14.7
TraesCS6D01G155600.1 Wheat cytosol 26.69 14.55
Zm00001d008413_P001 Maize cytosol 27.82 14.54
TraesCS2A01G080400.1 Wheat cytosol 21.99 14.53
TraesCS2D01G082800.1 Wheat nucleus 29.89 14.47
TraesCS2B01G099600.2 Wheat nucleus 29.7 14.4
EER98396 Sorghum nucleus 30.83 14.37
EES09993 Sorghum nucleus 29.51 14.23
Zm00001d019461_P002 Maize cytosol 29.32 13.98
TraesCS2D01G078000.1 Wheat cytosol 16.73 13.84
HORVU3Hr1G051850.2 Barley nucleus 29.32 13.79
Bra005331.1-P Field mustard nucleus 13.35 13.52
Bra007790.1-P Field mustard nucleus 15.04 13.51
Bra003079.1-P Field mustard cytosol 17.86 13.4
TraesCS1B01G054900.1 Wheat nucleus 29.14 13.0
TraesCS1D01G042900.1 Wheat nucleus 29.14 13.0
OQU83714 Sorghum cytosol, nucleus, plastid 25.75 12.97
HORVU1Hr1G008940.2 Barley nucleus 28.76 12.77
OQU83709 Sorghum cytosol 27.82 12.74
TraesCS1A01G042500.1 Wheat nucleus 28.2 12.61
EES08665 Sorghum nucleus 15.98 12.52
Bra035378.1-P Field mustard cytosol 15.98 12.35
Bra013179.1-P Field mustard nucleus 15.41 11.83
Bra040290.1-P Field mustard cytosol, mitochondrion 3.76 10.99
Os11t0573800-00 Rice nucleus 17.48 10.13
Bra039474.1-P Field mustard nucleus 25.38 8.85
Bra031906.1-P Field mustard cytosol 1.5 8.7
Bra001216.1-P Field mustard cytosol 3.38 7.96
TraesCS2D01G077900.1 Wheat cytosol 7.33 7.22
Bra020958.1-P Field mustard cytosol 1.32 6.86
Bra040300.1-P Field mustard cytosol 3.95 5.69
Bra013403.1-P Field mustard nucleus 4.51 4.43
Bra020957.1-P Field mustard cytosol 1.69 4.37
Bra038959.1-P Field mustard nucleus 3.01 4.16
Bra020956.1-P Field mustard nucleus 2.63 4.01
KRH34004 Soybean cytosol 1.69 2.83
KRH34003 Soybean cytosol 1.32 2.41
Bra013404.1-P Field mustard nucleus 1.5 1.79
Bra020955.1-P Field mustard cytosol 0.94 1.77
Protein Annotations
EnsemblPlants:Bra006478.1EnsemblPlants:Bra006478.1-PEnsemblPlantsGene:Bra006478InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926
UniParc:UPI000253FED1UniProt:M4CQI9MapMan:35.2:::
Description
AT5G18730 (E=6e-148) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA03:+:3687178..3689180
Molecular Weight (calculated)
59906.2 Da
IEP (calculated)
6.600
GRAVY (calculated)
-0.364
Length
532 amino acids
Sequence
(BLAST)
001: MLVDYSHEEG VAIKRSSGTA AYYLASDENV NVHSLRLSCV GGKRKRNELG GSNDDSAGLK FNDFEKLRKE VNFSVGETWA LYDEVDGMPR LYARIRKVSA
101: PSFGLRITHL EPDPDDEREV LWFEQDLPVS TGQFRLGKNE NTKDCSLFSH VIHCKEGSNT GHLIVSPRKG ETWALFKNWD IIKWSSEPDS HSSYKYEIVE
201: ILSDHADGTG VSVAFLHKAK GFASVFFRMG TGDDSDMIQV PSHSLYRFSH MIPSFKLTGT EAKGLPKDAY ELDQAALPAT TVQEKPVPSH LIPVPKPEAL
301: CLPSSEGKVI KTGQFWAFGG DYDDTPRYYG RIQKITVTQT FEQTAETKVH VCRLKATSFP QNVIKWKDKS MPVGCGTFSM LKNCSTLYPQ HLTHQIFPQT
401: SMDGNECTIL PKVGQLWVIY RLWAPHFGVG ALDEHCLDFD MVQVLDDAFN YKVLALEQVL VISEEKNKFF RAAKSRPSYC YDEDGPGVIF TIPQSKMLRF
501: SHPIPASRVT KEVDGEMIVL FEVDKKALPY GW
Best Arabidopsis Sequence Match ( AT5G18730.1 )
(BLAST)
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.