Factsheet for Bra040290.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 4
golgi 1
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	35.71	100.0
CDY34931	Canola	cytosol	91.21	73.78
Bra001216.1-P	Field mustard	cytosol	79.12	63.72
AT3G06778.1	Thale cress	cytosol	76.92	61.14
KRH02299	Soybean	cytosol	40.66	27.61
KRH50796	Soybean	cytosol, nucleus, peroxisome	36.81	26.91
GSMUA_Achr1P24750_001	Banana	cytosol	34.07	25.2
KRH12028	Soybean	cytosol	36.81	24.81
KRH37055	Soybean	cytosol	36.26	24.44
Solyc01g065570.2.1	Tomato	cytosol	31.87	24.37
GSMUA_Achr3P24140_001	Banana	nucleus	30.22	23.91
VIT_05s0077g01780.t01	Wine grape	nucleus	27.47	22.94
PGSC0003DMT400003010	Potato	nucleus	31.87	22.83
HORVU5Hr1G116070.3	Barley	cytosol	30.77	21.88
Os03t0831000-00	Rice	plastid	29.67	20.77
TraesCS4A01G365000.1	Wheat	cytosol	30.22	20.22
TraesCS5B01G508500.1	Wheat	cytosol	30.22	20.0
Bra031906.1-P	Field mustard	cytosol	9.89	19.57
KXG37199	Sorghum	cytosol	29.12	19.34
Zm00001d034749_P001	Maize	plastid	29.12	18.86
Bra020958.1-P	Field mustard	cytosol	8.79	15.69
TraesCS5D01G508400.1	Wheat	plastid	29.67	15.13
Bra020957.1-P	Field mustard	cytosol	12.09	10.68
Bra020955.1-P	Field mustard	cytosol	12.09	7.8
Bra040300.1-P	Field mustard	cytosol	14.84	7.32
Bra039476.1-P	Field mustard	cytosol	8.24	7.28
Bra001194.1-P	Field mustard	cytosol	7.69	6.93
Bra020757.1-P	Field mustard	nucleus	23.63	6.58
Bra020956.1-P	Field mustard	nucleus	12.09	6.3
Bra038959.1-P	Field mustard	nucleus	13.19	6.23
Bra007790.1-P	Field mustard	nucleus	18.68	5.74
Bra013179.1-P	Field mustard	nucleus	21.43	5.63
Bra013404.1-P	Field mustard	nucleus	13.74	5.61
Bra009972.1-P	Field mustard	nucleus	19.23	5.56
Bra035378.1-P	Field mustard	cytosol	20.88	5.52
Bra003079.1-P	Field mustard	cytosol	20.33	5.22
Bra034258.1-P	Field mustard	cytosol	17.58	5.17
Bra017315.1-P	Field mustard	nucleus	13.19	5.03
Bra005331.1-P	Field mustard	nucleus	13.74	4.76
Bra002183.1-P	Field mustard	nucleus	13.74	4.4
Bra039461.1-P	Field mustard	cytosol	12.64	4.32
Bra013403.1-P	Field mustard	nucleus	12.64	4.24
Bra024236.1-P	Field mustard	nucleus	8.24	4.08
Bra039477.1-P	Field mustard	plastid	11.54	3.9
Bra006478.1-P	Field mustard	nucleus	10.99	3.76
Bra006479.1-P	Field mustard	cytosol	10.44	3.44
Bra006473.1-P	Field mustard	plastid	11.54	2.99
Bra006476.1-P	Field mustard	nucleus	9.34	2.89
Bra006477.1-P	Field mustard	cytosol	12.64	1.67
Bra002182.1-P	Field mustard	nucleus	8.79	1.47
Bra039474.1-P	Field mustard	nucleus	11.54	1.38
Bra002184.1-P	Field mustard	cytosol	1.65	1.15

Protein Annotations

EnsemblPlants:Bra040290.1	EnsemblPlants:Bra040290.1-P	EnsemblPlantsGene:Bra040290	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44137	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SUPFAM:SSF46565	UniParc:UPI0002544AFF	UniProt:M4FGR2	MapMan:35.2	:	:

Description

AT3G06778 (E=3e-077) | heat shock protein binding / unfolded protein binding

Coordinates

chrA01:+:28075719..28076916

Molecular Weight (calculated)

21360.7 Da

IEP (calculated)

10.362

GRAVY (calculated)

-0.819

Length

182 amino acids

Sequence
(BLAST)

001: MASVFLFGHK GLSCNFTRLL ALKIHPDKNN HPKADIAFKL IHEAYLCLSD ETKRRCFNTD RRKNTCLKCS RVSHKTKENR TETKPNRFCQ TLRDIRDKFR
101: EENKVIERCL KTNGANFMGN LTEETPVFGT PKQNRFKKEL PVFNPSDYKL CGYPHVRNRV LDNNLSDWKM FMRSRSTCVH SS

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.