Factsheet for Bra006477.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88919	Canola	cytosol	94.62	82.29
Bra006473.1-P	Field mustard	plastid	35.64	69.7
Bra006478.1-P	Field mustard	nucleus	22.55	58.27
Bra006479.1-P	Field mustard	cytosol	22.69	56.52
Bra002183.1-P	Field mustard	nucleus	22.25	53.87
AT5G18740.1	Thale cress	nucleus	14.98	47.91
PGSC0003DMT400057888	Potato	cytosol	6.55	45.45
PGSC0003DMT400089411	Potato	cytosol	6.55	40.18
Bra006476.1-P	Field mustard	nucleus	17.02	39.8
Bra001194.1-P	Field mustard	cytosol	5.82	39.6
Bra002182.1-P	Field mustard	nucleus	29.82	37.79
Bra039476.1-P	Field mustard	cytosol	5.6	37.38
Bra002184.1-P	Field mustard	cytosol	5.75	30.15
PGSC0003DMT400057894	Potato	cytosol	7.05	25.0
GSMUA_Achr11P...	Banana	nucleus	11.42	24.01
Solyc10g007630.1.1	Tomato	cytosol	8.44	23.87
GSMUA_Achr5P00460_001	Banana	cytosol	12.58	23.8
PGSC0003DMT400054841	Potato	cytosol	8.36	23.28
TraesCS4A01G214500.1	Wheat	nucleus	11.13	22.84
GSMUA_Achr2P02410_001	Banana	cytosol	12.8	22.74
PGSC0003DMT400057893	Potato	cytosol	8.0	22.73
Os11t0574200-00	Rice	cytosol	5.38	22.63
Solyc01g098340.2.1	Tomato	cytosol	12.65	21.75
Bra024236.1-P	Field mustard	nucleus	5.75	21.47
Solyc01g098310.1.1	Tomato	cytosol	7.05	21.27
PGSC0003DMT400057887	Potato	cytosol	12.8	20.9
Zm00001d040846_P001	Maize	cytosol	13.96	20.51
TraesCS4B01G101500.1	Wheat	cytosol	13.24	20.31
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	0.95	20.0
Solyc01g098330.1.1	Tomato	nucleus	5.96	20.0
EER88793	Sorghum	cytosol	13.45	19.51
Bra039477.1-P	Field mustard	plastid	7.56	19.33
EES00793	Sorghum	cytosol	13.67	19.24
Solyc01g098250.2.1	Tomato	nucleus	13.89	19.23
KRG92798	Soybean	cytosol	9.89	19.18
Os01t0375100-01	Rice	nucleus	14.04	19.15
Bra020757.1-P	Field mustard	nucleus	9.09	19.14
KRH68628	Soybean	cytosol	14.55	18.74
KRG96896	Soybean	cytosol	14.33	18.62
TraesCS3A01G213800.3	Wheat	nucleus	13.67	18.38
PGSC0003DMT400057904	Potato	nucleus	14.4	18.32
HORVU2Hr1G084660.1	Barley	cytosol	11.56	18.28
Bra017315.1-P	Field mustard	nucleus	6.33	18.24
OQU83710	Sorghum	cytosol	12.87	18.17
Os11t0578100-00	Rice	cytosol	13.82	18.04
TraesCS6A01G167100.1	Wheat	cytosol	12.8	18.03
TraesCS6B01G194500.1	Wheat	cytosol	12.8	18.03
HORVU4Hr1G043860.4	Barley	cytosol	12.44	18.02
TraesCS3D01G215900.1	Wheat	nucleus	13.38	17.97
HORVU2Hr1G013270.2	Barley	cytosol	11.35	17.95
TraesCS3B01G244000.4	Wheat	nucleus	13.45	17.89
HORVU6Hr1G033850.1	Barley	cytosol	12.65	17.85
TraesCS6D01G155600.1	Wheat	cytosol	12.58	17.73
Bra039461.1-P	Field mustard	cytosol	6.84	17.64
TraesCS2A01G347700.1	Wheat	mitochondrion	11.78	17.63
TraesCS2B01G366100.1	Wheat	cytosol	11.78	17.63
Zm00001d008412_P001	Maize	cytosol	13.02	17.57
Os06t0535300-01	Rice	nucleus	12.95	17.49
Zm00001d052947_P001	Maize	plastid	10.98	17.46
KXG28768	Sorghum	nucleus	12.36	17.44
KXG32106	Sorghum	cytosol	12.8	17.41
TraesCS2A01G084900.1	Wheat	nucleus	13.09	17.41
TraesCS2D01G077700.1	Wheat	cytosol	10.91	17.38
Bra009972.1-P	Field mustard	nucleus	7.93	17.33
Bra034258.1-P	Field mustard	cytosol	7.78	17.29
TraesCS2B01G095100.1	Wheat	cytosol	10.76	17.13
HORVU7Hr1G050080.1	Barley	nucleus	12.87	17.12
Zm00001d008413_P001	Maize	cytosol	12.65	17.09
HORVU3Hr1G051850.2	Barley	nucleus	13.96	16.98
PGSC0003DMT400038431	Potato	nucleus	9.67	16.9
Solyc08g029220.1.1	Tomato	nucleus	9.6	16.73
TraesCS2B01G099600.2	Wheat	nucleus	13.16	16.5
Bra007790.1-P	Field mustard	nucleus	6.98	16.22
TraesCS2D01G082800.1	Wheat	nucleus	12.95	16.2
Bra005331.1-P	Field mustard	nucleus	6.11	16.0
Zm00001d019461_P002	Maize	cytosol	12.95	15.95
EES08665	Sorghum	nucleus	7.85	15.91
EER98396	Sorghum	nucleus	13.16	15.86
TraesCS1B01G054900.1	Wheat	nucleus	13.38	15.44
EES09993	Sorghum	nucleus	12.36	15.41
TraesCS1D01G042900.1	Wheat	nucleus	13.16	15.18
OQU83709	Sorghum	cytosol	12.8	15.15
OQU83714	Sorghum	cytosol, nucleus, plastid	11.49	14.96
TraesCS1A01G042500.1	Wheat	nucleus	12.87	14.87
HORVU1Hr1G008940.2	Barley	nucleus	12.95	14.86
Bra035378.1-P	Field mustard	cytosol	7.35	14.68
Bra013179.1-P	Field mustard	nucleus	7.35	14.57
Bra003079.1-P	Field mustard	cytosol	7.42	14.39
TraesCS2D01G078000.1	Wheat	cytosol	6.55	14.0
Bra020958.1-P	Field mustard	cytosol	1.02	13.73
TraesCS2A01G080400.1	Wheat	cytosol	7.85	13.42
Bra040290.1-P	Field mustard	cytosol, mitochondrion	1.67	12.64
Os11t0573800-00	Rice	nucleus	7.78	11.66
Bra001216.1-P	Field mustard	cytosol	1.82	11.06
Bra039474.1-P	Field mustard	nucleus	11.71	10.55
Bra020957.1-P	Field mustard	cytosol	1.38	9.22
Bra040300.1-P	Field mustard	cytosol	2.4	8.94
Bra031906.1-P	Field mustard	cytosol	0.58	8.7
TraesCS2D01G077900.1	Wheat	cytosol	3.27	8.33
Bra038959.1-P	Field mustard	nucleus	2.33	8.31
KRH34003	Soybean	cytosol	1.6	7.56
Bra020956.1-P	Field mustard	nucleus	1.89	7.45
Bra013403.1-P	Field mustard	nucleus	2.76	7.01
Bra020955.1-P	Field mustard	cytosol	1.38	6.74
KRH34004	Soybean	cytosol	1.53	6.6
Bra013404.1-P	Field mustard	nucleus	1.45	4.48

Protein Annotations

EnsemblPlants:Bra006477.1	EnsemblPlants:Bra006477.1-P	EnsemblPlantsGene:Bra006477	InterPro:DUF3444	PFAM:PF11926	SEG:seg
UniParc:UPI000253FED0	UniProt:M4CQI8	MapMan:35.2	:	:	:

Description

AT5G18730 (E=5e-154) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA03:+:3677682..3682693

Molecular Weight (calculated)

154752.0 Da

IEP (calculated)

7.907

GRAVY (calculated)

-0.553

Length

1375 amino acids

Sequence
(BLAST)

0001: MDITINGVTE TWINKESPST AIQKFWTWCT ECMVWYRLHR SFLHISNTCR SCNKEFYARE IPRQGLLPGK DSSSKDIMHK RVLIKRLRGI QQSHPVASNT
0101: RPSFWTTCRN CGHRERFLKL YVDKWFVCEK CHGETIAMEV LARSGEALFN KLFLELKPGS KKNYSSGLSC GVKVVGEKRK REEVAANGDE ASSSGNAKVD
0201: DNFGLCDSSS GGDVKPKIAE CAADLKFNDF DKVREEVNFA VGQVWALYDT TDKVPRQYAL IRKVSVPSFG LRITYLEPDP DDEEEIQWFE EDLPVSAGKF
0301: RLGKNQNTQE RSLFSHVIHC NQGSNSGHIT VSPRKGETWA LFKNWDINWS SEPDFHRSYE YEFLEILSDY ADGAAGVSVA FLHKAKGFAS VFFRMGTGGD
0401: ADGGQIPFHR LYRFSHMIPS FKLTGTDAKG VPKYAYELDQ AALPEKIPEV TVPSHLLAAL KPKPEELSFT INGKAFEAGQ IWSYIGCFDN MPRDYCRIYK
0501: ISLTQAFEQA PIYKMHAFRF KATPFPKDIT PWRHERYGEK KMPVGWGTYL LTQGSLALTP DRFSHLIVPV TSKGSNEYTI LPKVGEVWAI YRFWTPYLSA
0601: DEMEKNYVDY GIVEVLDDAL DYKVIALEPA LQFEEDERKK RVFRAAESKP LDFDDDDGSG VIFTIPRSKM LRFSHQIAAS RVTKEIDGEL KELFELDSTA
0701: VPDPKRSKLL DSLMDITIMN EASETSTTAQ SSDRSMVWTI CPFCSVRYKS YISLLNKPTR CHSCYLKFFA SESVFKGTPT KDKATQTSLS TTEKSVSSQN
0801: HITRSSLVAP TPKSQAPSPK SHAPTPKSHQ VQPKTAPSSL SPRFCAMCPF CKFKYRFPIK WFVCKCKKKF KTVEVSSSSL QPKKTATSKN QGTHFSGKAS
0901: SPGLSCAVKV GEKRQRNECG ESYNAGNRSV LHKNKRVTTD SGGAREDSES GKQVHVVDLS TTEDLMSNAI NLNQKMDRNQ DAQVGTVVEN SEDVVGNNRR
1001: GFNDNGDAGR QEESGWGKLL HQVNCSEVAL LDIIGNSGNL EVDKHSEDVL DKAVDNNRRG FNDDGDAAGR LEASEWGKQL CEADRPEVTT LPNVISNNQK
1101: LNEKNKTPGL CDSGSGDAVP VQPKMSECAG LKFNDFNKRR EDAKFSECQA ITYLEPDPVD EKEIQWFEED LPVSVGNFRF GKNKNTKDRS LFSHPIRCQG
1201: SIMTGNFTVS PRKGETWAIF KNWDIINWSS EPDSHRKYEY DIVEILSNTI DEGVSVAILH KAKGFASVFF RMGEADVIQI PSQSLYRLSH NILSFKMKRV
1301: DIKGVPKDAY ELDQAALPKA IEESVVPSHL YAKPKPEALC FPNKGKVFQT GQIWSFYSGG NDDTLPLHYC RIQKN

Best Arabidopsis Sequence Match ( AT5G18740.1 )
(BLAST)

001: MMDDTVNELL RRKKAVLNHQ IKSDLVASTL ANHQEKPQAF SLLQQKDVQT KSPGTHFSNC AVKVGEKRKR NECGGICNTE NRSMTEDVVN LSKDRNVDSK
101: RSAFSDNGDA TQEFGSGKQL PEVDCSKDPM SNAQVGAVVG NSRNLEVDQN SGLCDSESGG VVPQKISGFA GLKFNDFDKL REEVNFEVGQ TWAIFDPVDG
201: MPRLYAKIIK VSAPCFGLRI TYLEPDPDGE KELQWFEEDL PVSVGNFRLG ENKCTQDRSI FSHVIHCNEL SNTLCFSVTC RFINTCHFSV SPREGETWAL
301: FKNWDIKWSS EPDSHRKYEY EFVEILSDYA DEAGVYVAYL HKAKGFASVF LRMGTGYEGI FRILPRSLYR FSHRVPSFKL TGVKGKDMPK DAYELDQAAL
401: PETIEEIIVP SNSESNIKSK RQAIYIASKG

Arabidopsis Description

Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G18740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.