Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G215900.1 | Wheat | nucleus | 83.73 | 92.48 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 83.55 | 92.38 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 83.73 | 91.59 |
| Os01t0375100-01 | Rice | nucleus | 57.82 | 64.88 |
| EES00793 | Sorghum | cytosol | 54.55 | 63.15 |
| Zm00001d040846_P001 | Maize | cytosol | 51.19 | 61.86 |
| EER88793 | Sorghum | cytosol | 49.25 | 58.76 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 43.77 | 47.87 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 39.08 | 46.58 |
| PGSC0003DMT400057888 | Potato | cytosol | 6.98 | 39.9 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.6 | 38.39 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 26.97 | 36.53 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 8.75 | 36.26 |
| CDX74107 | Canola | cytosol | 8.22 | 34.7 |
| Bra001194.1-P | Field mustard | cytosol | 6.1 | 34.16 |
| CDX74108 | Canola | cytosol | 6.1 | 34.16 |
| PGSC0003DMT400058792 | Potato | nucleus | 27.59 | 34.02 |
| KRH11282 | Soybean | nucleus | 29.09 | 33.99 |
| Bra039476.1-P | Field mustard | cytosol | 6.19 | 33.98 |
| KRH50936 | Soybean | nucleus | 28.74 | 33.92 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 29.09 | 33.74 |
| CDY13919 | Canola | nucleus | 13.97 | 33.47 |
| KRH21004 | Soybean | nucleus | 28.38 | 33.16 |
| Solyc01g067780.1.1 | Tomato | cytosol | 25.99 | 32.56 |
| Solyc01g098250.2.1 | Tomato | nucleus | 28.47 | 32.43 |
| PGSC0003DMT400086601 | Potato | cytosol | 5.75 | 32.34 |
| CDX88917 | Canola | nucleus | 9.46 | 32.23 |
| CDY24701 | Canola | nucleus | 16.53 | 31.75 |
| PGSC0003DMT400058788 | Potato | nucleus | 13.44 | 31.08 |
| CDY08056 | Canola | nucleus | 17.15 | 30.89 |
| PGSC0003DMT400057904 | Potato | nucleus | 29.27 | 30.62 |
| CDX70837 | Canola | mitochondrion | 13.62 | 30.56 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 28.21 | 30.56 |
| CDX92582 | Canola | nucleus | 22.63 | 30.4 |
| PGSC0003DMT400094016 | Potato | nucleus | 7.87 | 30.38 |
| CDY13918 | Canola | nucleus | 15.38 | 30.37 |
| Bra002183.1-P | Field mustard | nucleus | 15.21 | 30.28 |
| PGSC0003DMT400038431 | Potato | nucleus | 21.04 | 30.24 |
| KRH34004 | Soybean | cytosol | 8.49 | 30.19 |
| Solyc08g029220.1.1 | Tomato | nucleus | 20.95 | 30.04 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 30.5 | 29.51 |
| CDX70843 | Canola | extracellular, golgi | 14.06 | 29.39 |
| Bra006478.1-P | Field mustard | nucleus | 13.79 | 29.32 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 11.41 | 29.32 |
| KRH34003 | Soybean | cytosol | 7.52 | 29.21 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 22.46 | 29.2 |
| CDX88918 | Canola | cytosol | 13.7 | 29.14 |
| Bra020757.1-P | Field mustard | nucleus | 16.8 | 29.1 |
| KRG92798 | Soybean | cytosol | 18.21 | 29.05 |
| Bra006479.1-P | Field mustard | cytosol | 14.15 | 28.99 |
| CDY05255 | Canola | nucleus | 16.89 | 28.85 |
| KRG96896 | Soybean | cytosol | 26.97 | 28.83 |
| Solyc10g007630.1.1 | Tomato | cytosol | 12.29 | 28.6 |
| KRH68628 | Soybean | cytosol | 26.97 | 28.58 |
| PGSC0003DMT400054841 | Potato | cytosol | 12.38 | 28.34 |
| Bra009972.1-P | Field mustard | nucleus | 15.74 | 28.3 |
| CDX86172 | Canola | nucleus | 15.74 | 28.3 |
| CDY19714 | Canola | nucleus | 24.05 | 28.27 |
| Solyc01g098340.2.1 | Tomato | cytosol | 19.89 | 28.12 |
| CDX99992 | Canola | cytosol | 23.34 | 28.06 |
| PGSC0003DMT400057893 | Potato | cytosol | 11.85 | 27.69 |
| CDX80667 | Canola | nucleus | 16.27 | 27.67 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 29.27 | 27.63 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 21.22 | 27.62 |
| PGSC0003DMT400057894 | Potato | cytosol | 9.46 | 27.58 |
| CDY27809 | Canola | nucleus | 24.05 | 27.42 |
| Solyc01g098310.1.1 | Tomato | cytosol | 10.96 | 27.19 |
| PGSC0003DMT400057887 | Potato | cytosol | 19.81 | 26.6 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 16.8 | 25.78 |
| CDX70840 | Canola | nucleus | 13.26 | 25.68 |
| Bra006476.1-P | Field mustard | nucleus | 13.35 | 25.68 |
| CDX88920 | Canola | nucleus | 13.35 | 25.68 |
| Bra006473.1-P | Field mustard | plastid | 15.83 | 25.46 |
| CDX88924 | Canola | plastid | 15.83 | 25.32 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 16.62 | 25.13 |
| AT4G19590.2 | Thale cress | nucleus | 8.13 | 24.6 |
| AT5G37760.1 | Thale cress | cytosol | 4.42 | 24.15 |
| CDX92586 | Canola | nucleus | 7.43 | 24.0 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 15.92 | 23.62 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 15.92 | 23.59 |
| CDY41919 | Canola | nucleus, plastid | 24.67 | 23.43 |
| Solyc01g098330.1.1 | Tomato | nucleus | 8.13 | 22.44 |
| Bra024236.1-P | Field mustard | nucleus | 7.16 | 22.01 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 4.95 | 21.88 |
| CDX92856 | Canola | nucleus | 9.02 | 21.7 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 8.58 | 21.7 |
| Bra039477.1-P | Field mustard | plastid | 10.26 | 21.56 |
| CDY27796 | Canola | cytosol | 10.08 | 21.55 |
| CDY41935 | Canola | cytosol | 10.08 | 21.43 |
| Bra039461.1-P | Field mustard | cytosol | 9.99 | 21.2 |
| CDY29872 | Canola | cytosol | 7.96 | 20.18 |
| CDY27811 | Canola | nucleus | 7.34 | 17.33 |
| HORVU3Hr1G095280.1 | Barley | nucleus | 7.52 | 17.0 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 11.05 | 14.64 |
| Bra039474.1-P | Field mustard | nucleus | 19.63 | 14.55 |
| Bra002182.1-P | Field mustard | nucleus | 13.7 | 14.29 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.22 | 14.15 |
| Bra006477.1-P | Field mustard | cytosol | 16.98 | 13.96 |
| CDX70841 | Canola | nucleus | 16.27 | 12.72 |
| CDX88919 | Canola | cytosol | 16.18 | 11.57 |
| CDY41917 | Canola | nucleus | 9.02 | 10.67 |
Protein Annotations
| EMBL:AK363628 | EnsemblPlants:HORVU3Hr1G051850.2 | EnsemblPlantsGene:HORVU3Hr1G051850 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF38 |
| PFAM:PF00226 | PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000200648F | UniProt:F2DIB0 | MapMan:35.2 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIB0]
Coordinates
chrchr3H:+:376208484..376237599
Molecular Weight (calculated)
124666.0 Da
IEP (calculated)
8.231
GRAVY (calculated)
-0.652
Length
1131 amino acids
Sequence
(BLAST)
(BLAST)
0001: MECNREEAVK AREIALKKLE SKDFVGAKRI ALKAQRIFPE LENLSQLLTV CEVHCAAEAK INELLDFYGI LQVDATADEA TIKKQYRKLA FSLHPDKNSY
0101: PGAEAAFKLV AEAHSTLSDR TKKPAYDIKW RVASRIAPKQ GSELKQATGP KQGSELKQTT GPKQGAQPKQ ATQSKKAAIP KQASVPKQAS VPKQAPMPKQ
0201: AAVPKQTAAE QMKKPGANRS SVAGCEPPVP STTAAQAIWT ICIHCKTRYQ YYSGVINHRI RCQNCTKYFV ASKLNAPDAP SVFTSNSISG VGEQSAFPSQ
0301: PDCSTKFSPS RLNGDANPSV NGAQTDGHMK SARVGGEEKV NHARAGGKRG VEFSTGNMSK SSAPSANDKA GRRMASDPAD PDLEFSTGNM SKSSAPSAND
0401: KAGRRMASDP ADPDVEFSTG NMSKSSAPSA NDKAGRRMAS DPADSDVGFS RGNMSKTSAT TADDKAGRRM ASDPGDPDVV YSKNPCSRVV DTSAEPGATG
0501: SPSPRRSARR KANNDDSTQV PPSKKRRTLK DWFSNADTSC KKMFDDNVAR ADVKTGEAHV PSKAHNKEKG STAKEGNQES VKKEFTCDAA AGKNPCDSVE
0601: LTYPDPEFFD FDKGRDVNLF AVDQVWAVYD DRDGMPRYYA RIKHVNATKS TIRYAWLEHK AVNDEEDRWT DKELPVACGK FILGKTEVSQ GALMFSHTVV
0701: PWVMGRRGCA YEIYPRKGEV WALYKGWSMQ WCSDADNHKT YEYEVVEVLS DFTTEAGVAV FPLVKIKGFV SLFGKAIDRS SFVIPSSELL RFSHNIPFYR
0801: TKGNEKVGVA GGFLELDTVS LPSNLDTSFL SVTIDKTISS GFIDASDIST PGPGNEPSAQ KENQQSGGKR IDDSLERTPR QKQKGGTANV PGSSSQLFCT
0901: SPSSIATYPD TDFYNFEEGR SYKKFERGQI WAIYSDFDKF PKYYGWVTKV DMEPFRLHLS WLEASPQLEQ EKMWLEREIP VSCGTFKIRN WRIKYDSNDA
1001: FSHLVETSQV NGQCFEIYPR VGEIWAIYNN WAPDWVPSSD DACEYAIGEI TERTEASTKF SFLTPVDGYT AVFRFDKERG ILEIPANENL RFSHHIPSYR
1101: LTEEKGDTLR GFYELDPASV PDAFLVRGGT C
0101: PGAEAAFKLV AEAHSTLSDR TKKPAYDIKW RVASRIAPKQ GSELKQATGP KQGSELKQTT GPKQGAQPKQ ATQSKKAAIP KQASVPKQAS VPKQAPMPKQ
0201: AAVPKQTAAE QMKKPGANRS SVAGCEPPVP STTAAQAIWT ICIHCKTRYQ YYSGVINHRI RCQNCTKYFV ASKLNAPDAP SVFTSNSISG VGEQSAFPSQ
0301: PDCSTKFSPS RLNGDANPSV NGAQTDGHMK SARVGGEEKV NHARAGGKRG VEFSTGNMSK SSAPSANDKA GRRMASDPAD PDLEFSTGNM SKSSAPSAND
0401: KAGRRMASDP ADPDVEFSTG NMSKSSAPSA NDKAGRRMAS DPADSDVGFS RGNMSKTSAT TADDKAGRRM ASDPGDPDVV YSKNPCSRVV DTSAEPGATG
0501: SPSPRRSARR KANNDDSTQV PPSKKRRTLK DWFSNADTSC KKMFDDNVAR ADVKTGEAHV PSKAHNKEKG STAKEGNQES VKKEFTCDAA AGKNPCDSVE
0601: LTYPDPEFFD FDKGRDVNLF AVDQVWAVYD DRDGMPRYYA RIKHVNATKS TIRYAWLEHK AVNDEEDRWT DKELPVACGK FILGKTEVSQ GALMFSHTVV
0701: PWVMGRRGCA YEIYPRKGEV WALYKGWSMQ WCSDADNHKT YEYEVVEVLS DFTTEAGVAV FPLVKIKGFV SLFGKAIDRS SFVIPSSELL RFSHNIPFYR
0801: TKGNEKVGVA GGFLELDTVS LPSNLDTSFL SVTIDKTISS GFIDASDIST PGPGNEPSAQ KENQQSGGKR IDDSLERTPR QKQKGGTANV PGSSSQLFCT
0901: SPSSIATYPD TDFYNFEEGR SYKKFERGQI WAIYSDFDKF PKYYGWVTKV DMEPFRLHLS WLEASPQLEQ EKMWLEREIP VSCGTFKIRN WRIKYDSNDA
1001: FSHLVETSQV NGQCFEIYPR VGEIWAIYNN WAPDWVPSSD DACEYAIGEI TERTEASTKF SFLTPVDGYT AVFRFDKERG ILEIPANENL RFSHHIPSYR
1101: LTEEKGDTLR GFYELDPASV PDAFLVRGGT C
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.