Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G456000.1 | Wheat | plastid | 90.16 | 89.36 |
| TraesCS7A01G033400.1 | Wheat | plastid | 89.71 | 88.91 |
| Os06t0111700-01 | Rice | nucleus | 69.13 | 64.64 |
| Zm00001d045553_P001 | Maize | cytosol | 61.74 | 57.98 |
| EES11310 | Sorghum | cytosol, plastid | 63.09 | 57.32 |
| KXG19130 | Sorghum | cytosol | 57.72 | 50.99 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 45.64 | 40.64 |
| KRH74334 | Soybean | cytosol, nucleus | 39.6 | 31.55 |
| VIT_02s0012g02290.t01 | Wine grape | nucleus | 40.72 | 30.8 |
| KRH39596 | Soybean | nucleus | 39.15 | 30.22 |
| CDY32121 | Canola | nucleus | 28.64 | 27.53 |
| Bra017315.1-P | Field mustard | nucleus | 28.86 | 27.04 |
| CDY51818 | Canola | nucleus | 23.94 | 27.02 |
| CDY40464 | Canola | nucleus | 28.86 | 26.88 |
| Bra005331.1-P | Field mustard | nucleus | 29.08 | 24.76 |
| AT2G35540.1 | Thale cress | nucleus | 32.21 | 24.41 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 20.81 | 21.14 |
| Solyc08g005300.1.1 | Tomato | nucleus | 38.48 | 18.86 |
| PGSC0003DMT400047612 | Potato | nucleus | 38.48 | 18.76 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 28.64 | 16.8 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 27.52 | 16.69 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 26.17 | 15.33 |
| HORVU3Hr1G095280.1 | Barley | nucleus | 14.09 | 12.6 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 6.71 | 11.72 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 22.82 | 10.75 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 17.67 | 10.56 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 22.82 | 10.46 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 22.82 | 9.86 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 17.67 | 9.09 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 23.94 | 8.93 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 17.0 | 8.74 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 21.7 | 8.58 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G005730.1 | EnsemblPlantsGene:HORVU7Hr1G005730 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF26 |
| PFAM:PF11926 | SEG:seg | UniParc:UPI000B481CB4 | UniProt:A0A287VF17 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr7H:-:7626877..7628893
Molecular Weight (calculated)
49057.6 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.552
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGDASTAAE ALAQAEADLS AGRLRAAQRQ ARRAARLDPD SAAASVLLAA TSVLLADAGC PRATLLLPED PKSSLASDPD AVRRHYKSLS RSLRPDDGAS
101: SYPAAAAAAQ EALRRAADAY AALKEERDAP PPPPTFWTAC AGCRLLHEFD RQYVGFRLTC PSCRRTFLGS EVPPPPPPKK HKAEKTLAEM QLQLAKRRGK
201: DHKVPQSSSS DEYDEPAESE VQEEDPVSDH SGQMTVEDSD FYNFDADRVE KCFKRGQVWA LYGDDDGMPR HYALVEMASP GRQFRAQIRW LEHQPDGKEG
301: KPCGSFKVGR EAMVSSVNVF SHLVACERVA REKYRVYPKK GSVWALHAGE YADTGRPKYD FVVFLSGYSN VHGISFGYLD KVEGFRSIFT RREIGVHAIQ
401: YLREGDVGML SHQTPAKKVS KGESSALPPG DCWELDPASL PAELLHA
101: SYPAAAAAAQ EALRRAADAY AALKEERDAP PPPPTFWTAC AGCRLLHEFD RQYVGFRLTC PSCRRTFLGS EVPPPPPPKK HKAEKTLAEM QLQLAKRRGK
201: DHKVPQSSSS DEYDEPAESE VQEEDPVSDH SGQMTVEDSD FYNFDADRVE KCFKRGQVWA LYGDDDGMPR HYALVEMASP GRQFRAQIRW LEHQPDGKEG
301: KPCGSFKVGR EAMVSSVNVF SHLVACERVA REKYRVYPKK GSVWALHAGE YADTGRPKYD FVVFLSGYSN VHGISFGYLD KVEGFRSIFT RREIGVHAIQ
401: YLREGDVGML SHQTPAKKVS KGESSALPPG DCWELDPASL PAELLHA
001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.