Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G475500.1 | Wheat | cytosol | 92.78 | 92.16 |
| TraesCS3A01G441600.4 | Wheat | cytosol | 91.84 | 91.24 |
| TraesCS3D01G434400.1 | Wheat | cytosol | 87.03 | 87.97 |
| Os01t0927400-01 | Rice | cytosol | 54.81 | 65.6 |
| KXG34037 | Sorghum | cytosol | 63.9 | 62.4 |
| Zm00001d042269_P001 | Maize | cytosol | 61.9 | 60.76 |
| VIT_14s0068g01140.t01 | Wine grape | cytosol | 34.09 | 33.91 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 24.87 | 19.08 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 22.86 | 18.02 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 24.47 | 17.7 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 10.56 | 17.67 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 10.16 | 17.27 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 25.13 | 16.62 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 19.25 | 16.57 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 18.98 | 16.32 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 25.67 | 16.03 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 15.64 | 15.88 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 5.08 | 14.84 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 14.84 | 14.55 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 14.3 | 14.04 |
| HORVU3Hr1G095280.1 | Barley | nucleus | 6.28 | 9.4 |
Protein Annotations
| EMBL:AK368345 | EnsemblPlants:HORVU3Hr1G096340.2 | EnsemblPlantsGene:HORVU3Hr1G096340 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 | PFAM:PF11926 | SUPFAM:SSF46565 | UniParc:UPI00020079B8 |
| UniProt:F2DWS7 | MapMan:35.2 | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DWS7]
Coordinates
chrchr3H:+:652671052..652674002
Molecular Weight (calculated)
84251.1 Da
IEP (calculated)
5.337
GRAVY (calculated)
-0.407
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGDGEADR EAISARMRAG DYTGARTLLL ETLQTNPGLD GAVEMLAVLE VLCAAPAGRT PHWYRALQVL PGDGAAAIEA RHRALLAQLE PVRDALPGAD
101: LALRLVHDAY KVLSDPAKRA SFDSSNTAGG SVKQMAVGAF SSAHADLRRD SISQTERMHV DGSATPLGTN PDLDRVKSVD TKHVWQVDRP FLDVGNCSNV
201: ASSSKTKRTD HCFLGDDGEF ELPEENHADK KLKSAWEKDV YSVSSSEEDP DGCFADLSDA IQDDPCSSQQ YDHHNFEEDR SIHQFATGQI WAGYDWEKFP
301: RRYARINKVL TDKMQLYVSW FKPCPQSHEE KEWLIASLPF VCGTFIAEER QMSLSSLSMF SHEISCDNVN QHLELYPRRG EAWAIYSDWD IGWCSNPEMR
401: KKSAFSAVEI LTSYSEDSGC TVAPLVKVDG FKSVFQRYMR SGREQVLQVC SDNLLMFSHM IPSFRFTHDA GTVLELEHSI VPENLQHQNT LASVTPLSPL
501: SGLHSDTNGF HEGVMNYNNN LGSGISQQGV MNYNNKLSPE DFMEGQIWAV YDARDRMPRS YVRIIHVVSD ATVFVLKLEP HPMLNEEIRW VEDGLPVACG
601: VFRAGTETTY KDISAFSHPV QCDWSSKKFF YRIFPKKGEI WAMYKNWKIT LNGTDIDKCE PRMVEILSDY TDENGVNACS LTRVKGCLSF FQRASLEDFH
701: LTRWISKSEM LSFSHRVPAF IVIEIRERDI PQGSWHLEPS ALPLRSIH
101: LALRLVHDAY KVLSDPAKRA SFDSSNTAGG SVKQMAVGAF SSAHADLRRD SISQTERMHV DGSATPLGTN PDLDRVKSVD TKHVWQVDRP FLDVGNCSNV
201: ASSSKTKRTD HCFLGDDGEF ELPEENHADK KLKSAWEKDV YSVSSSEEDP DGCFADLSDA IQDDPCSSQQ YDHHNFEEDR SIHQFATGQI WAGYDWEKFP
301: RRYARINKVL TDKMQLYVSW FKPCPQSHEE KEWLIASLPF VCGTFIAEER QMSLSSLSMF SHEISCDNVN QHLELYPRRG EAWAIYSDWD IGWCSNPEMR
401: KKSAFSAVEI LTSYSEDSGC TVAPLVKVDG FKSVFQRYMR SGREQVLQVC SDNLLMFSHM IPSFRFTHDA GTVLELEHSI VPENLQHQNT LASVTPLSPL
501: SGLHSDTNGF HEGVMNYNNN LGSGISQQGV MNYNNKLSPE DFMEGQIWAV YDARDRMPRS YVRIIHVVSD ATVFVLKLEP HPMLNEEIRW VEDGLPVACG
601: VFRAGTETTY KDISAFSHPV QCDWSSKKFF YRIFPKKGEI WAMYKNWKIT LNGTDIDKCE PRMVEILSDY TDENGVNACS LTRVKGCLSF FQRASLEDFH
701: LTRWISKSEM LSFSHRVPAF IVIEIRERDI PQGSWHLEPS ALPLRSIH
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.