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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • endoplasmic reticulum 1
  • golgi 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, endoplasmic reticulum, golgi, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:endoplasmic reticulum
MultiLoc:nucleus
Plant-mPloc:golgi, nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G042900.1 Wheat nucleus 87.06 87.5
TraesCS1B01G054900.1 Wheat nucleus 86.81 87.25
TraesCS1A01G042500.1 Wheat nucleus 86.56 87.14
EER98396 Sorghum nucleus 54.09 56.79
Zm00001d019461_P002 Maize cytosol 52.34 56.18
GSMUA_Achr11P... Banana nucleus 24.37 44.65
PGSC0003DMT400057888 Potato cytosol 6.84 41.41
GSMUA_Achr2P02410_001 Banana cytosol 26.46 40.96
GSMUA_Achr5P00460_001 Banana cytosol 23.96 39.48
PGSC0003DMT400089411 Potato cytosol 7.1 37.95
CDY13919 Canola nucleus 14.69 37.29
CDX74107 Canola cytosol 8.26 36.94
VIT_05s0020g02050.t01 Wine grape nucleus 25.54 36.65
HORVU6Hr1G033850.1 Barley cytosol 29.05 35.69
Bra039476.1-P Field mustard cytosol 6.01 34.95
KRH50936 Soybean nucleus 27.46 34.34
CDX88917 Canola nucleus 9.52 34.34
KRH11282 Soybean nucleus 27.55 34.09
CDX92582 Canola nucleus 23.71 33.73
KRH21004 Soybean nucleus 27.21 33.68
Bra001194.1-P Field mustard cytosol 5.68 33.66
CDX74108 Canola cytosol 5.51 32.67
CDY08056 Canola nucleus 17.11 32.64
Solyc01g067770.1.1 Tomato extracellular, vacuole 7.43 32.6
CDY24701 Canola nucleus 16.03 32.6
Solyc01g098250.2.1 Tomato nucleus 26.38 31.82
KRH02180 Soybean cytosol, nucleus, plastid 27.63 31.7
Solyc08g029220.1.1 Tomato nucleus 20.62 31.31
KRH34003 Soybean cytosol 7.6 31.27
HORVU4Hr1G043860.4 Barley cytosol 24.71 31.19
PGSC0003DMT400038431 Potato nucleus 20.37 31.0
KRH34004 Soybean cytosol 8.18 30.82
Solyc01g067780.1.1 Tomato cytosol 23.04 30.56
HORVU7Hr1G050080.1 Barley nucleus 26.38 30.56
VIT_14s0030g00640.t01 Wine grape nucleus 29.8 30.54
PGSC0003DMT400058792 Potato nucleus 23.37 30.53
Bra020757.1-P Field mustard nucleus 16.53 30.32
PGSC0003DMT400057904 Potato nucleus 27.21 30.16
KRG92798 Soybean cytosol 17.78 30.04
CDX70837 Canola mitochondrion 12.52 29.76
CDY05255 Canola nucleus 16.44 29.76
Bra006479.1-P Field mustard cytosol 13.69 29.71
PGSC0003DMT400058788 Potato nucleus 12.02 29.45
HORVU3Hr1G051850.2 Barley nucleus 27.63 29.27
CDX70843 Canola extracellular, golgi 13.11 29.02
Solyc10g007630.1.1 Tomato cytosol 11.69 28.81
Bra006478.1-P Field mustard nucleus 12.77 28.76
CDX88918 Canola cytosol 12.77 28.76
HORVU2Hr1G084660.1 Barley cytosol 20.78 28.62
KRG96896 Soybean cytosol 25.04 28.36
Bra009972.1-P Field mustard nucleus 14.86 28.3
CDX86172 Canola nucleus 14.86 28.3
CDX99992 Canola cytosol 22.2 28.27
PGSC0003DMT400086601 Potato cytosol 4.67 27.86
CDY19714 Canola nucleus 22.37 27.86
KRH68628 Soybean cytosol 24.79 27.84
CDX80667 Canola nucleus 15.44 27.82
HORVU2Hr1G013270.2 Barley cytosol 20.12 27.73
Bra002183.1-P Field mustard nucleus 13.11 27.64
CDY13918 Canola nucleus 13.19 27.57
PGSC0003DMT400054841 Potato cytosol 11.35 27.53
HORVU1Hr1G001860.1 Barley nucleus 10.1 27.5
PGSC0003DMT400057894 Potato cytosol 8.85 27.32
CDX70840 Canola nucleus 13.02 26.71
PGSC0003DMT400094016 Potato nucleus 6.51 26.62
Bra006476.1-P Field mustard nucleus 13.02 26.53
CDX88920 Canola nucleus 13.02 26.53
Solyc01g098340.2.1 Tomato cytosol 17.28 25.88
HORVU3Hr1G096340.2 Barley cytosol 16.03 25.67
Solyc01g098310.1.1 Tomato cytosol 9.68 25.44
HORVU4Hr1G083260.1 Barley cytosol 16.19 25.43
PGSC0003DMT400057887 Potato cytosol 17.86 25.42
PGSC0003DMT400057893 Potato cytosol 10.27 25.41
HORVU3Hr1G117190.1 Barley cytosol 16.03 25.2
Bra006473.1-P Field mustard plastid 14.69 25.04
CDY27809 Canola nucleus 20.62 24.9
CDX92586 Canola nucleus 7.26 24.86
CDX88924 Canola plastid 14.61 24.75
HORVU2Hr1G070040.6 Barley cytosol 14.86 24.15
HORVU7Hr1G005730.1 Barley cytosol 8.93 23.94
CDY41935 Canola cytosol 10.27 23.12
CDY27796 Canola cytosol 10.02 22.68
Bra039461.1-P Field mustard cytosol 10.02 22.51
Bra024236.1-P Field mustard nucleus 6.84 22.28
Solyc01g098330.1.1 Tomato nucleus 7.6 22.2
CDY41919 Canola nucleus, plastid 21.37 21.49
HORVU5Hr1G116070.3 Barley cytosol 4.59 21.48
Bra039477.1-P Field mustard plastid 9.52 21.19
CDX92856 Canola nucleus 8.1 20.64
CDY29872 Canola cytosol 7.1 19.06
CDY27811 Canola nucleus 6.43 16.08
HORVU3Hr1G095280.1 Barley nucleus 6.68 16.0
CDY13917 Canola endoplasmic reticulum, extracellular, mitochondrion 5.51 15.83
CDX70844 Canola mitochondrion, plasma membrane 10.85 15.22
Bra002182.1-P Field mustard nucleus 13.77 15.21
Bra039474.1-P Field mustard nucleus 16.69 13.11
Bra006477.1-P Field mustard cytosol 14.86 12.95
CDX70841 Canola nucleus 14.11 11.68
CDX88919 Canola cytosol 14.11 10.69
CDY41917 Canola nucleus 8.18 10.25
Protein Annotations
EnsemblPlants:HORVU1Hr1G008940.2EnsemblPlantsGene:HORVU1Hr1G008940Gene3D:1.10.287.110InterPro:DUF3444InterPro:DnaJ_domainInterPro:IPR001623
InterPro:IPR036869InterPro:J_dom_sfPFAM:PF00226PFAM:PF11926PFscan:PS50076PRINTS:PR00625
SEG:segSMART:SM00271SUPFAM:SSF46565UniParc:UPI00029621DEUniProt:M0Z646MapMan:35.2
Description
No Description!
Coordinates
chrchr1H:-:19951023..19956374
Molecular Weight (calculated)
132807.0 Da
IEP (calculated)
7.418
GRAVY (calculated)
-0.752
Length
1198 amino acids
Sequence
(BLAST)
0001: MECNKEEASR VKDVSERKLH EADFPGAKKM ALKAHQLFPG LENISQLLAV CEVHCSSSVK INGETDWYGI LQVEPTADNM VLKKQYHRLA LLLHPDKNKF
0101: AGAEAAFKLI GEAYMTLTDP VKRSSHDNKR KAVFATSAPI PKKRARASKK TDPAHKRDNK ENFGAPQTQK PQQQAGKSSG VSSFWTICLS CGTKYQYPSS
0201: SLMKFVLCRI CLRTFPAYDL SKKSVPAGVD TTSPWSGFGM QPQKFPPSQQ AHVTNQGQNN QSFPGWQHPL TGHQTHPAHQ QQQSQNVPHQ QAPGANQHHS
0301: QRCPPSAGSK NAMSSEGVGD PNNKGATDST KVSRAPSRKK FGPGRTESPF VQQSQDVPNQ QTPTANQQQQ SQRSPPSAGP TNVMSSEGVD DPNSKGATES
0401: TKVSSAPFKE QDGADRTELP FVSSAKLSPT NMQKRGIQSQ HFPRQRISPV NQQVQSQNPS FNEGSSNLNS IGMSDSNVTA NARTCNNMNV PRAAIDEENG
0501: SSRTESPLAS SDKVSRANIE KGIIKDANGA VKTGQNPQRS SQQENNVSNE DGSGRCRKAS DNLHDSPAAK RTRKGYSSCN AHKNGGTVNK DGNVYTTQKA
0601: CSIPVTKTLN ENVEVVNGLD HEEKRGASKK EEMRNSGRDG AGSSLDNSIP CEGDVSYPDP EFYDFEENRN ADGFKADQIW AVYDDSDSMP RYYARIKQVY
0701: SPNFMVWFSW LEFDPLNDAE KAWSSKEMPV ACGRFRIGKT ILTEDIKMFS HVVSWTKGSK RNSYEIYPVK GEVWALFKAC DIDRSSDSSD HKNYSYDIVE
0801: IKSNFAAGMG TYVTPLVKVQ GFVSLFVRSD KEEPYLIPGG DSLRFSHNIP FHRLSEADKL HIPNGALELD PASLPSNLEE ATLSADLNRS STQEGNVLSN
0901: RDSFKCEMPT GKTKQGLDSA ATNEGNVHNG VKKANINAGD KQDNGSEASV IDADSVDQWD DSFQSESPAT FVYPETEFFN FGDLRSFDNF KSGQIWALYC
1001: DTDKFPKYYA FIKRVDQDDL TIHIRWLEYC PCGEMEKRLV QDDLPASCGI FRVTSQSENY DCTSFFSHIM EGTTISKGKK YEILPCVGQV WAIYKNWKRG
1101: WSFENFKSCE YDLVEVLESS AASLTVSYLT KVDGFSTVFM LESKGGSTSA MKILRCDMMM FSHQVPSYRM TNEGDKLCGY WELDPASVPE NFLARKSK
Best Arabidopsis Sequence Match ( AT3G06340.1 )
(BLAST)
001: MSINRDEALR AKDLAEGLMK KTDFTAARKL AMKAQKMDSS LENISRMIMV CDVHCAATEK LFGTEMDWYG ILQVEQIAND VIIKKQYKRL ALLLHPDKNK
101: LPGAESAFKL IGEAQRILLD REKRTLHDNK RKTWRKPAAP PYKAQQMPNY HTQPHFRASV NTRNIFTELR PEIRHPFQKA QAQPAAFTHL KTFGTSCVFC
201: RVRYEYDRAH VNKEVTCETC KKRFTAFEEP LQSAPQAKGP SQTTYCFPQQ SKFPDQRACS EPHKRPENPP TVSSSKASFP MPGSTAKHNG KRKRKNVAEC
301: SESSDSESSS ESEDDVNNDT TAAQDSGSNG GEQPRRSVRS KQKVSYNENL SDDDVDLVND NGEGSGKNID TEREKETEEE KQTNENHSST ESIDMNGKIE
401: VDQVETPSGA SDSEEDLSSG SAEKPNLINY DDPDFNDFDK LREKSCFQAG QIWAVYDEEE GMPRFYALIK KVTTPDFMLR YVWFEVDQDQ ENETPNLPVS
501: VGKFVVGNIE ETNLCSIFSH FVYSTTKIRT RKFTVFPKKG EIWALFKNWD INCSADSVSP MKYEYEFVEI LSDHAEGATV SVGFLSKVQG FNCVFCPMPK
601: DESNTCEIPP HEFCRFSHSI PSFRLTGTEG RGITKGWYEL DPAALPASVS QNLSGEEAAQ DRDRQSPPSG SAS
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SQT7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.