Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88920 | Canola | nucleus | 71.14 | 42.35 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 49.71 | 41.73 |
| CDX70840 | Canola | nucleus | 69.43 | 41.61 |
| CDX88917 | Canola | nucleus | 36.86 | 38.86 |
| PGSC0003DMT400057888 | Potato | cytosol | 19.43 | 34.34 |
| CDX74108 | Canola | cytosol | 18.29 | 31.68 |
| Bra002182.1-P | Field mustard | nucleus | 94.57 | 30.51 |
| PGSC0003DMT400089411 | Potato | cytosol | 19.14 | 29.91 |
| CDX70837 | Canola | mitochondrion | 34.0 | 23.61 |
| CDX88918 | Canola | cytosol | 35.14 | 23.12 |
| CDY13918 | Canola | nucleus | 37.71 | 23.04 |
| CDX70843 | Canola | extracellular, golgi | 34.57 | 22.37 |
| CDX88924 | Canola | plastid | 39.71 | 19.66 |
| PGSC0003DMT400057894 | Potato | cytosol | 20.29 | 18.3 |
| PGSC0003DMT400057893 | Potato | cytosol | 24.0 | 17.36 |
| Solyc01g098310.1.1 | Tomato | cytosol | 22.0 | 16.89 |
| Solyc10g007630.1.1 | Tomato | cytosol | 23.14 | 16.67 |
| PGSC0003DMT400054841 | Potato | cytosol | 23.43 | 16.6 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 36.86 | 15.11 |
| CDY60893 | Canola | cytosol | 6.86 | 15.09 |
| CDY60894 | Canola | cytosol | 6.86 | 15.09 |
| Os11t0574200-00 | Rice | cytosol | 14.0 | 14.98 |
| CDY27796 | Canola | cytosol | 21.71 | 14.37 |
| CDY24701 | Canola | nucleus | 24.0 | 14.26 |
| CDY27811 | Canola | nucleus | 19.43 | 14.2 |
| CDY41935 | Canola | cytosol | 21.14 | 13.91 |
| CDY05255 | Canola | nucleus | 26.29 | 13.9 |
| CDY08056 | Canola | nucleus | 24.86 | 13.85 |
| CDY29872 | Canola | cytosol | 17.43 | 13.68 |
| CDX92856 | Canola | nucleus | 18.29 | 13.62 |
| KRG92798 | Soybean | cytosol | 27.43 | 13.54 |
| Solyc01g098330.1.1 | Tomato | nucleus | 15.71 | 13.41 |
| CDX86172 | Canola | nucleus | 23.71 | 13.2 |
| GSMUA_Achr11P... | Banana | nucleus | 24.0 | 12.84 |
| CDY47298 | Canola | cytosol | 20.86 | 12.5 |
| CDX74632 | Canola | cytosol | 20.86 | 12.44 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 25.71 | 12.38 |
| CDX80667 | Canola | nucleus | 23.14 | 12.18 |
| Solyc08g029220.1.1 | Tomato | nucleus | 27.43 | 12.17 |
| CDY51818 | Canola | nucleus | 13.71 | 12.12 |
| PGSC0003DMT400038431 | Potato | nucleus | 27.14 | 12.07 |
| CDX92582 | Canola | nucleus | 28.57 | 11.88 |
| CDX76994 | Canola | nucleus | 19.71 | 11.86 |
| CDY35353 | Canola | cytosol | 20.86 | 11.72 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 21.14 | 11.51 |
| Solyc01g098340.2.1 | Tomato | cytosol | 26.29 | 11.5 |
| PGSC0003DMT400057887 | Potato | cytosol | 27.14 | 11.28 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 24.86 | 11.24 |
| CDY13919 | Canola | nucleus | 15.14 | 11.23 |
| CDY49460 | Canola | nucleus | 20.86 | 11.2 |
| CDY32121 | Canola | nucleus | 14.29 | 10.75 |
| CDX93081 | Canola | nucleus | 21.14 | 10.68 |
| CDY19683 | Canola | cytosol | 21.14 | 10.68 |
| CDY15046 | Canola | nucleus | 20.86 | 10.58 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 20.0 | 10.45 |
| CDY40464 | Canola | nucleus | 14.29 | 10.42 |
| Solyc01g098250.2.1 | Tomato | nucleus | 29.43 | 10.37 |
| CDX76752 | Canola | nucleus | 18.0 | 10.18 |
| CDY11521 | Canola | nucleus | 17.14 | 10.14 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 22.86 | 9.94 |
| CDX99992 | Canola | cytosol | 26.0 | 9.67 |
| KRH68628 | Soybean | cytosol | 29.43 | 9.65 |
| PGSC0003DMT400057904 | Potato | nucleus | 29.71 | 9.62 |
| Zm00001d040846_P001 | Maize | cytosol | 25.71 | 9.62 |
| CDY19714 | Canola | nucleus | 26.29 | 9.56 |
| KRG96896 | Soybean | cytosol | 28.86 | 9.55 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 23.43 | 9.43 |
| CDX70841 | Canola | nucleus | 38.86 | 9.4 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 23.71 | 9.26 |
| Os06t0535300-01 | Rice | nucleus | 26.86 | 9.23 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 25.71 | 9.23 |
| Os01t0375100-01 | Rice | nucleus | 26.57 | 9.23 |
| EES08665 | Sorghum | nucleus | 17.71 | 9.13 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 25.43 | 9.12 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 25.43 | 9.12 |
| EES00793 | Sorghum | cytosol | 25.43 | 9.11 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 22.29 | 9.04 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 22.29 | 9.03 |
| CDX92583 | Canola | mitochondrion, plastid | 8.86 | 8.93 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 24.86 | 8.91 |
| EER88793 | Sorghum | cytosol | 24.0 | 8.86 |
| CDX88919 | Canola | cytosol | 40.0 | 8.86 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 24.0 | 8.85 |
| KXG28768 | Sorghum | nucleus | 24.57 | 8.82 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 23.14 | 8.81 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 22.86 | 8.71 |
| EER98396 | Sorghum | nucleus | 28.29 | 8.68 |
| Zm00001d008412_P001 | Maize | cytosol | 25.14 | 8.64 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 21.43 | 8.63 |
| OQU83710 | Sorghum | cytosol | 24.0 | 8.62 |
| CDY27809 | Canola | nucleus | 24.29 | 8.57 |
| Os11t0578100-00 | Rice | cytosol | 25.71 | 8.55 |
| Zm00001d008413_P001 | Maize | cytosol | 24.86 | 8.55 |
| KXG32106 | Sorghum | cytosol | 24.57 | 8.51 |
| Zm00001d052947_P001 | Maize | plastid | 20.86 | 8.44 |
| Zm00001d019461_P002 | Maize | cytosol | 26.86 | 8.42 |
| Os11t0573800-00 | Rice | nucleus | 22.0 | 8.39 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 24.0 | 8.12 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 23.71 | 8.11 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 23.71 | 8.03 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 23.71 | 8.03 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 23.43 | 8.01 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 24.0 | 7.66 |
| OQU83709 | Sorghum | cytosol | 25.14 | 7.57 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 23.71 | 7.55 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 22.57 | 7.48 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 24.0 | 7.43 |
| CDY41919 | Canola | nucleus, plastid | 24.86 | 7.3 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 24.86 | 7.3 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 24.86 | 7.3 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 24.86 | 7.26 |
| CDY41917 | Canola | nucleus | 19.71 | 7.22 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 24.29 | 7.14 |
| EES09993 | Sorghum | nucleus | 22.29 | 7.07 |
| CDY34931 | Canola | cytosol | 4.0 | 6.22 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 3.71 | 5.91 |
| CDX92584 | Canola | mitochondrion | 5.71 | 5.73 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 8.29 | 5.37 |
| CDX74082 | Canola | cytosol | 3.43 | 5.31 |
| CDX99362 | Canola | nucleus | 4.29 | 5.26 |
| CDX78941 | Canola | nucleus | 6.86 | 4.35 |
| CDY31307 | Canola | cytosol | 1.14 | 4.35 |
| CDX99361 | Canola | cytosol | 1.71 | 4.11 |
| CDY12569 | Canola | cytosol | 4.0 | 3.91 |
| CDX74107 | Canola | cytosol | 2.57 | 3.36 |
| CDX76474 | Canola | cytosol | 2.29 | 3.33 |
| CDY60890 | Canola | cytosol | 2.29 | 3.31 |
| CDY12382 | Canola | nucleus | 3.43 | 3.28 |
| CDY27107 | Canola | nucleus | 3.43 | 3.28 |
| KRH34003 | Soybean | cytosol | 2.57 | 3.09 |
| CDX99360 | Canola | cytosol | 2.86 | 3.0 |
| CDX76476 | Canola | cytosol | 0.86 | 2.94 |
| CDX78942 | Canola | cytosol | 2.57 | 2.94 |
| CDX76475 | Canola | cytosol | 1.71 | 2.91 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.43 | 2.87 |
| KRH34004 | Soybean | cytosol | 1.71 | 1.89 |
| CDY09330 | Canola | cytosol | 1.14 | 1.78 |
| CDX76473 | Canola | cytosol | 1.14 | 1.65 |
| CDY08035 | Canola | cytosol | 0.29 | 1.01 |
Protein Annotations
| EnsemblPlants:CDX92586 | EnsemblPlantsGene:GSBRNA2T00154381001 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | ProteinID:CDX92586 |
| ProteinID:CDX92586.1 | SEG:seg | UniParc:UPI0004EE90F1 | MapMan:35.2 | : | : |
Description
BnaA10g16250D
Coordinates
chrLK031872:-:1393600..1394860
Molecular Weight (calculated)
39244.5 Da
IEP (calculated)
5.614
GRAVY (calculated)
-0.685
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTNLDGAP ELAAHHNQTF SSATNTGEKR KREGLASGER GTGYSSETEE VIIVGDTKAI KDFGFGGGEQ SQSNMSLKGS LGKKEAREEP ERAKQDSTFN
101: DFDKLREEVN FAVGQTWALY DDKVDGMPRL YAQITKVPVP GFCLSVRWLE PDPDPKEEIQ GEGSSAGTFS VYPKEGETWA IFKAHITSLS SYRNHDWSAH
201: HDSHSKYNYA FVEILSKDDD YPRVPIGFLH KAKGFSGVFC RFNKEVDKSY IKRGFTEQFS HRVPSFKTTG IEAEGVPRRG AYELDPAALP ENIKEIDVPL
301: HLLDESSPTV SNHEEEDSTH SQCVYFASKG ITFQTGQVWL LSRIRWLNCI
101: DFDKLREEVN FAVGQTWALY DDKVDGMPRL YAQITKVPVP GFCLSVRWLE PDPDPKEEIQ GEGSSAGTFS VYPKEGETWA IFKAHITSLS SYRNHDWSAH
201: HDSHSKYNYA FVEILSKDDD YPRVPIGFLH KAKGFSGVFC RFNKEVDKSY IKRGFTEQFS HRVPSFKTTG IEAEGVPRRG AYELDPAALP ENIKEIDVPL
301: HLLDESSPTV SNHEEEDSTH SQCVYFASKG ITFQTGQVWL LSRIRWLNCI
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.