Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29872 | Canola | cytosol | 72.13 | 76.01 |
| AT4G27980.2 | Thale cress | cytosol | 63.62 | 49.59 |
| PGSC0003DMT400057888 | Potato | cytosol | 14.47 | 34.34 |
| CDY41935 | Canola | cytosol | 31.7 | 28.01 |
| CDX74108 | Canola | cytosol | 11.7 | 27.23 |
| CDY27796 | Canola | cytosol | 30.43 | 27.03 |
| PGSC0003DMT400089411 | Potato | cytosol | 12.77 | 26.79 |
| CDX88917 | Canola | nucleus | 15.96 | 22.59 |
| CDY27811 | Canola | nucleus | 22.77 | 22.34 |
| CDX92586 | Canola | nucleus | 13.62 | 18.29 |
| Solyc10g007630.1.1 | Tomato | cytosol | 18.72 | 18.11 |
| PGSC0003DMT400054841 | Potato | cytosol | 18.51 | 17.61 |
| PGSC0003DMT400057893 | Potato | cytosol | 17.45 | 16.94 |
| Solyc01g098330.1.1 | Tomato | nucleus | 14.47 | 16.59 |
| PGSC0003DMT400057894 | Potato | cytosol | 13.4 | 16.24 |
| Solyc01g098310.1.1 | Tomato | cytosol | 15.32 | 15.79 |
| CDY41917 | Canola | nucleus | 31.91 | 15.69 |
| CDX86172 | Canola | nucleus | 20.85 | 15.58 |
| CDX80667 | Canola | nucleus | 21.49 | 15.19 |
| CDX70843 | Canola | extracellular, golgi | 17.23 | 14.97 |
| CDY13918 | Canola | nucleus | 18.09 | 14.83 |
| CDX70837 | Canola | mitochondrion | 15.74 | 14.68 |
| CDX88918 | Canola | cytosol | 16.6 | 14.66 |
| KRG92798 | Soybean | cytosol | 21.91 | 14.53 |
| Solyc08g029220.1.1 | Tomato | nucleus | 24.26 | 14.45 |
| PGSC0003DMT400038431 | Potato | nucleus | 24.04 | 14.36 |
| CDX74632 | Canola | cytosol | 17.66 | 14.14 |
| CDY24701 | Canola | nucleus | 17.66 | 14.09 |
| CDY47298 | Canola | cytosol | 17.45 | 14.04 |
| CDY08056 | Canola | nucleus | 18.72 | 14.01 |
| GSMUA_Achr11P... | Banana | nucleus | 19.15 | 13.76 |
| CDY05255 | Canola | nucleus | 19.15 | 13.6 |
| CDX88920 | Canola | nucleus | 16.81 | 13.44 |
| CDY13919 | Canola | nucleus | 13.19 | 13.14 |
| CDY51818 | Canola | nucleus | 11.06 | 13.13 |
| CDY40464 | Canola | nucleus | 13.4 | 13.12 |
| CDY32121 | Canola | nucleus | 12.98 | 13.12 |
| CDX70840 | Canola | nucleus | 16.17 | 13.01 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 21.28 | 12.92 |
| CDY49460 | Canola | nucleus | 17.87 | 12.88 |
| CDY35353 | Canola | cytosol | 17.02 | 12.84 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 19.79 | 12.79 |
| CDX76994 | Canola | nucleus | 15.74 | 12.71 |
| CDX92582 | Canola | nucleus | 22.77 | 12.71 |
| Os11t0574200-00 | Rice | cytosol | 8.72 | 12.54 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 17.02 | 12.44 |
| CDY19683 | Canola | cytosol | 18.09 | 12.27 |
| CDX76752 | Canola | nucleus | 15.96 | 12.12 |
| CDY11521 | Canola | nucleus | 15.11 | 11.99 |
| CDY60893 | Canola | cytosol | 4.04 | 11.95 |
| CDY60894 | Canola | cytosol | 4.04 | 11.95 |
| CDX88924 | Canola | plastid | 17.87 | 11.88 |
| Zm00001d040846_P001 | Maize | cytosol | 22.98 | 11.54 |
| Solyc01g098250.2.1 | Tomato | nucleus | 24.04 | 11.38 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 10.0 | 11.27 |
| CDY15046 | Canola | nucleus | 16.38 | 11.16 |
| CDX99992 | Canola | cytosol | 22.34 | 11.16 |
| CDX93081 | Canola | nucleus | 16.38 | 11.11 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 15.74 | 11.04 |
| CDY19714 | Canola | nucleus | 22.55 | 11.02 |
| Os01t0375100-01 | Rice | nucleus | 23.62 | 11.01 |
| PGSC0003DMT400057887 | Potato | cytosol | 19.57 | 10.93 |
| EES08665 | Sorghum | nucleus | 15.74 | 10.9 |
| EES00793 | Sorghum | cytosol | 22.55 | 10.85 |
| CDY27809 | Canola | nucleus | 22.77 | 10.79 |
| Solyc01g098340.2.1 | Tomato | cytosol | 18.3 | 10.75 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 20.21 | 10.6 |
| EER88793 | Sorghum | cytosol | 21.28 | 10.55 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 17.66 | 10.31 |
| PGSC0003DMT400057904 | Potato | nucleus | 23.62 | 10.27 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 22.55 | 10.25 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 18.94 | 10.23 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 21.91 | 10.06 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 21.7 | 9.97 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 21.91 | 9.96 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 18.3 | 9.95 |
| KRH68628 | Soybean | cytosol | 22.55 | 9.93 |
| KRG96896 | Soybean | cytosol | 22.34 | 9.92 |
| Zm00001d008412_P001 | Maize | cytosol | 21.49 | 9.91 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 20.43 | 9.84 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 19.79 | 9.8 |
| CDY31307 | Canola | cytosol | 1.91 | 9.78 |
| Os11t0578100-00 | Rice | cytosol | 21.91 | 9.78 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 18.09 | 9.78 |
| CDY34931 | Canola | cytosol | 4.68 | 9.78 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 22.77 | 9.75 |
| CDX74082 | Canola | cytosol | 4.68 | 9.73 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 20.21 | 9.73 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 20.21 | 9.73 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 17.87 | 9.73 |
| Os06t0535300-01 | Rice | nucleus | 21.06 | 9.72 |
| Zm00001d008413_P001 | Maize | cytosol | 21.06 | 9.72 |
| KXG32106 | Sorghum | cytosol | 20.85 | 9.69 |
| Os11t0573800-00 | Rice | nucleus | 18.72 | 9.59 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 21.06 | 9.57 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 22.34 | 9.55 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 19.79 | 9.54 |
| Zm00001d052947_P001 | Maize | plastid | 17.45 | 9.48 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 18.3 | 9.36 |
| CDY41919 | Canola | nucleus, plastid | 23.4 | 9.24 |
| KXG28768 | Sorghum | nucleus | 18.94 | 9.13 |
| EES09993 | Sorghum | nucleus | 21.28 | 9.07 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 21.7 | 9.02 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 16.38 | 9.02 |
| EER98396 | Sorghum | nucleus | 21.7 | 8.94 |
| OQU83710 | Sorghum | cytosol | 18.51 | 8.93 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 17.45 | 8.92 |
| Zm00001d019461_P002 | Maize | cytosol | 21.06 | 8.87 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 21.06 | 8.31 |
| CDX76475 | Canola | cytosol | 3.62 | 8.25 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 18.51 | 8.24 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 20.85 | 8.22 |
| CDX99361 | Canola | cytosol | 2.55 | 8.22 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 20.64 | 8.1 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 2.98 | 8.05 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 20.21 | 7.98 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 3.62 | 7.73 |
| OQU83709 | Sorghum | cytosol | 18.94 | 7.66 |
| CDX74107 | Canola | cytosol | 4.26 | 7.46 |
| CDX99362 | Canola | nucleus | 4.47 | 7.37 |
| CDY09330 | Canola | cytosol | 3.4 | 7.11 |
| KRH34004 | Soybean | cytosol | 4.68 | 6.92 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 7.87 | 6.85 |
| CDY27107 | Canola | nucleus | 5.32 | 6.83 |
| CDY12569 | Canola | cytosol | 5.11 | 6.7 |
| CDX76473 | Canola | cytosol | 3.4 | 6.61 |
| CDY12382 | Canola | nucleus | 4.89 | 6.28 |
| CDX76474 | Canola | cytosol | 3.19 | 6.25 |
| CDY60890 | Canola | cytosol | 3.19 | 6.2 |
| KRH34003 | Soybean | cytosol | 3.83 | 6.19 |
| CDX92583 | Canola | mitochondrion, plastid | 4.47 | 6.05 |
| CDX78942 | Canola | cytosol | 3.62 | 5.56 |
| CDX70841 | Canola | nucleus | 17.02 | 5.53 |
| CDX99360 | Canola | cytosol | 3.83 | 5.41 |
| CDX88919 | Canola | cytosol | 17.87 | 5.31 |
| CDX78941 | Canola | nucleus | 6.17 | 5.25 |
| CDX76476 | Canola | cytosol | 1.06 | 4.9 |
| CDY08035 | Canola | cytosol | 0.43 | 2.02 |
| CDX92584 | Canola | mitochondrion | 0.64 | 0.86 |
Protein Annotations
| EnsemblPlants:CDX92856 | EnsemblPlantsGene:GSBRNA2T00154692001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 |
| PFAM:PF11926 | ProteinID:CDX92856 | ProteinID:CDX92856.1 | UniParc:UPI0004EEA0DB | MapMan:35.2 | : |
Description
BnaC07g41140D
Coordinates
chrLK031873:+:1144599..1146132
Molecular Weight (calculated)
53578.6 Da
IEP (calculated)
4.978
GRAVY (calculated)
-0.594
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMEKDSDFT DLNKEILKTL EQIEEKASSF LNLSPRFNHM VESLNKKEER LRVVEAREKE VALLEETVSE KSRVLEEKEM DFDLIQLLEA SLLRLVIERQ
101: TEVAVRKKLE DVTSECERKK VEAKLVFESI HEKLCGLEKA EKDFDVKQRV EMVRLSSLEE AIKVIYAELK RKEESSAETR KRSNHEVEHD NDAGSLTPPA
201: KKHKSEEADS ACASKDGDIG GIACKDPKPL TCPDTKFNDV GMSMSSFAVD QVWALHDPRD DMPRIYAQIR SIFSSQLSLQ VTLLEHVKAT KNEKSLLSSA
301: CGRFGHGDTE IRSHLMFAHE MDHTKCDKSV IVNPRKGETW ALFKDWDISW KSQSDLHEPP YRYDLVEVIT EFDDQLGISV AYMGRVEGFE PVLNRVEQHG
401: LIKFICPGEM QRFSHKVPAG SFKLDPAATP GNDPVLEEEV ETRIQSKECG KAPTVETQEW STKDQPIILE
101: TEVAVRKKLE DVTSECERKK VEAKLVFESI HEKLCGLEKA EKDFDVKQRV EMVRLSSLEE AIKVIYAELK RKEESSAETR KRSNHEVEHD NDAGSLTPPA
201: KKHKSEEADS ACASKDGDIG GIACKDPKPL TCPDTKFNDV GMSMSSFAVD QVWALHDPRD DMPRIYAQIR SIFSSQLSLQ VTLLEHVKAT KNEKSLLSSA
301: CGRFGHGDTE IRSHLMFAHE MDHTKCDKSV IVNPRKGETW ALFKDWDISW KSQSDLHEPP YRYDLVEVIT EFDDQLGISV AYMGRVEGFE PVLNRVEQHG
401: LIKFICPGEM QRFSHKVPAG SFKLDPAATP GNDPVLEEEV ETRIQSKECG KAPTVETQEW STKDQPIILE
001: MAMQGDSVES DVTEQNSEGY LKILDKIQAK SSSIFEFSLQ FDDVVASLEK KEERLRVVEM KEKEIGLLEE SISRRLSVLE EKEIETDLRL VIEASIMRLV
101: LEKQSEDLVT QLKTEENKLG LFLRSTTKKL EELVSEFDGR KEEACRVSEK LCELEKAEKE FHLKQRAETE RRNEESEARE KDLRALEEAV KEKTAELKRK
201: EETLELKMKE EAEKLREETE LMRKGLEIKE KTLEKRLKEL ELKQMELEET SRPQLVEAES RKRSNLEIEP PLLVKNDSDA DSCTPQAKKQ KSQEANDGDI
301: EGIVCTDKSY EDPNSLTCPD TKLNDFSKSM SSFAVDQVWA LYDPRDDMPR NYAQIREIFE SQLSLQVTLL EHVKTTKDEQ SILSGCGRFE YGDTEIKSHL
401: MFAHEMDHIK SAEEVIVNPR KGETWALFSD WNASWNSHLE LQELPYRYDF VEVISEFDDL IGIQVAYMGR VEGYESVFNH AEQYGCIKIV IPPAEMQRFS
501: HKVESVKLSG KEEEGIPFRS FKLNPAAMPR YYHVLEEVVE TEIQIKDPTV VHQNGSTKDL PIIID
101: LEKQSEDLVT QLKTEENKLG LFLRSTTKKL EELVSEFDGR KEEACRVSEK LCELEKAEKE FHLKQRAETE RRNEESEARE KDLRALEEAV KEKTAELKRK
201: EETLELKMKE EAEKLREETE LMRKGLEIKE KTLEKRLKEL ELKQMELEET SRPQLVEAES RKRSNLEIEP PLLVKNDSDA DSCTPQAKKQ KSQEANDGDI
301: EGIVCTDKSY EDPNSLTCPD TKLNDFSKSM SSFAVDQVWA LYDPRDDMPR NYAQIREIFE SQLSLQVTLL EHVKTTKDEQ SILSGCGRFE YGDTEIKSHL
401: MFAHEMDHIK SAEEVIVNPR KGETWALFSD WNASWNSHLE LQELPYRYDF VEVISEFDDL IGIQVAYMGR VEGYESVFNH AEQYGCIKIV IPPAEMQRFS
501: HKVESVKLSG KEEEGIPFRS FKLNPAAMPR YYHVLEEVVE TEIQIKDPTV VHQNGSTKDL PIIID
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT4G27980]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.