Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039476.1-P | Field mustard | cytosol | 19.67 | 91.26 |
| CDY27811 | Canola | nucleus | 37.03 | 73.9 |
| AT3G04960.3 | Thale cress | cytosol | 25.63 | 40.5 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.64 | 36.87 |
| CDY29872 | Canola | cytosol | 16.63 | 35.65 |
| CDY41935 | Canola | cytosol | 18.51 | 33.27 |
| CDY27796 | Canola | cytosol | 18.41 | 33.27 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.53 | 32.14 |
| CDX92856 | Canola | nucleus | 15.69 | 31.91 |
| CDX74108 | Canola | cytosol | 6.49 | 30.69 |
| CDX88917 | Canola | nucleus | 8.58 | 24.7 |
| PGSC0003DMT400057894 | Potato | cytosol | 8.37 | 20.62 |
| CDX86172 | Canola | nucleus | 13.49 | 20.51 |
| Solyc10g007630.1.1 | Tomato | cytosol | 10.25 | 20.16 |
| CDX92586 | Canola | nucleus | 7.22 | 19.71 |
| PGSC0003DMT400054841 | Potato | cytosol | 10.15 | 19.64 |
| CDX80667 | Canola | nucleus | 13.28 | 19.1 |
| CDY24701 | Canola | nucleus | 11.61 | 18.85 |
| CDY51818 | Canola | nucleus | 7.74 | 18.69 |
| CDX76994 | Canola | nucleus | 10.88 | 17.87 |
| CDY08056 | Canola | nucleus | 11.51 | 17.52 |
| CDY35353 | Canola | cytosol | 11.19 | 17.18 |
| KRG92798 | Soybean | cytosol | 12.55 | 16.93 |
| CDY05255 | Canola | nucleus | 11.72 | 16.92 |
| CDY40464 | Canola | nucleus | 8.37 | 16.67 |
| Solyc01g098330.1.1 | Tomato | nucleus | 7.11 | 16.59 |
| CDY49460 | Canola | nucleus | 11.3 | 16.56 |
| PGSC0003DMT400057893 | Potato | cytosol | 8.37 | 16.53 |
| CDY32121 | Canola | nucleus | 7.95 | 16.34 |
| CDY19683 | Canola | cytosol | 11.82 | 16.31 |
| GSMUA_Achr11P... | Banana | nucleus | 10.77 | 15.75 |
| CDY13918 | Canola | nucleus | 9.31 | 15.53 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 10.36 | 15.4 |
| Solyc01g098310.1.1 | Tomato | cytosol | 7.32 | 15.35 |
| CDX70843 | Canola | extracellular, golgi | 8.68 | 15.34 |
| Solyc08g029220.1.1 | Tomato | nucleus | 12.66 | 15.34 |
| CDX70837 | Canola | mitochondrion | 8.05 | 15.28 |
| CDX76752 | Canola | nucleus | 9.83 | 15.19 |
| CDY11521 | Canola | nucleus | 9.31 | 15.03 |
| PGSC0003DMT400038431 | Potato | nucleus | 12.34 | 14.99 |
| CDY47298 | Canola | cytosol | 9.1 | 14.9 |
| CDX88918 | Canola | cytosol | 8.26 | 14.85 |
| CDX74632 | Canola | cytosol | 9.1 | 14.82 |
| CDX88920 | Canola | nucleus | 9.1 | 14.8 |
| CDX99992 | Canola | cytosol | 14.44 | 14.67 |
| CDX70840 | Canola | nucleus | 8.89 | 14.55 |
| CDY19714 | Canola | nucleus | 14.64 | 14.55 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 11.4 | 14.08 |
| CDY13919 | Canola | nucleus | 6.9 | 13.98 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 10.36 | 13.62 |
| CDX92582 | Canola | nucleus | 11.82 | 13.42 |
| CDY60893 | Canola | cytosol | 2.2 | 13.21 |
| CDY60894 | Canola | cytosol | 2.2 | 13.21 |
| CDX93081 | Canola | nucleus | 9.52 | 13.13 |
| CDY15046 | Canola | nucleus | 9.41 | 13.04 |
| Os11t0574200-00 | Rice | cytosol | 4.39 | 12.84 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 8.89 | 12.69 |
| CDX88924 | Canola | plastid | 9.31 | 12.59 |
| EES08665 | Sorghum | nucleus | 8.89 | 12.52 |
| CDY27809 | Canola | nucleus | 12.87 | 12.4 |
| Solyc01g098250.2.1 | Tomato | nucleus | 12.87 | 12.39 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.33 | 12.23 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 12.34 | 12.09 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 12.24 | 11.99 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 10.04 | 11.93 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 12.13 | 11.89 |
| Zm00001d008412_P001 | Maize | cytosol | 12.66 | 11.87 |
| KXG32106 | Sorghum | cytosol | 12.55 | 11.87 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 12.03 | 11.79 |
| Solyc01g098340.2.1 | Tomato | cytosol | 9.83 | 11.75 |
| Zm00001d008413_P001 | Maize | cytosol | 12.45 | 11.69 |
| Os06t0535300-01 | Rice | nucleus | 12.34 | 11.59 |
| PGSC0003DMT400057887 | Potato | cytosol | 10.15 | 11.52 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 10.36 | 11.38 |
| KRG96896 | Soybean | cytosol | 12.45 | 11.25 |
| PGSC0003DMT400057904 | Potato | nucleus | 12.66 | 11.19 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 10.15 | 11.16 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 10.46 | 11.16 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 10.04 | 11.12 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 10.04 | 11.11 |
| Zm00001d052947_P001 | Maize | plastid | 10.04 | 11.1 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 10.56 | 10.99 |
| KRH68628 | Soybean | cytosol | 12.24 | 10.97 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 10.46 | 10.88 |
| Zm00001d040846_P001 | Maize | cytosol | 10.56 | 10.79 |
| Os11t0573800-00 | Rice | nucleus | 10.15 | 10.57 |
| EER88793 | Sorghum | cytosol | 10.46 | 10.55 |
| EES00793 | Sorghum | cytosol | 10.67 | 10.44 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 10.36 | 10.43 |
| Os01t0375100-01 | Rice | nucleus | 10.98 | 10.42 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 11.09 | 10.25 |
| Os11t0578100-00 | Rice | cytosol | 11.19 | 10.16 |
| CDY41919 | Canola | nucleus, plastid | 12.66 | 10.16 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 10.98 | 10.15 |
| EES09993 | Sorghum | nucleus | 11.61 | 10.06 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 10.67 | 9.97 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 10.67 | 9.96 |
| KXG28768 | Sorghum | nucleus | 10.04 | 9.85 |
| CDY27107 | Canola | nucleus | 3.77 | 9.84 |
| EER98396 | Sorghum | nucleus | 11.72 | 9.82 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 10.56 | 9.77 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 11.09 | 9.66 |
| CDX99361 | Canola | cytosol | 1.46 | 9.59 |
| CDY12382 | Canola | nucleus | 3.66 | 9.56 |
| OQU83709 | Sorghum | cytosol | 11.61 | 9.55 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 8.47 | 9.48 |
| CDX78942 | Canola | cytosol | 3.03 | 9.48 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 10.88 | 9.46 |
| CDY34931 | Canola | cytosol | 2.2 | 9.33 |
| Zm00001d019461_P002 | Maize | cytosol | 10.88 | 9.32 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 5.23 | 9.26 |
| CDX76474 | Canola | cytosol | 2.3 | 9.17 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 2.09 | 9.09 |
| CDY60890 | Canola | cytosol | 2.3 | 9.09 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 10.67 | 9.02 |
| CDY31307 | Canola | cytosol | 0.84 | 8.7 |
| OQU83710 | Sorghum | cytosol | 8.79 | 8.62 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 10.56 | 8.47 |
| CDX99360 | Canola | cytosol | 2.93 | 8.41 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 10.46 | 8.39 |
| CDY12569 | Canola | cytosol | 3.14 | 8.38 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 10.36 | 8.32 |
| CDX74107 | Canola | cytosol | 2.3 | 8.21 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 10.25 | 8.18 |
| CDX99362 | Canola | nucleus | 2.41 | 8.07 |
| CDX74082 | Canola | cytosol | 1.88 | 7.96 |
| CDX76476 | Canola | cytosol | 0.84 | 7.84 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 8.58 | 7.77 |
| CDX76475 | Canola | cytosol | 1.57 | 7.28 |
| KRH34004 | Soybean | cytosol | 2.41 | 7.23 |
| CDY09330 | Canola | cytosol | 1.67 | 7.11 |
| KRH34003 | Soybean | cytosol | 2.09 | 6.87 |
| CDX76473 | Canola | cytosol | 1.67 | 6.61 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.15 | 6.32 |
| CDX78941 | Canola | nucleus | 3.56 | 6.16 |
| CDX70841 | Canola | nucleus | 9.0 | 5.94 |
| CDX88919 | Canola | cytosol | 9.52 | 5.76 |
| CDX92583 | Canola | mitochondrion, plastid | 1.88 | 5.19 |
| CDY08035 | Canola | cytosol | 0.52 | 5.05 |
| CDX92584 | Canola | mitochondrion | 0.63 | 1.72 |
Protein Annotations
| EnsemblPlants:CDY41917 | EnsemblPlantsGene:GSBRNA2T00073899001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 |
| PFAM:PF11926 | ProteinID:CDY41917 | ProteinID:CDY41917.1 | SEG:seg | UniParc:UPI0004EE55F9 | UniProt:A0A078HVQ9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC05g46870DBnaC05g46870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVQ9]
Coordinates
chrLK032510:+:169089..174163
Molecular Weight (calculated)
112231.0 Da
IEP (calculated)
5.270
GRAVY (calculated)
-0.908
Length
956 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPGQQDPVT LGLEHRVTMD QGSIERFMTQ VTEQALEVVD LKRQWKEYEE AYALMEETVR NHVLEAKKKE EESDMKHSLE THVMMLTLEM QTEEAVAQHE
101: ELKQEVQVKK EELEARENEL KKREEELEVK RKSLEVKEKN FEELMRLHDE TMKEESTEIE KRNQRQEAEA REIEVKRHSL ELKEKQLEER EELLKGKKKK
201: RELDKRAKSR KRSRDELAEK DDIDEDCLIR KKHKHDAKEK DPEPYSCPDA DFNSFNNNTI SSSAVGQIWA LYDPSDEMPR YYARIRKVLK PQLRVGIRWL
301: ESKAANKKPV PIACGEFKYG DKTTSSHLMF SHEMHHVRTG KKTVSINPRK GETWALFRDW KKEQQQHKRL YRYDFVQIES ELDSDHGVGV AYLGKVVGFT
401: SVYELAEQHD CFKMMIPSDE MLRFSHRVPS FVLTGDERKG VPAGSFELDP AAIPKDCLED LKVYNVCDEF SLQEMRGMSY LLSFCEGKYL LIKRKCFGAL
501: WKISSAHDHD ESEAQAEAIV KRNMGETRFL QRVTVEPVQP AGPVRWDEEL VERCLSHATE TATGMLDLSG QVREYKEMMV ESVRKQSLEM EEKEKESDLR
601: RSLEAELLML VLEMQMVEEV VEREFRVREE KHEEREKVVR KLGENVQERC NEMEKREEEF QLKAKDVEVK RKELELKEKR REEQFQLRQD SEAKEIEAKM
701: RSLERKEKEL ERKEKEFEEL SKQTKNDDEA DDDEDPEPYN CLDADFNNFN NTMSSFSVGQ VWALYDPLDH MPRLYAKIKK VLELKMKVEV TWLESKQNSS
801: TPIACGEFKY GERTIKSYLT FSHLMVDHTG KKKSIITINP RKGETWALFR DWKKQQQKRP YGYDFVQVVS ELDSGGIGVA YLGRVEGFTS VYELGEQNGV
901: LQMMVRCDEM LRFSHRVPSF VLTGDERKGV PAGSFELDPA AIPRDYLEAS EVKQEE
101: ELKQEVQVKK EELEARENEL KKREEELEVK RKSLEVKEKN FEELMRLHDE TMKEESTEIE KRNQRQEAEA REIEVKRHSL ELKEKQLEER EELLKGKKKK
201: RELDKRAKSR KRSRDELAEK DDIDEDCLIR KKHKHDAKEK DPEPYSCPDA DFNSFNNNTI SSSAVGQIWA LYDPSDEMPR YYARIRKVLK PQLRVGIRWL
301: ESKAANKKPV PIACGEFKYG DKTTSSHLMF SHEMHHVRTG KKTVSINPRK GETWALFRDW KKEQQQHKRL YRYDFVQIES ELDSDHGVGV AYLGKVVGFT
401: SVYELAEQHD CFKMMIPSDE MLRFSHRVPS FVLTGDERKG VPAGSFELDP AAIPKDCLED LKVYNVCDEF SLQEMRGMSY LLSFCEGKYL LIKRKCFGAL
501: WKISSAHDHD ESEAQAEAIV KRNMGETRFL QRVTVEPVQP AGPVRWDEEL VERCLSHATE TATGMLDLSG QVREYKEMMV ESVRKQSLEM EEKEKESDLR
601: RSLEAELLML VLEMQMVEEV VEREFRVREE KHEEREKVVR KLGENVQERC NEMEKREEEF QLKAKDVEVK RKELELKEKR REEQFQLRQD SEAKEIEAKM
701: RSLERKEKEL ERKEKEFEEL SKQTKNDDEA DDDEDPEPYN CLDADFNNFN NTMSSFSVGQ VWALYDPLDH MPRLYAKIKK VLELKMKVEV TWLESKQNSS
801: TPIACGEFKY GERTIKSYLT FSHLMVDHTG KKKSIITINP RKGETWALFR DWKKQQQKRP YGYDFVQVVS ELDSGGIGVA YLGRVEGFTS VYELGEQNGV
901: LQMMVRCDEM LRFSHRVPSF VLTGDERKGV PAGSFELDPA AIPRDYLEAS EVKQEE
001: MLSTERTKFR SMEPATSSPL PRDTSEQDPA LAQSEDQSQG RLRVSAYDLM VVDSDLEGLD QRKEEMRNIF DDIQDKASLI LQFSLKWEEI DDRFGFLKQR
101: AMEKEVSVRN QILELEKKEE RLRLVEERER KIEASFSTLQ EKGNESDLIL LMEANVMRLV LQMQFEQVVV AQLNAQENFL GSLHDSMMKK HEELMTELEA
201: RKNEVALISK TIDAKTCDLD MKVKDFDLKQ TTESERMRKE TELMETSLKQ LEARENELRL LNETIQGKSM ELEKKEVNFQ LKHEAAARET EVKNKFLELK
301: EKKLEEREQH LELKQRKKEK PAIRAETRKR SRLEYESPLS AEKGRYAETL IRPGKKQVQK REAHEIIYID EDEPFNCPDP DFHDFNNTMS SFAVGQVWAL
401: YDPVDDMPRY YAEIRKVLQP QLSLRVTWLE SLQTTEEPIP ACGRFEHGKS ETSSHLMFSH EMYHTIRGQY VTINPRKGET WALFGDWTKT WKSHSEQQKT
501: PYSYDFVEVV TEFDSDRGIG VAYLGRVEGF TSVYERAAQN GLVEIMISCD EMLRFSHRVP SFKMTGDEKE GVPAGSFELD PAAVPRVYLK DAKVKEEKME
601: PIVLV
101: AMEKEVSVRN QILELEKKEE RLRLVEERER KIEASFSTLQ EKGNESDLIL LMEANVMRLV LQMQFEQVVV AQLNAQENFL GSLHDSMMKK HEELMTELEA
201: RKNEVALISK TIDAKTCDLD MKVKDFDLKQ TTESERMRKE TELMETSLKQ LEARENELRL LNETIQGKSM ELEKKEVNFQ LKHEAAARET EVKNKFLELK
301: EKKLEEREQH LELKQRKKEK PAIRAETRKR SRLEYESPLS AEKGRYAETL IRPGKKQVQK REAHEIIYID EDEPFNCPDP DFHDFNNTMS SFAVGQVWAL
401: YDPVDDMPRY YAEIRKVLQP QLSLRVTWLE SLQTTEEPIP ACGRFEHGKS ETSSHLMFSH EMYHTIRGQY VTINPRKGET WALFGDWTKT WKSHSEQQKT
501: PYSYDFVEVV TEFDSDRGIG VAYLGRVEGF TSVYERAAQN GLVEIMISCD EMLRFSHRVP SFKMTGDEKE GVPAGSFELD PAAVPRVYLK DAKVKEEKME
601: PIVLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.