Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013179.1-P | Field mustard | nucleus | 97.83 | 97.4 |
| CDX93081 | Canola | nucleus | 97.83 | 97.4 |
| AT2G05230.1 | Thale cress | cytosol | 84.2 | 82.29 |
| AT2G05250.1 | Thale cress | cytosol | 84.2 | 82.29 |
| CDY47298 | Canola | cytosol | 57.68 | 68.15 |
| CDX74632 | Canola | cytosol | 57.83 | 67.97 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 50.87 | 50.58 |
| KRH73997 | Soybean | nucleus | 51.01 | 49.93 |
| KRH14137 | Soybean | nucleus | 50.72 | 49.51 |
| CDX76476 | Canola | cytosol | 6.38 | 43.14 |
| Solyc07g047690.1.1 | Tomato | nucleus | 48.41 | 42.39 |
| Solyc05g040050.1.1 | Tomato | nucleus | 47.39 | 41.76 |
| CDY31307 | Canola | cytosol | 5.22 | 39.13 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 9.71 | 38.51 |
| CDX99361 | Canola | cytosol | 7.83 | 36.99 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 31.45 | 36.05 |
| CDX76475 | Canola | cytosol | 10.58 | 35.44 |
| CDX76994 | Canola | nucleus | 29.42 | 34.88 |
| CDY35353 | Canola | cytosol | 30.72 | 34.03 |
| CDY60893 | Canola | cytosol | 7.54 | 32.7 |
| CDY60894 | Canola | cytosol | 7.54 | 32.7 |
| CDY11521 | Canola | nucleus | 27.97 | 32.6 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 34.64 | 32.21 |
| CDX76474 | Canola | cytosol | 11.16 | 32.08 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 24.93 | 31.97 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 34.35 | 31.94 |
| Zm00001d003948_P001 | Maize | cytosol | 34.06 | 31.93 |
| CDY49460 | Canola | nucleus | 30.14 | 31.9 |
| Os02t0510000-01 | Rice | cytosol | 33.91 | 31.88 |
| CDX76752 | Canola | nucleus | 28.55 | 31.83 |
| PGSC0003DMT400092645 | Potato | cytosol | 5.94 | 31.78 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 34.35 | 31.77 |
| EES10633 | Sorghum | cytosol | 33.77 | 31.7 |
| OQU85000 | Sorghum | cytosol | 33.33 | 31.59 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 33.48 | 31.51 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 33.48 | 31.51 |
| GSMUA_Achr11P... | Banana | cytosol | 22.75 | 31.27 |
| Zm00001d025238_P001 | Maize | cytosol | 33.19 | 31.2 |
| CDY19683 | Canola | cytosol | 31.3 | 31.17 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 23.62 | 31.17 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 31.88 | 31.16 |
| CDY09330 | Canola | cytosol | 10.14 | 31.11 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 26.09 | 31.03 |
| CDY60890 | Canola | cytosol | 10.87 | 30.99 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 19.57 | 30.68 |
| CDX76473 | Canola | cytosol | 10.72 | 30.58 |
| CDX99362 | Canola | nucleus | 12.61 | 30.53 |
| GSMUA_Achr10P... | Banana | cytosol | 27.1 | 30.51 |
| EES10933 | Sorghum | cytosol | 31.88 | 30.39 |
| EES07899 | Sorghum | cytosol | 32.17 | 30.2 |
| Zm00001d025584_P001 | Maize | cytosol | 31.88 | 30.01 |
| Zm00001d025585_P001 | Maize | cytosol | 31.88 | 30.01 |
| Os03t0401200-01 | Rice | cytosol | 32.46 | 29.95 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 32.9 | 29.83 |
| CDY27107 | Canola | nucleus | 15.65 | 29.51 |
| Zm00001d050565_P001 | Maize | cytosol | 27.39 | 29.35 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 32.17 | 29.17 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.28 | 29.09 |
| CDX78942 | Canola | cytosol | 12.75 | 28.76 |
| CDY12382 | Canola | nucleus | 15.07 | 28.42 |
| CDX74108 | Canola | cytosol | 8.26 | 28.22 |
| CDY12569 | Canola | cytosol | 14.64 | 28.21 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 28.84 | 27.95 |
| Os04t0388800-01 | Rice | nucleus | 24.2 | 27.93 |
| CDY08035 | Canola | cytosol | 3.91 | 27.27 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 28.26 | 26.86 |
| CDY32121 | Canola | nucleus | 17.68 | 26.24 |
| Os01t0923800-01 | Rice | nucleus | 28.12 | 26.08 |
| CDY40464 | Canola | nucleus | 18.12 | 26.04 |
| CDX74107 | Canola | cytosol | 10.0 | 25.75 |
| CDX99360 | Canola | cytosol | 12.17 | 25.23 |
| CDX88917 | Canola | nucleus | 12.03 | 25.0 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 28.41 | 24.78 |
| KXG34016 | Sorghum | nucleus | 29.28 | 24.37 |
| Zm00001d011997_P001 | Maize | nucleus | 28.99 | 24.33 |
| CDY24701 | Canola | nucleus | 20.43 | 23.94 |
| CDY08056 | Canola | nucleus | 21.59 | 23.73 |
| CDY34931 | Canola | cytosol | 7.68 | 23.56 |
| CDX74082 | Canola | cytosol | 7.54 | 23.01 |
| CDY05255 | Canola | nucleus | 22.03 | 22.96 |
| CDY13919 | Canola | nucleus | 15.07 | 22.03 |
| CDX92586 | Canola | nucleus | 10.58 | 20.86 |
| CDX86172 | Canola | nucleus | 18.99 | 20.83 |
| CDY41935 | Canola | cytosol | 15.8 | 20.49 |
| CDY27796 | Canola | cytosol | 15.65 | 20.42 |
| CDX80667 | Canola | nucleus | 19.13 | 19.85 |
| CDY51818 | Canola | nucleus | 11.3 | 19.7 |
| CDX78941 | Canola | nucleus | 15.36 | 19.2 |
| CDX92582 | Canola | nucleus | 21.16 | 17.34 |
| CDX99992 | Canola | cytosol | 22.61 | 16.58 |
| CDX92856 | Canola | nucleus | 11.16 | 16.38 |
| CDY27811 | Canola | nucleus | 11.01 | 15.87 |
| CDY13918 | Canola | nucleus | 13.04 | 15.71 |
| CDY19714 | Canola | nucleus | 21.74 | 15.59 |
| CDX70837 | Canola | mitochondrion | 11.3 | 15.48 |
| CDX70843 | Canola | extracellular, golgi | 11.88 | 15.16 |
| CDX88918 | Canola | cytosol | 11.59 | 15.04 |
| CDY29872 | Canola | cytosol | 9.71 | 15.02 |
| CDY27809 | Canola | nucleus | 21.3 | 14.82 |
| CDX70840 | Canola | nucleus | 11.3 | 13.36 |
| CDX88924 | Canola | plastid | 13.04 | 12.73 |
| CDX88920 | Canola | nucleus | 10.72 | 12.59 |
| CDY41919 | Canola | nucleus, plastid | 21.3 | 12.34 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 7.1 | 11.75 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 13.04 | 10.54 |
| CDY41917 | Canola | nucleus | 13.04 | 9.41 |
| CDX70841 | Canola | nucleus | 13.48 | 6.43 |
| CDX88919 | Canola | cytosol | 14.35 | 6.26 |
| CDX92583 | Canola | mitochondrion, plastid | 2.46 | 4.9 |
| CDX92584 | Canola | mitochondrion | 0.58 | 1.15 |
Protein Annotations
| EnsemblPlants:CDY15046 | EnsemblPlantsGene:GSBRNA2T00085151001 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF2 | PFAM:PF00226 | PFAM:PF11926 |
| PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDY15046 | ProteinID:CDY15046.1 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EE456C | UniProt:A0A078FPP4 | MapMan:35.2 | : | : |
Description
BnaC03g44070DBnaC03g44070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPP4]
Coordinates
chrLK032051:+:5661..8318
Molecular Weight (calculated)
77527.4 Da
IEP (calculated)
9.000
GRAVY (calculated)
-0.557
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAYREEALR VKQVAERRFA EKDFASARSY ALKARSLSPD LEGLAQMIAT FEVYLASQCR SGGGQIDYYA VLGLKPSAGK RDVKKQYKKM AVLLHPDKNK
101: CIGADGAFHL VSEAWKFLSN EFNKSTFYYK RKKHIESSTV VQKHRAEYTP GTAAFDRFPP SSSSERLDTF WTVCTSCKVQ YEYLRKYVNK RLSCKNCRGA
201: FIAVETGPAP VSAPFHYTHP SHAPPPLHSN GYSSHSYDAR MPTNSTYLLG HHYPAQGHGY EYGSYDWSSS YPETTSPGNL DLKRVSSVSN GYPYKHSKSV
301: ASMGIINKVK DGSNGTSSVK TKPDGLIYAN PPDLSTHTAA VKVGRPEKKS RVFIEASVNG FVENPLMRSA PVSKTTNADF KLHGQSYGST RRWSTAPVLD
401: TRKPLLQKAR ADIKQRLDSI RLASEAAAAA AAVEEDTTPV DSCKLGDVTA GRKTSGPITV PDSDFHDFDK NRSEECFEPR QIWAIYDEDD GMPRLYCVVR
501: EVLSLEPFKI DIAYLSSKTD IEFGSMKWVQ YGFTKSCGHF RIQNYDVVEQ VNIFSHLLRG RKTGRGGCVR IFPKTGDIWA VYKNWSLNWN KSTPDELRHE
601: YEMVEILDEY TEQYGVCIAP LVKLEGYKTV YHRSAREDGK KWIPRSEMLR FSHQVPSWFL KGATSGFPGN CWDLDPAAIP EELLHVGAEA
101: CIGADGAFHL VSEAWKFLSN EFNKSTFYYK RKKHIESSTV VQKHRAEYTP GTAAFDRFPP SSSSERLDTF WTVCTSCKVQ YEYLRKYVNK RLSCKNCRGA
201: FIAVETGPAP VSAPFHYTHP SHAPPPLHSN GYSSHSYDAR MPTNSTYLLG HHYPAQGHGY EYGSYDWSSS YPETTSPGNL DLKRVSSVSN GYPYKHSKSV
301: ASMGIINKVK DGSNGTSSVK TKPDGLIYAN PPDLSTHTAA VKVGRPEKKS RVFIEASVNG FVENPLMRSA PVSKTTNADF KLHGQSYGST RRWSTAPVLD
401: TRKPLLQKAR ADIKQRLDSI RLASEAAAAA AAVEEDTTPV DSCKLGDVTA GRKTSGPITV PDSDFHDFDK NRSEECFEPR QIWAIYDEDD GMPRLYCVVR
501: EVLSLEPFKI DIAYLSSKTD IEFGSMKWVQ YGFTKSCGHF RIQNYDVVEQ VNIFSHLLRG RKTGRGGCVR IFPKTGDIWA VYKNWSLNWN KSTPDELRHE
601: YEMVEILDEY TEQYGVCIAP LVKLEGYKTV YHRSAREDGK KWIPRSEMLR FSHQVPSWFL KGATSGFPGN CWDLDPAAIP EELLHVGAEA
001: MEAYREEALR VKQIAERRFA EKDFTSARSY ALKAKSLFPD LEGLSQMVAT FEVYLASQTR SGGQIDYYAV LGLKPSAGKR EVKKQYKKMA VLLHPDKNKC
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN
Arabidopsis Description
At2g05250/F5G3.15 [Source:UniProtKB/TrEMBL;Acc:Q9S7L6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.