Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35353 | Canola | cytosol | 92.44 | 86.36 |
| AT2G25560.1 | Thale cress | cytosol | 71.82 | 63.72 |
| CDX76752 | Canola | nucleus | 55.15 | 51.86 |
| CDY11521 | Canola | nucleus | 50.69 | 49.83 |
| CDX76476 | Canola | cytosol | 6.87 | 39.22 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 37.8 | 36.54 |
| GSMUA_Achr11P... | Banana | cytosol | 30.41 | 35.26 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 31.96 | 34.57 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 10.31 | 34.48 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 30.58 | 34.03 |
| CDX76475 | Canola | cytosol | 12.03 | 33.98 |
| GSMUA_Achr10P... | Banana | cytosol | 34.19 | 32.46 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 24.4 | 32.27 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 40.55 | 32.2 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 40.55 | 32.2 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 38.49 | 31.73 |
| EES10633 | Sorghum | cytosol | 39.86 | 31.56 |
| CDX76474 | Canola | cytosol | 12.89 | 31.25 |
| Os02t0510000-01 | Rice | cytosol | 39.18 | 31.06 |
| Zm00001d025238_P001 | Maize | cytosol | 39.0 | 30.93 |
| Zm00001d003948_P001 | Maize | cytosol | 39.0 | 30.84 |
| CDX99361 | Canola | cytosol | 7.73 | 30.82 |
| OQU85000 | Sorghum | cytosol | 38.49 | 30.77 |
| Os04t0388800-01 | Rice | nucleus | 31.1 | 30.27 |
| CDY19683 | Canola | cytosol | 35.57 | 29.87 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 29.73 | 29.83 |
| CDX74108 | Canola | cytosol | 10.31 | 29.7 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 37.8 | 29.65 |
| CDX74632 | Canola | cytosol | 29.73 | 29.47 |
| CDY49460 | Canola | nucleus | 32.99 | 29.45 |
| CDY15046 | Canola | nucleus | 34.88 | 29.42 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 37.46 | 29.38 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 37.63 | 29.36 |
| CDX93081 | Canola | nucleus | 34.88 | 29.29 |
| CDY47298 | Canola | cytosol | 29.38 | 29.28 |
| Os03t0401200-01 | Rice | cytosol | 37.63 | 29.28 |
| CDY60890 | Canola | cytosol | 12.03 | 28.93 |
| Zm00001d050565_P001 | Maize | cytosol | 31.96 | 28.88 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 37.63 | 28.78 |
| EES07899 | Sorghum | cytosol | 36.25 | 28.71 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 37.46 | 28.65 |
| CDY09330 | Canola | cytosol | 10.82 | 28.0 |
| Zm00001d025584_P001 | Maize | cytosol | 35.22 | 27.97 |
| Zm00001d025585_P001 | Maize | cytosol | 34.88 | 27.69 |
| CDX76473 | Canola | cytosol | 11.51 | 27.69 |
| CDY60893 | Canola | cytosol | 7.56 | 27.67 |
| CDY60894 | Canola | cytosol | 7.56 | 27.67 |
| EES10933 | Sorghum | cytosol | 34.19 | 27.49 |
| CDX99362 | Canola | nucleus | 13.4 | 27.37 |
| CDY08035 | Canola | cytosol | 4.64 | 27.27 |
| CDY31307 | Canola | cytosol | 4.3 | 27.17 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 33.51 | 26.86 |
| Os01t0923800-01 | Rice | nucleus | 34.19 | 26.75 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 32.65 | 26.69 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.97 | 26.36 |
| CDY27107 | Canola | nucleus | 16.49 | 26.23 |
| CDX88917 | Canola | nucleus | 14.95 | 26.2 |
| CDY12382 | Canola | nucleus | 16.32 | 25.96 |
| CDX78942 | Canola | cytosol | 13.4 | 25.49 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 34.19 | 25.16 |
| CDX74107 | Canola | cytosol | 11.51 | 25.0 |
| CDY12569 | Canola | cytosol | 15.29 | 24.86 |
| CDX99360 | Canola | cytosol | 13.4 | 23.42 |
| Zm00001d011997_P001 | Maize | nucleus | 32.99 | 23.36 |
| KXG34016 | Sorghum | nucleus | 33.16 | 23.28 |
| CDY08056 | Canola | nucleus | 24.57 | 22.77 |
| CDY40464 | Canola | nucleus | 18.73 | 22.71 |
| CDY24701 | Canola | nucleus | 22.85 | 22.58 |
| CDX86172 | Canola | nucleus | 23.54 | 21.78 |
| CDY05255 | Canola | nucleus | 24.74 | 21.75 |
| CDY32121 | Canola | nucleus | 17.18 | 21.51 |
| CDX80667 | Canola | nucleus | 23.2 | 20.3 |
| CDX92586 | Canola | nucleus | 11.86 | 19.71 |
| CDY27796 | Canola | cytosol | 17.53 | 19.28 |
| CDY41935 | Canola | cytosol | 17.53 | 19.17 |
| CDY51818 | Canola | nucleus | 12.71 | 18.69 |
| CDX74082 | Canola | cytosol | 7.22 | 18.58 |
| CDY13919 | Canola | nucleus | 14.95 | 18.43 |
| CDY34931 | Canola | cytosol | 7.04 | 18.22 |
| CDX78941 | Canola | nucleus | 16.49 | 17.39 |
| CDY27811 | Canola | nucleus | 14.26 | 17.33 |
| CDX92582 | Canola | nucleus | 24.57 | 16.98 |
| CDY29872 | Canola | cytosol | 12.89 | 16.82 |
| CDX99992 | Canola | cytosol | 26.8 | 16.58 |
| CDY19714 | Canola | nucleus | 27.15 | 16.42 |
| CDY13918 | Canola | nucleus | 16.15 | 16.4 |
| CDX70843 | Canola | extracellular, golgi | 14.95 | 16.08 |
| CDX88918 | Canola | cytosol | 14.43 | 15.79 |
| CDX92856 | Canola | nucleus | 12.71 | 15.74 |
| CDX70837 | Canola | mitochondrion | 13.57 | 15.67 |
| CDY27809 | Canola | nucleus | 26.12 | 15.32 |
| CDX88924 | Canola | plastid | 17.01 | 14.0 |
| CDX70840 | Canola | nucleus | 13.92 | 13.87 |
| CDX88920 | Canola | nucleus | 13.92 | 13.78 |
| CDY41919 | Canola | nucleus, plastid | 25.95 | 12.68 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 8.76 | 12.23 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 16.15 | 11.01 |
| CDY41917 | Canola | nucleus | 17.87 | 10.88 |
| CDX70841 | Canola | nucleus | 16.84 | 6.77 |
| CDX88919 | Canola | cytosol | 17.35 | 6.39 |
| CDX92583 | Canola | mitochondrion, plastid | 3.44 | 5.76 |
| CDX92584 | Canola | mitochondrion | 1.2 | 2.01 |
Protein Annotations
| EnsemblPlants:CDX76994 | EnsemblPlantsGene:GSBRNA2T00127549001 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | PFAM:PF00226 | PFAM:PF11926 |
| PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDX76994 | ProteinID:CDX76994.1 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EEFD16 | MapMan:35.2 | : | : | : |
Description
BnaC04g37890D
Coordinates
chrLK031809:+:249751..252222
Molecular Weight (calculated)
64862.0 Da
IEP (calculated)
8.555
GRAVY (calculated)
-0.611
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNKEEANR ARETAKKKFL SNDFPGARKF ALKAQFLNPD LEGISRMVAT FDVHVCAQNV IHGEIDYYGV LGINPEADDE TVRKRYRKLA VTLHPDRNKG
101: AAAAAAAAAS SSKHADNGVT KRASDASASA ATPVSTSDGT FWTVCRTCRT QYEYHRVYLN QNLLCPNCRK PFIAVETDPP GSGSIRKTFH EHQFESIRQS
201: TDGRKRSRDN NNNGVYGGEY DSFEWTATKT SAHGAQTGSR KDEAVRREYT RRVAGGATST NAPKRRKGMD NAVAGGSNVA ATCFAPKSNS VREFSDDELK
301: NLLKKKAKPI ISRKLQELAE TDAHKSAIES FCLDSIEDTS GSADKDLDPL EVTDPDFCDF NKDRTEKSFR DSQIWACYDS LDGMPRGYVV IDKVISVDPF
401: KVCIVQLTSE TSSELRSTKW LGFGVQKACG NFRAGKKTQI CRSAYVFSHK VEQVKGNHHG EFLIYPRRGD VWAMYRNWSH EWNYLTGGKA IEYDVVEVVE
501: GYREEYGVSV VPLMKVAGFK SVFHHHLDLK DVRRISSDEI SRFSHRIPSY LLTGREAPGA PRGCIQLDPA ATPSQLLQVI DM
101: AAAAAAAAAS SSKHADNGVT KRASDASASA ATPVSTSDGT FWTVCRTCRT QYEYHRVYLN QNLLCPNCRK PFIAVETDPP GSGSIRKTFH EHQFESIRQS
201: TDGRKRSRDN NNNGVYGGEY DSFEWTATKT SAHGAQTGSR KDEAVRREYT RRVAGGATST NAPKRRKGMD NAVAGGSNVA ATCFAPKSNS VREFSDDELK
301: NLLKKKAKPI ISRKLQELAE TDAHKSAIES FCLDSIEDTS GSADKDLDPL EVTDPDFCDF NKDRTEKSFR DSQIWACYDS LDGMPRGYVV IDKVISVDPF
401: KVCIVQLTSE TSSELRSTKW LGFGVQKACG NFRAGKKTQI CRSAYVFSHK VEQVKGNHHG EFLIYPRRGD VWAMYRNWSH EWNYLTGGKA IEYDVVEVVE
501: GYREEYGVSV VPLMKVAGFK SVFHHHLDLK DVRRISSDEI SRFSHRIPSY LLTGREAPGA PRGCIQLDPA ATPSQLLQVI DM
001: MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI IYGDVDHYGV LGLNPEADDE IVRKRYRKLA VMLHPDRNKS
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
Arabidopsis Description
At2g25560/F13B15.22 [Source:UniProtKB/TrEMBL;Acc:Q9SLA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.