Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006479.1-P | Field mustard | cytosol | 93.37 | 56.16 |
| CDX70843 | Canola | extracellular, golgi | 80.72 | 49.54 |
| PGSC0003DMT400057888 | Potato | cytosol | 27.71 | 46.46 |
| CDX88918 | Canola | cytosol | 74.1 | 46.24 |
| CDX74108 | Canola | cytosol | 23.8 | 39.11 |
| CDX70837 | Canola | mitochondrion | 57.23 | 37.7 |
| PGSC0003DMT400089411 | Potato | cytosol | 25.3 | 37.5 |
| CDX92586 | Canola | nucleus | 38.86 | 36.86 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 88.25 | 34.31 |
| CDY13918 | Canola | nucleus | 58.73 | 34.03 |
| CDX88924 | Canola | plastid | 62.05 | 29.14 |
| CDX88920 | Canola | nucleus | 44.88 | 25.34 |
| CDX70840 | Canola | nucleus | 44.28 | 25.17 |
| PGSC0003DMT400057894 | Potato | cytosol | 27.71 | 23.71 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 27.41 | 21.82 |
| Solyc01g098330.1.1 | Tomato | nucleus | 25.3 | 20.49 |
| PGSC0003DMT400057893 | Potato | cytosol | 29.52 | 20.25 |
| Solyc10g007630.1.1 | Tomato | cytosol | 29.52 | 20.16 |
| Solyc01g098310.1.1 | Tomato | cytosol | 26.81 | 19.52 |
| PGSC0003DMT400054841 | Potato | cytosol | 28.92 | 19.43 |
| CDY60893 | Canola | cytosol | 9.04 | 18.87 |
| CDY60894 | Canola | cytosol | 9.04 | 18.87 |
| KRG92798 | Soybean | cytosol | 36.45 | 17.07 |
| CDY08056 | Canola | nucleus | 31.63 | 16.72 |
| CDY27811 | Canola | nucleus | 24.1 | 16.7 |
| CDY24701 | Canola | nucleus | 29.52 | 16.64 |
| CDY13919 | Canola | nucleus | 23.49 | 16.53 |
| CDY05255 | Canola | nucleus | 32.83 | 16.47 |
| CDX86172 | Canola | nucleus | 30.42 | 16.06 |
| CDX92856 | Canola | nucleus | 22.59 | 15.96 |
| CDY51818 | Canola | nucleus | 18.98 | 15.91 |
| Os11t0574200-00 | Rice | cytosol | 15.66 | 15.9 |
| CDY29872 | Canola | cytosol | 21.08 | 15.7 |
| CDX92582 | Canola | nucleus | 39.76 | 15.68 |
| GSMUA_Achr11P... | Banana | nucleus | 30.42 | 15.44 |
| CDY41935 | Canola | cytosol | 24.7 | 15.41 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 35.84 | 15.37 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 33.43 | 15.27 |
| Solyc01g098340.2.1 | Tomato | cytosol | 36.45 | 15.12 |
| CDX80667 | Canola | nucleus | 30.12 | 15.04 |
| CDX76994 | Canola | nucleus | 26.2 | 14.95 |
| CDY27796 | Canola | cytosol | 23.8 | 14.93 |
| CDY35353 | Canola | cytosol | 28.01 | 14.93 |
| PGSC0003DMT400038431 | Potato | nucleus | 34.64 | 14.61 |
| CDY40464 | Canola | nucleus | 21.08 | 14.58 |
| Solyc08g029220.1.1 | Tomato | nucleus | 34.64 | 14.58 |
| PGSC0003DMT400057887 | Potato | cytosol | 36.75 | 14.49 |
| CDY32121 | Canola | nucleus | 19.58 | 13.98 |
| CDX70841 | Canola | nucleus | 60.24 | 13.82 |
| CDY11521 | Canola | nucleus | 24.1 | 13.51 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 25.9 | 13.37 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 26.81 | 13.28 |
| CDX88919 | Canola | cytosol | 62.95 | 13.22 |
| CDY49460 | Canola | nucleus | 25.9 | 13.19 |
| CDY47298 | Canola | cytosol | 23.19 | 13.18 |
| CDY19683 | Canola | cytosol | 27.41 | 13.13 |
| CDX74632 | Canola | cytosol | 23.19 | 13.12 |
| CDX76752 | Canola | nucleus | 24.1 | 12.92 |
| EES08665 | Sorghum | nucleus | 25.3 | 12.37 |
| Solyc01g098250.2.1 | Tomato | nucleus | 36.75 | 12.29 |
| CDX93081 | Canola | nucleus | 25.3 | 12.12 |
| CDY15046 | Canola | nucleus | 25.0 | 12.03 |
| KRH68628 | Soybean | cytosol | 38.25 | 11.9 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 30.72 | 11.72 |
| KRG96896 | Soybean | cytosol | 37.35 | 11.72 |
| PGSC0003DMT400057904 | Potato | nucleus | 37.95 | 11.66 |
| Zm00001d040846_P001 | Maize | cytosol | 32.83 | 11.65 |
| Os06t0535300-01 | Rice | nucleus | 34.34 | 11.2 |
| EER88793 | Sorghum | cytosol | 31.93 | 11.18 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 32.83 | 11.18 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 32.83 | 11.17 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 30.12 | 11.16 |
| CDX99992 | Canola | cytosol | 31.63 | 11.16 |
| EES00793 | Sorghum | cytosol | 32.83 | 11.16 |
| CDY19714 | Canola | nucleus | 32.23 | 11.12 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 32.53 | 11.07 |
| Os01t0375100-01 | Rice | nucleus | 33.43 | 11.01 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 32.23 | 10.96 |
| CDX92583 | Canola | mitochondrion, plastid | 11.45 | 10.95 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 26.51 | 10.93 |
| CDY31307 | Canola | cytosol | 3.01 | 10.87 |
| Zm00001d052947_P001 | Maize | plastid | 28.31 | 10.87 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 33.13 | 10.75 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 29.52 | 10.66 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 30.42 | 10.64 |
| Os11t0578100-00 | Rice | cytosol | 33.73 | 10.64 |
| KXG32106 | Sorghum | cytosol | 32.23 | 10.58 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 32.53 | 10.55 |
| EER98396 | Sorghum | nucleus | 36.14 | 10.52 |
| Zm00001d008412_P001 | Maize | cytosol | 32.23 | 10.5 |
| Zm00001d019461_P002 | Maize | cytosol | 35.24 | 10.48 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 28.92 | 10.45 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 32.53 | 10.44 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 32.53 | 10.44 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 27.11 | 10.36 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 26.81 | 10.3 |
| CDY27809 | Canola | nucleus | 30.72 | 10.28 |
| KXG28768 | Sorghum | nucleus | 30.12 | 10.26 |
| Zm00001d008413_P001 | Maize | cytosol | 31.33 | 10.22 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 26.51 | 10.2 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 31.33 | 10.06 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 35.84 | 9.98 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 35.84 | 9.98 |
| OQU83710 | Sorghum | cytosol | 29.22 | 9.96 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 32.53 | 9.85 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 32.53 | 9.83 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 34.64 | 9.66 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 34.34 | 9.52 |
| Os11t0573800-00 | Rice | nucleus | 26.2 | 9.48 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 32.23 | 9.46 |
| EES09993 | Sorghum | nucleus | 31.02 | 9.34 |
| OQU83709 | Sorghum | cytosol | 31.33 | 8.95 |
| CDY41919 | Canola | nucleus, plastid | 31.02 | 8.65 |
| CDY41917 | Canola | nucleus | 24.7 | 8.58 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 5.42 | 8.18 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 25.6 | 8.05 |
| CDY34931 | Canola | cytosol | 5.42 | 8.0 |
| CDX99362 | Canola | nucleus | 6.63 | 7.72 |
| CDX99361 | Canola | cytosol | 3.31 | 7.53 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 10.84 | 6.67 |
| CDX74082 | Canola | cytosol | 4.52 | 6.64 |
| CDX76476 | Canola | cytosol | 1.81 | 5.88 |
| CDX76474 | Canola | cytosol | 4.22 | 5.83 |
| CDX76475 | Canola | cytosol | 3.61 | 5.83 |
| CDY60890 | Canola | cytosol | 4.22 | 5.79 |
| CDY12382 | Canola | nucleus | 6.33 | 5.74 |
| CDY27107 | Canola | nucleus | 6.33 | 5.74 |
| CDY12569 | Canola | cytosol | 6.02 | 5.59 |
| CDX74107 | Canola | cytosol | 4.22 | 5.22 |
| CDX78941 | Canola | nucleus | 8.13 | 4.89 |
| KRH34004 | Soybean | cytosol | 4.22 | 4.4 |
| CDY08035 | Canola | cytosol | 1.2 | 4.04 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 2.11 | 4.02 |
| KRH34003 | Soybean | cytosol | 3.31 | 3.78 |
| CDX99360 | Canola | cytosol | 3.31 | 3.3 |
| CDX78942 | Canola | cytosol | 3.01 | 3.27 |
| CDX92584 | Canola | mitochondrion | 3.01 | 2.87 |
| CDY09330 | Canola | cytosol | 1.81 | 2.67 |
| CDX76473 | Canola | cytosol | 1.81 | 2.48 |
Protein Annotations
| EnsemblPlants:CDX88917 | EnsemblPlantsGene:GSBRNA2T00149013001 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | ProteinID:CDX88917 |
| ProteinID:CDX88917.1 | UniParc:UPI0004EE77A4 | MapMan:35.2 | : | : | : |
Description
BnaA03g07320D
Coordinates
chrLK031856:-:1589137..1590211
Molecular Weight (calculated)
37085.8 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.540
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MDITSKRKAV AETLMKGTGT AAFYSASDEA VHSPRVSCAV SVGDKRKRNE LGGSNDDGAG LKFNDFEKLR KEVNFLAGQT WAMYDNVDGM PRLYARIRKV
101: SAPLFGLRIT HLEADPDDER EILWFEQDLP VSAGQFRLGK NENMKDCSMF SHVIHCKEGG NTGHLTVSPR KGETWALFKN WDINWSSEPD SHRRYEYDIV
201: EILSDHADGT GVSVAFLHKA KGFASVFFRM GTGVADMFRM GTGGDSDTSQ ILPQDIYQFS HMIPSFKLTG FEAKGLPKDA YELDQAALPE KVEEKDIPSH
301: LIPRPKPEAL CFPSKHTGKV FQTGQHSMRQ QS
101: SAPLFGLRIT HLEADPDDER EILWFEQDLP VSAGQFRLGK NENMKDCSMF SHVIHCKEGG NTGHLTVSPR KGETWALFKN WDINWSSEPD SHRRYEYDIV
201: EILSDHADGT GVSVAFLHKA KGFASVFFRM GTGVADMFRM GTGGDSDTSQ ILPQDIYQFS HMIPSFKLTG FEAKGLPKDA YELDQAALPE KVEEKDIPSH
301: LIPRPKPEAL CFPSKHTGKV FQTGQHSMRQ QS
001: MMDDTVNELL RRKKAVLNHQ IKSDLVASTL ANHQEKPQAF SLLQQKDVQT KSPGTHFSNC AVKVGEKRKR NECGGICNTE NRSMTEDVVN LSKDRNVDSK
101: RSAFSDNGDA TQEFGSGKQL PEVDCSKDPM SNAQVGAVVG NSRNLEVDQN SGLCDSESGG VVPQKISGFA GLKFNDFDKL REEVNFEVGQ TWAIFDPVDG
201: MPRLYAKIIK VSAPCFGLRI TYLEPDPDGE KELQWFEEDL PVSVGNFRLG ENKCTQDRSI FSHVIHCNEL SNTLCFSVTC RFINTCHFSV SPREGETWAL
301: FKNWDIKWSS EPDSHRKYEY EFVEILSDYA DEAGVYVAYL HKAKGFASVF LRMGTGYEGI FRILPRSLYR FSHRVPSFKL TGVKGKDMPK DAYELDQAAL
401: PETIEEIIVP SNSESNIKSK RQAIYIASKG
101: RSAFSDNGDA TQEFGSGKQL PEVDCSKDPM SNAQVGAVVG NSRNLEVDQN SGLCDSESGG VVPQKISGFA GLKFNDFDKL REEVNFEVGQ TWAIFDPVDG
201: MPRLYAKIIK VSAPCFGLRI TYLEPDPDGE KELQWFEEDL PVSVGNFRLG ENKCTQDRSI FSHVIHCNEL SNTLCFSVTC RFINTCHFSV SPREGETWAL
301: FKNWDIKWSS EPDSHRKYEY EFVEILSDYA DEAGVYVAYL HKAKGFASVF LRMGTGYEGI FRILPRSLYR FSHRVPSFKL TGVKGKDMPK DAYELDQAAL
401: PETIEEIIVP SNSESNIKSK RQAIYIASKG
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G18740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.