Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006473.1-P | Field mustard | plastid | 97.88 | 98.44 |
| CDX70837 | Canola | mitochondrion | 61.95 | 86.9 |
| CDX88917 | Canola | nucleus | 29.14 | 62.05 |
| CDX88918 | Canola | cytosol | 44.41 | 59.02 |
| CDX70843 | Canola | extracellular, golgi | 43.71 | 57.12 |
| CDY13918 | Canola | nucleus | 41.58 | 51.31 |
| AT5G18740.1 | Thale cress | nucleus | 29.28 | 48.14 |
| PGSC0003DMT400057888 | Potato | cytosol | 12.59 | 44.95 |
| CDX88920 | Canola | nucleus | 34.65 | 41.67 |
| CDX70840 | Canola | nucleus | 34.37 | 41.61 |
| CDX92586 | Canola | nucleus | 19.66 | 39.71 |
| PGSC0003DMT400089411 | Potato | cytosol | 12.31 | 38.84 |
| CDX92583 | Canola | mitochondrion, plastid | 18.67 | 38.04 |
| CDX74108 | Canola | cytosol | 10.75 | 37.62 |
| CDX70841 | Canola | nucleus | 71.15 | 34.76 |
| CDX88919 | Canola | cytosol | 68.6 | 30.68 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 36.07 | 29.86 |
| PGSC0003DMT400057894 | Potato | cytosol | 14.0 | 25.52 |
| CDX92582 | Canola | nucleus | 29.28 | 24.58 |
| CDY13919 | Canola | nucleus | 16.41 | 24.58 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 14.14 | 23.98 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 21.78 | 22.99 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 23.62 | 22.97 |
| GSMUA_Achr11P... | Banana | nucleus | 20.93 | 22.63 |
| Os11t0574200-00 | Rice | cytosol | 10.33 | 22.32 |
| Solyc01g098340.2.1 | Tomato | cytosol | 25.18 | 22.25 |
| PGSC0003DMT400057893 | Potato | cytosol | 14.85 | 21.69 |
| Solyc01g098310.1.1 | Tomato | cytosol | 13.86 | 21.49 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 23.48 | 21.45 |
| Solyc10g007630.1.1 | Tomato | cytosol | 14.71 | 21.4 |
| PGSC0003DMT400057887 | Potato | cytosol | 25.18 | 21.14 |
| PGSC0003DMT400054841 | Potato | cytosol | 14.71 | 21.05 |
| Solyc01g098330.1.1 | Tomato | nucleus | 11.88 | 20.49 |
| Solyc01g098250.2.1 | Tomato | nucleus | 28.01 | 19.94 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 25.18 | 19.87 |
| Zm00001d040846_P001 | Maize | cytosol | 26.17 | 19.77 |
| CDY24701 | Canola | nucleus | 16.27 | 19.52 |
| CDY60893 | Canola | cytosol | 4.38 | 19.5 |
| CDY60894 | Canola | cytosol | 4.38 | 19.5 |
| KRG92798 | Soybean | cytosol | 19.38 | 19.32 |
| PGSC0003DMT400057904 | Potato | nucleus | 28.71 | 18.78 |
| EER88793 | Sorghum | cytosol | 25.04 | 18.67 |
| EES00793 | Sorghum | cytosol | 25.74 | 18.63 |
| KRH68628 | Soybean | cytosol | 27.86 | 18.46 |
| Os01t0375100-01 | Rice | nucleus | 26.31 | 18.45 |
| KRG96896 | Soybean | cytosol | 27.58 | 18.43 |
| CDY05255 | Canola | nucleus | 17.11 | 18.28 |
| Os11t0578100-00 | Rice | cytosol | 27.16 | 18.23 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 22.07 | 17.93 |
| CDX92856 | Canola | nucleus | 11.88 | 17.87 |
| OQU83710 | Sorghum | cytosol | 24.47 | 17.76 |
| KXG28768 | Sorghum | nucleus | 24.05 | 17.44 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 23.34 | 17.39 |
| CDY08056 | Canola | nucleus | 15.42 | 17.36 |
| Zm00001d052947_P001 | Maize | plastid | 21.22 | 17.34 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 23.9 | 17.32 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 21.22 | 17.26 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 21.07 | 17.25 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 23.76 | 17.23 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 23.76 | 17.21 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 24.89 | 17.2 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 20.93 | 17.15 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 25.04 | 17.12 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 24.75 | 17.09 |
| PGSC0003DMT400038431 | Potato | nucleus | 18.95 | 17.03 |
| CDX76994 | Canola | nucleus | 14.0 | 17.01 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 23.48 | 17.01 |
| CDX99992 | Canola | cytosol | 22.63 | 17.0 |
| CDY41935 | Canola | cytosol | 12.73 | 16.92 |
| Os06t0535300-01 | Rice | nucleus | 24.33 | 16.9 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 21.92 | 16.87 |
| CDY19714 | Canola | nucleus | 22.91 | 16.84 |
| Zm00001d008412_P001 | Maize | cytosol | 24.19 | 16.78 |
| KXG32106 | Sorghum | cytosol | 23.9 | 16.72 |
| CDY35353 | Canola | cytosol | 14.71 | 16.69 |
| CDX86172 | Canola | nucleus | 14.85 | 16.69 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 21.64 | 16.65 |
| CDY27796 | Canola | cytosol | 12.45 | 16.64 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 24.33 | 16.63 |
| Solyc08g029220.1.1 | Tomato | nucleus | 18.53 | 16.6 |
| CDY29872 | Canola | cytosol | 10.47 | 16.59 |
| Zm00001d008413_P001 | Maize | cytosol | 23.76 | 16.5 |
| CDY27811 | Canola | nucleus | 11.17 | 16.49 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 23.62 | 16.15 |
| CDX80667 | Canola | nucleus | 14.99 | 15.94 |
| EER98396 | Sorghum | nucleus | 25.6 | 15.86 |
| CDY40464 | Canola | nucleus | 10.75 | 15.83 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 25.32 | 15.83 |
| CDY27809 | Canola | nucleus | 22.07 | 15.73 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 24.33 | 15.68 |
| CDY51818 | Canola | nucleus | 8.77 | 15.66 |
| Zm00001d019461_P002 | Maize | cytosol | 24.61 | 15.59 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 24.19 | 15.56 |
| CDY11521 | Canola | nucleus | 13.01 | 15.54 |
| EES09993 | Sorghum | nucleus | 23.76 | 15.23 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 25.6 | 15.18 |
| CDY32121 | Canola | nucleus | 9.9 | 15.05 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 25.32 | 15.04 |
| EES08665 | Sorghum | nucleus | 14.43 | 15.02 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 25.32 | 15.02 |
| CDY47298 | Canola | cytosol | 12.31 | 14.9 |
| OQU83709 | Sorghum | cytosol | 24.47 | 14.89 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 22.21 | 14.87 |
| CDX74632 | Canola | cytosol | 12.31 | 14.82 |
| CDX76752 | Canola | nucleus | 12.87 | 14.7 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 24.75 | 14.61 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 16.12 | 14.16 |
| CDY49460 | Canola | nucleus | 12.73 | 13.8 |
| CDY19683 | Canola | cytosol | 13.01 | 13.28 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 12.02 | 13.22 |
| CDX93081 | Canola | nucleus | 12.87 | 13.13 |
| CDY15046 | Canola | nucleus | 12.73 | 13.04 |
| CDY41919 | Canola | nucleus, plastid | 21.92 | 13.01 |
| Os11t0573800-00 | Rice | nucleus | 14.43 | 11.11 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 3.39 | 10.91 |
| CDY34931 | Canola | cytosol | 2.97 | 9.33 |
| CDY41917 | Canola | nucleus | 12.59 | 9.31 |
| CDX74107 | Canola | cytosol | 3.39 | 8.96 |
| CDX74082 | Canola | cytosol | 2.83 | 8.85 |
| CDX99362 | Canola | nucleus | 3.39 | 8.42 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 6.36 | 8.33 |
| CDY12382 | Canola | nucleus | 4.1 | 7.92 |
| CDY27107 | Canola | nucleus | 4.1 | 7.92 |
| CDX76474 | Canola | cytosol | 2.69 | 7.92 |
| CDX76476 | Canola | cytosol | 1.13 | 7.84 |
| CDY12569 | Canola | cytosol | 3.96 | 7.82 |
| KRH34003 | Soybean | cytosol | 3.11 | 7.56 |
| CDX99361 | Canola | cytosol | 1.56 | 7.53 |
| CDY60890 | Canola | cytosol | 2.55 | 7.44 |
| CDY31307 | Canola | cytosol | 0.85 | 6.52 |
| CDX76475 | Canola | cytosol | 1.84 | 6.31 |
| CDY08035 | Canola | cytosol | 0.85 | 6.06 |
| CDX99360 | Canola | cytosol | 2.83 | 6.01 |
| KRH34004 | Soybean | cytosol | 2.69 | 5.97 |
| CDX78942 | Canola | cytosol | 2.55 | 5.88 |
| CDY09330 | Canola | cytosol | 1.84 | 5.78 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.41 | 5.75 |
| CDX78941 | Canola | nucleus | 4.38 | 5.62 |
| CDX76473 | Canola | cytosol | 1.84 | 5.37 |
| CDX92584 | Canola | mitochondrion | 2.12 | 4.3 |
Protein Annotations
| EnsemblPlants:CDX88924 | EnsemblPlantsGene:GSBRNA2T00149020001 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | ProteinID:CDX88924 |
| ProteinID:CDX88924.1 | SEG:seg | UniParc:UPI0004EE28A0 | MapMan:19.4.3.1 | : | : |
Description
BnaA03g07250D
Coordinates
chrLK031856:+:1620358..1622481
Molecular Weight (calculated)
80066.6 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.427
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLTINAVTE TWIKDTSSPK FWTTCPFCSV CYRLHRSFVS KQTRCRCCNK DFTARETPLQ GLSSKDSTPK RILSQMLRET HQYHPVAPSS SGPSFWTTCR
101: NCGCRHRFLR VYLDKWFVCP SCKEETIAME VLSSSGEVRF SKWFQEFRSM CKNEAASVSG NKSSPGEKRK REEEVAALSQ NHSKPDGVIG SGVDNNRRGF
201: NGNGDEASSS GNAKVDNNFC LRDSSSGGGV QPKIAGLKFN DFGKLREEVN FAVGQVWALY DTTDKVPRQY ALIRKVSVPS FGLRITYLEP DPDDEEEIQW
301: FEEDLPVCTG QFRLGKNENT KDRSLFSHVI HCNEGGSNSG HFTVSPRKGE TWALFKNWDI NWSSEPDSHR SYEYEFVEIL SDYTDGAGVY AAILHKAKGF
401: ASVFFPMGTG DADKFYILPH SLYRFYHRIP SFKLTGVDVK GLPKYAYELD QAALPATIEE VTVPSHLLAE FAPPKPEALC FPINGKVFKT GQIWSYIGSN
501: DNMPRDYCRI HKISVTQTFE QAPVYKIVSY RLKAKRLPEE GIIPWEDKKL HVSCGTFLVS KVFAALAPNN FSHLMVPQAS MEGNEYTYTI LPKVGQVWAI
601: YRFWNGFLEE TYEDYVVVEV LDDALDYKVL ALEPALQFIE EKEGKRVFGA AESRPRDYDD GDEVMFTIPK LKVLRFSHQI GASRVTKEID GELKELFELD
701: TAAVPVL
101: NCGCRHRFLR VYLDKWFVCP SCKEETIAME VLSSSGEVRF SKWFQEFRSM CKNEAASVSG NKSSPGEKRK REEEVAALSQ NHSKPDGVIG SGVDNNRRGF
201: NGNGDEASSS GNAKVDNNFC LRDSSSGGGV QPKIAGLKFN DFGKLREEVN FAVGQVWALY DTTDKVPRQY ALIRKVSVPS FGLRITYLEP DPDDEEEIQW
301: FEEDLPVCTG QFRLGKNENT KDRSLFSHVI HCNEGGSNSG HFTVSPRKGE TWALFKNWDI NWSSEPDSHR SYEYEFVEIL SDYTDGAGVY AAILHKAKGF
401: ASVFFPMGTG DADKFYILPH SLYRFYHRIP SFKLTGVDVK GLPKYAYELD QAALPATIEE VTVPSHLLAE FAPPKPEALC FPINGKVFKT GQIWSYIGSN
501: DNMPRDYCRI HKISVTQTFE QAPVYKIVSY RLKAKRLPEE GIIPWEDKKL HVSCGTFLVS KVFAALAPNN FSHLMVPQAS MEGNEYTYTI LPKVGQVWAI
601: YRFWNGFLEE TYEDYVVVEV LDDALDYKVL ALEPALQFIE EKEGKRVFGA AESRPRDYDD GDEVMFTIPK LKVLRFSHQI GASRVTKEID GELKELFELD
701: TAAVPVL
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.