Factsheet for TraesCS1D01G042900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G054900.1	Wheat	nucleus	96.56	96.56
TraesCS1A01G042500.1	Wheat	nucleus	93.12	93.28
HORVU1Hr1G008940.2	Barley	nucleus	87.5	87.06
EER98396	Sorghum	nucleus	54.61	57.06
Zm00001d019461_P002	Maize	cytosol	52.35	55.91
GSMUA_Achr11P...	Banana	nucleus	24.58	44.8
PGSC0003DMT400057888	Potato	cytosol	6.8	40.91
GSMUA_Achr2P02410_001	Banana	cytosol	26.09	40.18
GSMUA_Achr5P00460_001	Banana	cytosol	23.83	39.06
PGSC0003DMT400089411	Potato	cytosol	7.13	37.95
CDY13919	Canola	nucleus	14.85	37.5
VIT_05s0020g02050.t01	Wine grape	nucleus	26.26	37.48
CDX74107	Canola	cytosol	8.31	36.94
TraesCS6D01G155600.1	Wheat	cytosol	29.45	35.96
CDX88917	Canola	nucleus	9.98	35.84
Bra039476.1-P	Field mustard	cytosol	6.04	34.95
KRH11282	Soybean	nucleus	28.02	34.5
KRH50936	Soybean	nucleus	27.52	34.24
KRH21004	Soybean	nucleus	27.77	34.19
Solyc01g067770.1.1	Tomato	extracellular, vacuole	7.8	34.07
CDX92582	Canola	nucleus	23.99	33.97
TraesCS3D01G215900.1	Wheat	nucleus	28.44	33.11
CDY24701	Canola	nucleus	16.02	32.43
Bra001194.1-P	Field mustard	cytosol	5.45	32.18
Solyc01g067780.1.1	Tomato	cytosol	24.33	32.12
CDY08056	Canola	nucleus	16.78	31.85
PGSC0003DMT400058792	Potato	nucleus	24.5	31.84
Solyc08g029220.1.1	Tomato	nucleus	21.06	31.81
KRH34004	Soybean	cytosol	8.47	31.76
Solyc01g098250.2.1	Tomato	nucleus	26.34	31.62
KRH34003	Soybean	cytosol	7.72	31.62
KRH02180	Soybean	cytosol, nucleus, plastid	27.6	31.51
PGSC0003DMT400038431	Potato	nucleus	20.81	31.51
CDX74108	Canola	cytosol	5.29	31.19
VIT_14s0030g00640.t01	Wine grape	nucleus	30.45	31.05
KRG92798	Soybean	cytosol	18.37	30.89
PGSC0003DMT400058788	Potato	nucleus	12.58	30.67
CDX70837	Canola	mitochondrion	12.92	30.56
Bra006479.1-P	Field mustard	cytosol	14.01	30.25
PGSC0003DMT400057904	Potato	nucleus	27.35	30.16
Bra020757.1-P	Field mustard	nucleus	16.44	30.02
CDY05255	Canola	nucleus	16.53	29.76
CDX70843	Canola	extracellular, golgi	13.42	29.57
KRG96896	Soybean	cytosol	26.09	29.4
Bra009972.1-P	Field mustard	nucleus	15.44	29.25
CDX86172	Canola	nucleus	15.44	29.25
CDX99992	Canola	cytosol	23.07	29.22
Bra006478.1-P	Field mustard	nucleus	13.0	29.14
CDX88918	Canola	cytosol	13.0	29.14
CDX80667	Canola	nucleus	16.11	28.87
KRH68628	Soybean	cytosol	25.84	28.87
Solyc10g007630.1.1	Tomato	cytosol	11.74	28.81
CDY19714	Canola	nucleus	23.15	28.69
TraesCS2D01G082800.1	Wheat	nucleus	26.26	28.48
PGSC0003DMT400086601	Potato	cytosol	4.78	28.36
PGSC0003DMT400094016	Potato	nucleus	6.96	28.33
CDY13918	Canola	nucleus	13.51	28.1
Bra002183.1-P	Field mustard	nucleus	13.34	27.99
PGSC0003DMT400054841	Potato	cytosol	11.41	27.53
TraesCS2D01G077700.1	Wheat	cytosol	19.88	27.46
PGSC0003DMT400057894	Potato	cytosol	8.89	27.32
CDX70840	Canola	nucleus	12.92	26.37
TraesCS3D01G541800.1	Wheat	cytosol	16.36	26.14
Bra006476.1-P	Field mustard	nucleus	12.84	26.02
CDX88920	Canola	nucleus	12.84	26.02
Solyc01g098340.2.1	Tomato	cytosol	17.45	26.0
CDY27809	Canola	nucleus	21.48	25.81
TraesCS4D01G315600.1	Wheat	cytosol	16.44	25.76
Bra006473.1-P	Field mustard	plastid	15.1	25.6
PGSC0003DMT400057887	Potato	cytosol	18.04	25.53
Solyc01g098310.1.1	Tomato	cytosol	9.73	25.44
CDX88924	Canola	plastid	15.02	25.32
PGSC0003DMT400057893	Potato	cytosol	10.23	25.21
CDX92586	Canola	nucleus	7.3	24.86
TraesCS2D01G283100.2	Wheat	cytosol	15.27	24.83
TraesCS3D01G434400.1	Wheat	cytosol	15.18	24.46
Solyc01g098330.1.1	Tomato	nucleus	7.97	23.17
CDY41935	Canola	cytosol	10.23	22.93
CDY27796	Canola	cytosol	10.15	22.87
Bra039461.1-P	Field mustard	cytosol	10.15	22.7
Bra024236.1-P	Field mustard	nucleus	6.96	22.55
CDY41919	Canola	nucleus, plastid	22.23	22.25
Bra039477.1-P	Field mustard	plastid	9.9	21.93
TraesCS2D01G078000.1	Wheat	cytosol	11.49	21.31
CDX92856	Canola	nucleus	8.22	20.85
CDY29872	Canola	cytosol	7.38	19.73
TraesCS5D01G508400.1	Wheat	plastid	5.37	17.93
TraesCS2D01G077900.1	Wheat	cytosol	7.3	16.11
CDY27811	Canola	nucleus	6.46	16.08
CDY13917	Canola	endoplasmic reticulum, extracellular, mitochondrion	5.54	15.83
CDX70844	Canola	mitochondrion, plasma membrane	11.07	15.46
Bra002182.1-P	Field mustard	nucleus	13.67	15.02
Bra039474.1-P	Field mustard	nucleus	16.95	13.24
Bra006477.1-P	Field mustard	cytosol	15.18	13.16
CDX70841	Canola	nucleus	14.43	11.89
CDX88919	Canola	cytosol	14.6	11.01
CDY41917	Canola	nucleus	8.39	10.46

Protein Annotations

EnsemblPlants:TraesCS1D01G042900.1	EnsemblPlantsGene:TraesCS1D01G042900	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625
SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2	:

Description

No Description!

Coordinates

chr1D:-:21828335..21837385

Molecular Weight (calculated)

131844.0 Da

IEP (calculated)

8.072

GRAVY (calculated)

-0.734

Length

1192 amino acids

Sequence
(BLAST)

0001: MECNKEEASR AKDVSERKLH EADFPGAKKM AVKAHQLFPG LENISQLLAV CEVHCSSSVK INGETDWYGI LQVEPTADDM ALKKQYRKLA LLLHPDKNKF
0101: AGAEAAFKLI GEAYMTLTDH VKRSSHDNKR KAVFATSAPV PKKRARASKK TDPAHKTNNK ENFGAPQTQK NPQQQAGKSS GLSSFWTICL TCGTKYQYPC
0201: SSLMRFVLCR ICSRSFLAYD LSKKSVPAGV DTAYPGSGFG TQPQKFPPSQ QAHVTYQGQN NQSFPGWTHP AHQQQQSQNV PNQQTPAANQ QQHSQRRPPS
0301: AGSKNAMSSE GVGDPNNKGA TDSTKVSRAP SRKQNGAGRT ELPFAQQSQD VPNQQTATAN QQQQSQSRPP SAVPTNVMSS EGLGDPNSKG ATESTKVSSA
0401: PIKEKDGADR TELPFVPSAK LSPTNMQKRG IQSQHFPSQQ TSPVNQQVQS QKPSFNEGSS NLNSMGVSDS NVTVNARTCT NMNVPRASLN KENGSSRTES
0501: PLASSDKVSP ANMGKGVMKD ANGAVKTGQN PQRSSQQENN VSNEDGSGGC RKGSDNLHDP PVAKRIRKGY SSLNADKNGG TVREDGNVYT AQACSIPITK
0601: TPNENLEVVN GLDEKQGASK KEELHNSGRD GVASSVVNSI PCEGDVSYPD PEFYDFEENR DAARFKADQI WAVYDDSDSM PRYYARIKQV HPNFMLWFSW
0701: LEFDPLNDAE KAWYSKDMPV ACGRFRIGKT ILTEDRKMFS HVVSWTKGKK RNSYEIYPVK GEVWALFRRC DFNPSSGSSD HKNYRYDIVE IKSDFAVGVG
0801: TYVTPLVKVK GFVSLFVRSD KEEPSLIPGG DTLRFSHNIP FHRLSEADKP HIPNGAFELD PASMPSNLEE ASSSADLNRS STQEGNIGGN VSSTRDFFKC
0901: EMPAGKTKEG LDSAATNEGN VHNGVKKPNI NADGKHDNGS EASVIDAHTV DQWDDSFQSE SPATFVYPEP EFFNFGDIRS FDKFKSGQIW ALYCDIDKFP
1001: KYYAFIKKVD QDDLTIHIRW LEYCPCGETE KRLVQAGLSA SCGIFRLSSQ SDNYDCTSVF SHIMEVTPVS KGKKYEILPR VGQVWAIYKN WNRGWSFENF
1101: KSCEYDLVEV LEISAASLTL SYLTKVDGFS TVFMLERKGE STSAVKILRS DMMMFSHQIP SYRMTNEGDE LCGYWELDPA SVPENFLARK TK

Best Arabidopsis Sequence Match ( AT3G04980.2 )
(BLAST)

0001: MECNKEDAIR ASKIAEEKME AGDFVGAHKF VTKAQRLFPN LENIVQMMTI CDVHSSAIKK IKGLDDWYGV LQVQPYADAD TIKKQYRKLA LLLHPDKNKF
0101: AGAEAAFKLV GEANRLLSDQ IKRSQYDNRY RSHSMFANRH VNVYSGRHCA ATNNAAENIA GVFTFWTRCR HCGQCYKYLR EYMNTSMHCS SCQKSFVACK
0201: MRCDGVPPSS STAGRKEFQD QVMSNTSRQN ASTAAESGSS AADMGKNGKV GGKVNKKNQE KQKNGAVNRG TKKEEGCTEN DAEGRKPQTS ETGTNISAEM
0301: PKADVLKPQH QVKEEPDTSA EKSIPDLSAP QKNRAPKKKR KVVEESSKSF EVDSSDTAGA KTDTNEHNKR KSSRKKPQVS YAKEGSDGDF VSPPNKKTKS
0401: GFEFESEPNK KQTAEDNKSP KLAVSGVSSA SSHSYKGKAK KNAHSGNEDN LSAKNKVSEG CDGNGEDAAL LSKIGRVEKG YKANENSNPL DIPDLEFSVF
0501: KVERKTEDFA VNQVWSTTTD CRDGMPRKYA RVKKVLNGEF KLRITYLDPV LDKTDESIPV ACGKFKNGKT MEVKDSSIFS GQMHHLRCNN IVSIYPRKGE
0601: IWAIFREWEE EWNTSLKKHK FPYKYDFVEI VSDFHDLNGV GVAYLGKLKG SVQLFHWEPQ HGICQIQCSP KDMLRFSHKV PAVKMTGKEK ESVPPNSYEL
0701: DPAALPKDIF QVDAVDMEMD SEILKGKADG PYKVGAKAKA VQETASSPRK RQKSDDDNDD GVCSNLGEVI GGSNRSHIFS SCEVDDKNTS TKSRKDGEST
0801: DVFRLRKSPR LQTIPNHQGD EKKSAKQGNK MNTPKKMDKG LVTDSLGVDE KKTSKSRKNG EATDVFKLRK SPRLQTIPSQ QGDEMKSTKQ GNKMNTPKKT
0901: DKGLETDSLG VRKSPNGIHQ PAESQEGESS KKQGCNGEIP SLSKQNDLPT QLGGSTYKSP RTTHVSPHCK TPRRNAFDFQ NLRSEDKFEV NQIWAIYSND
1001: NGMPLEYVKI KKIETKPKFV LRGTPTELYP PSTEPVTRTV SCGEFKLLKG RPKIIPHASF SHLVKPFDSS KRFRFKVYPR KGEIWALYKN CDSTEEPDIV
1101: EVVEDNCDGE IVKVVALTAM GSSFQRKQGS DVGLIDISKA EMSRFSHQIP AIRHPKKTTR LVKGGYYWEL DPIAIPSRTI VID

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.