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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • extracellular 1
  • plastid 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, golgi, nucleus, plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085016 Potato cytosol 45.27 70.0
PGSC0003DMT400092668 Potato cytosol 39.8 54.05
PGSC0003DMT400086295 Potato mitochondrion 58.21 53.67
PGSC0003DMT400094007 Potato extracellular, plasma membrane 71.14 50.18
PGSC0003DMT400057888 Potato cytosol 27.36 27.78
PGSC0003DMT400089411 Potato cytosol 27.36 24.55
PGSC0003DMT400092645 Potato cytosol 15.42 24.03
PGSC0003DMT400094016 Potato nucleus 33.33 22.87
Bra001194.1-P Field mustard cytosol 20.9 20.79
PGSC0003DMT400085685 Potato plastid 17.41 20.47
CDX74108 Canola cytosol 20.4 20.3
PGSC0003DMT400080343 Potato cytosol 60.2 19.61
PGSC0003DMT400096427 Potato cytosol 59.2 19.35
Os11t0574200-00 Rice cytosol 25.87 15.9
PGSC0003DMT400094974 Potato cytosol 19.4 14.29
PGSC0003DMT400058792 Potato nucleus 65.17 14.29
PGSC0003DMT400097263 Potato cytosol 9.45 13.1
PGSC0003DMT400057894 Potato cytosol 24.88 12.89
PGSC0003DMT400058788 Potato nucleus 26.87 11.04
PGSC0003DMT400057893 Potato cytosol 25.87 10.74
PGSC0003DMT400092747 Potato cytosol 12.94 10.57
PGSC0003DMT400054841 Potato cytosol 23.88 9.72
VIT_05s0020g02050.t01 Wine grape nucleus 38.31 9.22
PGSC0003DMT400057887 Potato cytosol 35.82 8.55
TraesCS4A01G214500.1 Wheat nucleus 27.86 8.36
GSMUA_Achr5P00460_001 Banana cytosol 29.35 8.12
CDX92582 Canola nucleus 33.83 8.08
GSMUA_Achr2P02410_001 Banana cytosol 30.85 8.01
KRH21004 Soybean nucleus 37.31 7.75
KRH11282 Soybean nucleus 36.82 7.64
Bra020757.1-P Field mustard nucleus 24.38 7.5
AT5G18750.1 Thale cress nucleus 32.84 7.47
CDY24701 Canola nucleus 21.39 7.3
CDY05255 Canola nucleus 23.88 7.25
PGSC0003DMT400038431 Potato nucleus 28.36 7.24
KRH50936 Soybean nucleus 33.83 7.1
TraesCS2D01G078000.1 Wheat cytosol 21.89 6.84
Zm00001d040846_P001 Maize cytosol 31.84 6.84
Zm00001d052947_P001 Maize plastid 29.35 6.82
HORVU2Hr1G013270.2 Barley cytosol 29.35 6.79
GSMUA_Achr11P... Banana nucleus 21.89 6.73
PGSC0003DMT400057904 Potato nucleus 35.82 6.66
EES00793 Sorghum cytosol 32.34 6.65
EER88793 Sorghum cytosol 30.85 6.54
TraesCS2B01G366100.1 Wheat cytosol 29.85 6.53
TraesCS2A01G347700.1 Wheat mitochondrion 29.85 6.53
KRH02180 Soybean cytosol, nucleus, plastid 33.83 6.51
TraesCS4B01G101500.1 Wheat cytosol 28.86 6.47
HORVU2Hr1G084660.1 Barley cytosol 27.86 6.44
AT3G06340.4 Thale cress cytosol 21.39 6.39
PGSC0003DMT400039476 Potato nucleus 25.37 6.34
TraesCS2A01G080400.1 Wheat cytosol 25.37 6.34
TraesCS3B01G244000.4 Wheat nucleus 32.34 6.29
TraesCS3D01G215900.1 Wheat nucleus 31.84 6.25
KXG32106 Sorghum cytosol 31.34 6.23
HORVU4Hr1G043860.4 Barley cytosol 29.35 6.22
CDY08056 Canola nucleus 19.4 6.21
PGSC0003DMT400059130 Potato cytosol 23.88 6.17
TraesCS3A01G213800.3 Wheat nucleus 31.34 6.16
TraesCS2D01G077700.1 Wheat cytosol 26.37 6.14
KXG28768 Sorghum nucleus 28.86 5.95
Os06t0535300-01 Rice nucleus 29.85 5.89
EES08665 Sorghum nucleus 19.9 5.89
Zm00001d008412_P001 Maize cytosol 29.85 5.89
OQU83710 Sorghum cytosol 28.36 5.85
HORVU7Hr1G050080.1 Barley nucleus 29.85 5.8
TraesCS2B01G095100.1 Wheat cytosol 24.88 5.79
Os01t0375100-01 Rice nucleus 28.86 5.75
HORVU3Hr1G051850.2 Barley nucleus 32.34 5.75
PGSC0003DMT400023514 Potato cytosol 20.9 5.71
PGSC0003DMT400015678 Potato nucleus 22.39 5.71
TraesCS2A01G084900.1 Wheat nucleus 29.35 5.71
Os11t0578100-00 Rice cytosol 29.85 5.7
TraesCS2D01G082800.1 Wheat nucleus 30.85 5.64
TraesCS2B01G099600.2 Wheat nucleus 30.35 5.56
Zm00001d008413_P001 Maize cytosol 27.86 5.5
TraesCS6A01G167100.1 Wheat cytosol 26.37 5.43
PGSC0003DMT400048481 Potato cytosol 20.9 5.36
TraesCS6D01G155600.1 Wheat cytosol 25.87 5.33
TraesCS6B01G194500.1 Wheat cytosol 25.87 5.33
HORVU6Hr1G033850.1 Barley cytosol 25.37 5.23
Os11t0573800-00 Rice nucleus 23.88 5.23
OQU83709 Sorghum cytosol 29.85 5.16
OQU83714 Sorghum cytosol, nucleus, plastid 26.37 5.02
EES09993 Sorghum nucleus 27.36 4.99
TraesCS1B01G054900.1 Wheat nucleus 28.86 4.87
Zm00001d019461_P002 Maize cytosol 26.87 4.84
EER98396 Sorghum nucleus 27.36 4.82
TraesCS1A01G042500.1 Wheat nucleus 28.36 4.79
TraesCS1D01G042900.1 Wheat nucleus 28.36 4.78
HORVU1Hr1G008940.2 Barley nucleus 27.86 4.67
PGSC0003DMT400047612 Potato nucleus 20.9 4.58
CDY13919 Canola nucleus 8.96 3.81
PGSC0003DMT400003010 Potato nucleus 3.48 2.76
CDX74107 Canola cytosol 0.5 0.37
TraesCS2D01G077900.1 Wheat cytosol 0.5 0.19
PGSC0003DMT400039473 Potato nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400086601EnsemblPlantsGene:PGSC0003DMG400036172InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926PGSC:PGSC0003DMG400036172
UniParc:UPI000294D0AEUniProt:M1DC40MapMan:35.2:::
Description
Heat shock protein DnaJ [Source:PGSC_GENE;Acc:PGSC0003DMG400036172]
Coordinates
chr1:+:59592990..59593595
Molecular Weight (calculated)
23184.7 Da
IEP (calculated)
7.016
GRAVY (calculated)
-0.353
Length
201 amino acids
Sequence
(BLAST)
001: MFSHLACSMN RNNYDAINIF PLEGETWLLS KDWDMNWCPH LENNKNFNYK FIEVLSNYVD SIGVHVAYLV KAKGFTCLFH RARDPFLVSA MDMFRFSHRI
101: PSMKMTGMER DNVPEGSFEL NPSSLPTYQV DISASSIDQR EPSNFMDSVN SAENLIGSVP NKVPEPEFYK FSAERSLKKF KFGECWVIYS KKMPCPVTMG
201: K
Best Arabidopsis Sequence Match ( AT3G04960.2 )
(BLAST)
001: MEKEVSVRNQ ILELEKKEER LRLVEERERK IEASFSTLQE KGNESDLILL MEANVMRLVL QMQFEQVVVA QLNAQENFLG SLHDSMMKKH EELMTELEAR
101: KNEVALISKT IDAKTCDLDM KVKDFDLKQT TESERMRKET ELMETSLKQL EARENELRLL NETIQGKSME LEKKEVNFQL KHEAAARETE VKNKFLELKE
201: KKLEEREQHL ELKQRKKEKP AIRAETRKRS RLEYESPLSA EKGRYAETLI RPGKKQVQKR EAHEIIYIDE DEPFNCPDPD FHDFNNTMSS FAVGQVWALY
301: DPVDDMPRYY AEIRKVLQPQ LSLRVTWLES LQTTEEPIPA CGRFEHGKSE TSSHLMFSHE MYHTIRGQYV TINPRKGETW ALFGDWTKTW KSHSEQQKTP
401: YSYDFVEVVT EFDSDRGIGV AYLGRVEGFT SVYERAAQNG LVEIMISCDE MLRFSHRVPS FKMTGDEKEG VPAGSFELDP AAVPRVYLKD AKVKEEKMEP
501: IVLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.