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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • extracellular 1
  • plastid 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, golgi, nucleus, plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085016 Potato cytosol 47.3 53.85
PGSC0003DMT400086295 Potato mitochondrion 68.92 46.79
PGSC0003DMT400086601 Potato cytosol 54.05 39.8
PGSC0003DMT400094007 Potato extracellular, plasma membrane 65.54 34.04
PGSC0003DMT400057888 Potato cytosol 28.38 21.21
PGSC0003DMT400089411 Potato cytosol 27.03 17.86
PGSC0003DMT400092645 Potato cytosol 13.51 15.5
PGSC0003DMT400085685 Potato plastid 16.89 14.62
Solyc07g039220.1.1 Tomato cytosol 30.41 12.75
PGSC0003DMT400097263 Potato cytosol 12.16 12.41
PGSC0003DMT400080343 Potato cytosol 48.65 11.67
PGSC0003DMT400096427 Potato cytosol 47.3 11.38
PGSC0003DMT400094974 Potato cytosol 18.92 10.26
PGSC0003DMT400058792 Potato nucleus 56.76 9.16
PGSC0003DMT400092747 Potato cytosol 14.86 8.94
PGSC0003DMT400057894 Potato cytosol 22.97 8.76
PGSC0003DMT400054841 Potato cytosol 27.7 8.3
PGSC0003DMT400057893 Potato cytosol 27.03 8.26
GSMUA_Achr11P... Banana cytosol 22.97 6.77
GSMUA_Achr8P00660_001 Banana cytosol 27.03 6.64
GSMUA_Achr10P... Banana cytosol 23.65 5.71
Os04t0388800-01 Rice nucleus 22.3 5.52
GSMUA_Achr2P21160_001 Banana cytosol 19.59 5.39
GSMUA_Achr3P02570_001 Banana nucleus 18.92 5.35
PGSC0003DMT400039476 Potato nucleus 29.05 5.34
PGSC0003DMT400038431 Potato nucleus 28.38 5.34
Zm00001d025584_P001 Maize cytosol 26.35 5.32
Zm00001d025585_P001 Maize cytosol 26.35 5.32
EES07899 Sorghum cytosol 25.68 5.17
EES10933 Sorghum cytosol 25.0 5.11
GSMUA_Achr6P12230_001 Banana nucleus 19.59 5.0
Os01t0923800-01 Rice nucleus 25.0 4.97
Zm00001d050565_P001 Maize cytosol 21.62 4.97
Os03t0401200-01 Rice cytosol 25.0 4.95
PGSC0003DMT400059130 Potato cytosol 25.68 4.88
TraesCS5A01G493100.1 Wheat cytosol 25.0 4.86
TraesCS3A01G536400.1 Wheat cytosol 24.32 4.85
TraesCS3B01G607500.1 Wheat cytosol 24.32 4.85
TraesCS3B01G470100.1 Wheat nucleus 23.65 4.82
PGSC0003DMT400094016 Potato nucleus 9.46 4.78
TraesCS4D01G315600.1 Wheat cytosol 24.32 4.73
PGSC0003DMT400058788 Potato nucleus 15.54 4.7
TraesCS3D01G541800.1 Wheat cytosol 23.65 4.69
Os02t0510000-01 Rice cytosol 22.97 4.63
PGSC0003DMT400048481 Potato cytosol 24.32 4.6
PGSC0003DMT400015678 Potato nucleus 24.32 4.57
TraesCS3A01G435100.1 Wheat nucleus 24.32 4.55
OQU85000 Sorghum cytosol 22.3 4.53
PGSC0003DMT400057887 Potato cytosol 25.68 4.51
TraesCS2A01G284200.2 Wheat cytosol 22.3 4.5
TraesCS2D01G283100.2 Wheat cytosol 22.3 4.5
PGSC0003DMT400023514 Potato cytosol 22.3 4.49
EES10633 Sorghum cytosol 20.95 4.22
Zm00001d003948_P001 Maize cytosol 20.95 4.21
Zm00001d025238_P001 Maize cytosol 20.27 4.09
TraesCS2B01G301100.1 Wheat cytosol 18.92 3.97
KXG34016 Sorghum nucleus 21.62 3.86
PGSC0003DMT400057904 Potato nucleus 27.7 3.79
Zm00001d011997_P001 Maize nucleus 20.95 3.77
TraesCS4B01G319100.1 Wheat cytosol 16.89 3.51
PGSC0003DMT400047612 Potato nucleus 20.95 3.38
PGSC0003DMT400003010 Potato nucleus 3.38 1.97
KRG89459 Soybean cytosol 0.68 0.92
Bra020955.1-P Field mustard cytosol 0.0 0.0
PGSC0003DMT400039473 Potato nucleus 0.0 0.0
CDY09330 Canola cytosol 0.0 0.0
CDX76473 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400092668EnsemblPlantsGene:PGSC0003DMG400042239InterPro:DUF3444ncoils:CoilPANTHER:PTHR45089PFAM:PF11926
PGSC:PGSC0003DMG400042239UniParc:UPI000295D9A4UniProt:M1DQA5MapMan:35.2::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400042239]
Coordinates
chr1:+:59684358..59687509
Molecular Weight (calculated)
16947.2 Da
IEP (calculated)
4.506
GRAVY (calculated)
-0.216
Length
148 amino acids
Sequence
(BLAST)
001: MKEVEDVAKQ QMEPVIAFPY QILGSALAPS RDEFRLGNSK DIEDLPMFSY LACSMNGNNY DAIKIFPLEG ETWPFSKDWD MNWCPHLGSN KNLNYDFIDV
101: LSNYVDSSGV HAAYLVKSKG FTCLLRQAGD PFLVLEKDMF RFSHEFLL
Best Arabidopsis Sequence Match ( AT5G18730.1 )
(BLAST)
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.