Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G536400.1 | Wheat | cytosol | 97.32 | 97.84 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 97.05 | 97.57 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 87.13 | 85.3 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 77.75 | 76.22 |
| Os03t0401200-01 | Rice | cytosol | 69.3 | 69.12 |
| EES07899 | Sorghum | cytosol | 65.68 | 66.67 |
| Zm00001d025584_P001 | Maize | cytosol | 65.01 | 66.17 |
| Zm00001d025585_P001 | Maize | cytosol | 64.88 | 66.03 |
| EES10933 | Sorghum | cytosol | 60.59 | 62.43 |
| Bra020958.1-P | Field mustard | cytosol | 7.64 | 55.88 |
| CDX76476 | Canola | cytosol | 7.64 | 55.88 |
| Bra031906.1-P | Field mustard | cytosol | 6.57 | 53.26 |
| CDY31307 | Canola | cytosol | 6.57 | 53.26 |
| PGSC0003DMT400039473 | Potato | nucleus | 10.32 | 52.03 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 16.76 | 51.65 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 11.93 | 51.15 |
| Solyc03g007280.2.1 | Tomato | cytosol | 13.0 | 49.74 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 16.76 | 49.6 |
| CDX99361 | Canola | cytosol | 9.65 | 49.32 |
| Solyc03g019630.1.1 | Tomato | nucleus | 10.19 | 48.72 |
| Bra020957.1-P | Field mustard | cytosol | 13.27 | 48.06 |
| CDX76475 | Canola | cytosol | 13.14 | 47.57 |
| KRH64496 | Soybean | nucleus | 43.16 | 46.53 |
| KRH53452 | Soybean | cytosol | 42.63 | 45.95 |
| CDY49460 | Canola | nucleus | 38.34 | 43.87 |
| CDY19683 | Canola | cytosol | 40.35 | 43.43 |
| Bra003079.1-P | Field mustard | cytosol | 40.88 | 43.02 |
| PGSC0003DMT400023514 | Potato | cytosol | 42.23 | 42.86 |
| KRG89459 | Soybean | cytosol | 6.17 | 42.2 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 45.98 | 41.98 |
| KRH09248 | Soybean | nucleus | 43.3 | 41.46 |
| CDY27107 | Canola | nucleus | 19.97 | 40.71 |
| CDX99362 | Canola | nucleus | 15.55 | 40.7 |
| KRH16532 | Soybean | cytosol | 41.96 | 40.65 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 40.48 | 40.65 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 37.67 | 40.49 |
| CDY12382 | Canola | nucleus | 19.71 | 40.16 |
| KRH38748 | Soybean | nucleus | 43.43 | 39.9 |
| KRH18160 | Soybean | nucleus | 41.15 | 39.82 |
| Bra038959.1-P | Field mustard | nucleus | 20.51 | 39.74 |
| PGSC0003DMT400059130 | Potato | cytosol | 41.29 | 39.59 |
| AT5G53150.3 | Thale cress | cytosol | 39.95 | 39.47 |
| KRH14137 | Soybean | nucleus | 37.27 | 39.32 |
| KRH73997 | Soybean | nucleus | 37.13 | 39.29 |
| CDY09330 | Canola | cytosol | 11.8 | 39.11 |
| CDY60893 | Canola | cytosol | 8.31 | 38.99 |
| CDY60894 | Canola | cytosol | 8.31 | 38.99 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 38.2 | 38.88 |
| Solyc01g044270.2.1 | Tomato | cytosol | 40.35 | 38.69 |
| Bra034258.1-P | Field mustard | cytosol | 32.04 | 38.61 |
| CDX78942 | Canola | cytosol | 15.82 | 38.56 |
| CDX76474 | Canola | cytosol | 12.33 | 38.33 |
| AT5G37380.6 | Thale cress | nucleus | 22.12 | 38.28 |
| CDX76994 | Canola | nucleus | 29.36 | 37.63 |
| CDX76473 | Canola | cytosol | 12.2 | 37.6 |
| CDY35353 | Canola | cytosol | 31.37 | 37.56 |
| CDY60890 | Canola | cytosol | 11.93 | 36.78 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 42.63 | 35.89 |
| CDX99360 | Canola | cytosol | 15.82 | 35.44 |
| AT2G25560.1 | Thale cress | cytosol | 30.83 | 35.06 |
| Bra020955.1-P | Field mustard | cytosol | 13.0 | 34.4 |
| CDY15046 | Canola | nucleus | 31.77 | 34.35 |
| Bra013179.1-P | Field mustard | nucleus | 31.9 | 34.34 |
| CDX93081 | Canola | nucleus | 31.9 | 34.34 |
| Bra035378.1-P | Field mustard | cytosol | 31.5 | 34.16 |
| AT2G05230.1 | Thale cress | cytosol | 32.31 | 34.14 |
| AT2G05250.1 | Thale cress | cytosol | 32.31 | 34.14 |
| CDY11521 | Canola | nucleus | 27.08 | 34.12 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 10.05 | 34.09 |
| CDX76752 | Canola | nucleus | 28.28 | 34.09 |
| Bra007790.1-P | Field mustard | nucleus | 26.94 | 33.95 |
| PGSC0003DMT400048481 | Potato | cytosol | 35.39 | 33.72 |
| PGSC0003DMT400039476 | Potato | nucleus | 36.33 | 33.66 |
| PGSC0003DMT400015678 | Potato | nucleus | 35.52 | 33.63 |
| KRH63773 | Soybean | nucleus | 36.46 | 33.46 |
| AT5G50115.1 | Thale cress | cytosol | 21.72 | 33.4 |
| Solyc05g040050.1.1 | Tomato | nucleus | 34.99 | 33.33 |
| KRH54176 | Soybean | nucleus | 35.39 | 33.29 |
| Solyc07g047690.1.1 | Tomato | nucleus | 35.12 | 33.25 |
| CDY47298 | Canola | cytosol | 26.01 | 33.22 |
| AT5G35753.1 | Thale cress | cytosol | 19.03 | 33.1 |
| CDX74632 | Canola | cytosol | 25.87 | 32.88 |
| Bra020956.1-P | Field mustard | nucleus | 15.15 | 32.38 |
| CDY12569 | Canola | cytosol | 14.21 | 29.61 |
| Bra040300.1-P | Field mustard | cytosol | 14.61 | 29.54 |
| AT4G19580.1 | Thale cress | cytosol | 12.33 | 29.49 |
| Solyc03g019640.1.1 | Tomato | nucleus | 36.6 | 29.39 |
| PGSC0003DMT400085016 | Potato | cytosol | 5.09 | 29.23 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 8.31 | 28.44 |
| Bra013404.1-P | Field mustard | nucleus | 15.95 | 26.68 |
| AT5G62780.1 | Thale cress | cytosol | 7.24 | 26.09 |
| Bra013403.1-P | Field mustard | nucleus | 18.77 | 25.83 |
| PGSC0003DMT400092645 | Potato | cytosol | 4.42 | 25.58 |
| CDX78941 | Canola | nucleus | 18.77 | 25.36 |
| Solyc01g057650.1.1 | Tomato | cytosol | 5.5 | 23.98 |
| PGSC0003DMT400092668 | Potato | cytosol | 4.69 | 23.65 |
| AT4G19570.1 | Thale cress | nucleus | 16.76 | 22.4 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 8.31 | 21.75 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 25.2 | 19.26 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 25.87 | 18.85 |
| Solyc07g039220.1.1 | Tomato | cytosol | 8.85 | 18.7 |
| Solyc01g057750.1.1 | Tomato | cytosol | 14.34 | 17.26 |
| PGSC0003DMT400080343 | Potato | cytosol | 13.94 | 16.86 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 14.48 | 16.8 |
| PGSC0003DMT400096427 | Potato | cytosol | 13.67 | 16.59 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 26.14 | 16.36 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 23.73 | 16.11 |
| TraesCS3D01G434400.1 | Wheat | cytosol | 14.88 | 15.0 |
| TraesCS5D01G508400.1 | Wheat | plastid | 6.84 | 14.29 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 15.28 | 13.21 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 8.98 | 12.41 |
| Bra002184.1-P | Field mustard | cytosol | 0.27 | 0.76 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G541800.1 | EnsemblPlantsGene:TraesCS3D01G541800 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 |
| TIGR:cd06257 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:612901757..612903997
Molecular Weight (calculated)
83331.9 Da
IEP (calculated)
8.141
GRAVY (calculated)
-0.649
Length
746 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNKDEALR AKQIAERKFE SKDLQGAKKF ALKAKSLFPD LEGIMQLIIT FDVYLTSELK VAGENDYYSI LSVDTSADDE TVKKQYRKLA LLLHPDKNKS
101: VGAEGAFQLV KEAWTVLSDK TKRLLYDQKR KVVVLQQKTA QSNRTSATQG ATNGFESFAA KSPAFKPRAN KPKTGSTTSA ARQRPPPPPQ RPPPHHQAPA
201: PAPPPAMKDT FWTSCNKCKM NFEYLRVYIN HTLLCPSCRD PFLAKEVPVP PTEDVHAGRG SNISGAPQDA STRRNFQWGP FSRAAGAASA TASSSAAAQA
301: ANVVHQTYEK VKREREEAQA VARREEAFQR KHNPLKRQAD VSMNHGMGDT AFGKKMRTDA GVGSSIPSGP WAQFARMPVG TIPFSTNSAF EFQIVNGVPT
401: WKPRPVTRLS VTKIFSKSDL KRILVDKVKS DLKEKLSEIR SRSIQVTVDG PASKKYVEVS KATVDSTAKK DVCVDPEENG SANSNGSDDS TAAGNEDEDP
501: MSYTVPDPDF HDFDKDRTEE CFQSDQIWAS YDDDDGMPRF YTFIQKVISL NPFKVKISYL ESKTNSEFGP LSWVSSGFAK TCGDFRIAKH EICDVVNMFS
601: HQIKWEKGPR GMVNVYPREG DIWALYRNWS PEWDGDTPDN VLHVYDLVEV LDDYDEDHGI SVIPLVKVTG FRTVFQRHQN RNVIKRIPKE EMFRFSHQVP
701: FYRLSGEEAP NVPKDSYEVD PAAIPKELLQ GITETAEEAE GTSKSS
101: VGAEGAFQLV KEAWTVLSDK TKRLLYDQKR KVVVLQQKTA QSNRTSATQG ATNGFESFAA KSPAFKPRAN KPKTGSTTSA ARQRPPPPPQ RPPPHHQAPA
201: PAPPPAMKDT FWTSCNKCKM NFEYLRVYIN HTLLCPSCRD PFLAKEVPVP PTEDVHAGRG SNISGAPQDA STRRNFQWGP FSRAAGAASA TASSSAAAQA
301: ANVVHQTYEK VKREREEAQA VARREEAFQR KHNPLKRQAD VSMNHGMGDT AFGKKMRTDA GVGSSIPSGP WAQFARMPVG TIPFSTNSAF EFQIVNGVPT
401: WKPRPVTRLS VTKIFSKSDL KRILVDKVKS DLKEKLSEIR SRSIQVTVDG PASKKYVEVS KATVDSTAKK DVCVDPEENG SANSNGSDDS TAAGNEDEDP
501: MSYTVPDPDF HDFDKDRTEE CFQSDQIWAS YDDDDGMPRF YTFIQKVISL NPFKVKISYL ESKTNSEFGP LSWVSSGFAK TCGDFRIAKH EICDVVNMFS
601: HQIKWEKGPR GMVNVYPREG DIWALYRNWS PEWDGDTPDN VLHVYDLVEV LDDYDEDHGI SVIPLVKVTG FRTVFQRHQN RNVIKRIPKE EMFRFSHQVP
701: FYRLSGEEAP NVPKDSYEVD PAAIPKELLQ GITETAEEAE GTSKSS
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.