Factsheet for Solyc01g044270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059130	Potato	cytosol	92.29	92.29
VIT_01s0010g03770.t01	Wine grape	cytosol	17.99	57.85
GSMUA_Achr8P00660_001	Banana	cytosol	37.92	49.0
Solyc03g007280.2.1	Tomato	cytosol	12.21	48.72
Solyc03g019630.1.1	Tomato	nucleus	9.51	47.44
VIT_01s0010g03760.t01	Wine grape	cytosol	49.36	47.0
KRH09248	Soybean	nucleus	46.66	46.6
KRH38748	Soybean	nucleus	46.66	44.7
GSMUA_Achr10P...	Banana	cytosol	34.7	44.05
GSMUA_Achr2P21160_001	Banana	cytosol	30.08	43.49
GSMUA_Achr11P...	Banana	cytosol	28.02	43.43
TraesCS2D01G283100.2	Wheat	cytosol	38.69	41.06
Os03t0401200-01	Rice	cytosol	39.46	41.04
TraesCS2A01G284200.2	Wheat	cytosol	38.56	40.93
Zm00001d003948_P001	Maize	cytosol	38.69	40.9
TraesCS2B01G301100.1	Wheat	cytosol	37.02	40.79
Os02t0510000-01	Rice	cytosol	38.43	40.74
TraesCS3B01G607500.1	Wheat	cytosol	38.82	40.7
EES10633	Sorghum	cytosol	38.43	40.68
TraesCS3A01G536400.1	Wheat	cytosol	38.69	40.57
GSMUA_Achr3P02570_001	Banana	nucleus	27.25	40.54
TraesCS3D01G541800.1	Wheat	cytosol	38.69	40.35
OQU85000	Sorghum	cytosol	37.53	40.11
Zm00001d025238_P001	Maize	cytosol	37.66	39.92
Zm00001d025585_P001	Maize	cytosol	37.4	39.7
Zm00001d025584_P001	Maize	cytosol	37.4	39.7
EES07899	Sorghum	cytosol	37.4	39.59
TraesCS5A01G493100.1	Wheat	cytosol	38.17	39.03
EES10933	Sorghum	cytosol	36.12	38.81
GSMUA_Achr6P12230_001	Banana	nucleus	28.79	38.62
TraesCS4D01G315600.1	Wheat	cytosol	37.4	38.24
Zm00001d050565_P001	Maize	cytosol	31.49	38.04
Os04t0388800-01	Rice	nucleus	28.92	37.63
TraesCS4B01G319100.1	Wheat	cytosol	34.32	37.5
Os01t0923800-01	Rice	nucleus	33.03	34.54
TraesCS3B01G470100.1	Wheat	nucleus	30.08	32.23
Solyc05g040050.1.1	Tomato	nucleus	32.39	32.18
Solyc07g047690.1.1	Tomato	nucleus	32.26	31.85
Solyc03g019640.1.1	Tomato	nucleus	36.5	30.57
TraesCS3A01G435100.1	Wheat	nucleus	30.98	30.47
Zm00001d011997_P001	Maize	nucleus	31.36	29.68
KXG34016	Sorghum	nucleus	31.49	29.55
Solyc01g057670.1.1	Tomato	mitochondrion	5.14	28.57
Solyc10g007630.1.1	Tomato	cytosol	15.94	25.51
Solyc08g029220.1.1	Tomato	nucleus	24.94	24.59
Solyc01g057650.1.1	Tomato	cytosol	5.01	22.81
Solyc01g098310.1.1	Tomato	cytosol	13.11	22.37
Solyc01g067780.1.1	Tomato	cytosol	24.94	21.48
Solyc01g065570.2.1	Tomato	cytosol	6.17	20.17
Solyc01g098250.2.1	Tomato	nucleus	24.94	19.54
Solyc08g005300.1.1	Tomato	nucleus	21.21	18.09
Solyc01g057750.1.1	Tomato	cytosol	13.75	17.26
Solyc01g098330.1.1	Tomato	nucleus	9.0	17.07
Solyc07g039220.1.1	Tomato	cytosol	7.46	16.43
Solyc01g098340.2.1	Tomato	cytosol	12.6	12.25
Solyc01g067770.1.1	Tomato	extracellular, vacuole	2.44	6.96

Protein Annotations

EnsemblPlants:Solyc01g044270.2.1	EnsemblPlantsGene:Solyc01g044270.2	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44137	PANTHER:PTHR44137:SF4
PFAM:PF00226	PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002763159	UniProt:K4AVB0	MapMan:35.2	:

Description

No Description!

Coordinates

chr1:+:43096813..43099927

Molecular Weight (calculated)

87197.9 Da

IEP (calculated)

8.658

GRAVY (calculated)

-0.731

Length

778 amino acids

Sequence
(BLAST)

001: MECNKDDALR AKEIAESKFL DKDFLGAKRF ALKAQSLNPG LEGISQMLAT LGVHIAAENK VNGEGNFYGI LGVSPKADDE AIRKQYRKLA LMLHPDKNKS
101: IGAEAAFKHV SEAWSLLSDK NKKTVYDNRN ASVLQQRVRA ENVDSSQQSK QNGFHKFAKN AASRARPPKS STSKKSSSSG TKDRGTFWTV CYRCKMQYEY
201: MRMYLNHNLL CPNCHEAFFA VETTAPSNGS KKSTEWDYSQ QQENTYHQGM RKGAPVTGRN SSSAPNFVSS VVNNTTSPDH NNFQWSPFSQ TAGHASAAQA
301: ANMVQQVYQK VKRERQEAQT ATKREEALKR KNHSSKRPSA ALSAGQFNAF KRKKGINDPS TSRLRHSWES DGGSTASPAD VGRGNGERVK LNVVNQLGNE
401: REASYNDVKH LLMEKAKKEI LKNLSKRGSA TSTTSISSRG VILTKEAKER KNEEYHVSEF DVREDHDAAR EQFITETKVF ANRSSSETFD NYLDNESAGC
501: MLIDVTESDF HNFDSDRTES CFGPNQVWAA YDDSDGMPRY YALILEVVSL NPFKVRVSWL NSNNSGTCSL NSVNSGAPKT CGDFRRGRHE IRTSINCFSH
601: KVRWTKGLGD TIQIFPRKGQ IWALYRNWSS EWNEFTGDDV VQKYDLIEVL EDFNEEVVVV TPLVKVAGFK SVFHKHLNPE EIRKIPKEEI FRFSHEISSF
701: LLTGNEAPNA PKGLRELDPA AMPGKLLEVI QDVEEIECMD SKGSREGNAI GGTKARSSSL MEETYISMED KEVVILDS

Best Arabidopsis Sequence Match ( AT5G53150.3 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.