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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH53452 Soybean cytosol 94.8 94.8
KRH18160 Soybean nucleus 73.99 66.41
KRH16532 Soybean cytosol 72.98 65.58
Solyc03g007280.2.1 Tomato cytosol 16.04 56.92
VIT_16s0050g02590.t01 Wine grape cytosol 58.53 54.51
PGSC0003DMT400023514 Potato cytosol 54.91 51.7
GSMUA_Achr8P00660_001 Banana cytosol 44.22 50.83
GSMUA_Achr11P... Banana cytosol 34.68 47.81
GSMUA_Achr10P... Banana cytosol 41.91 47.31
CDY49460 Canola nucleus 43.93 46.63
CDY19683 Canola cytosol 46.68 46.61
Bra003079.1-P Field mustard cytosol 46.97 45.84
GSMUA_Achr2P21160_001 Banana cytosol 34.97 44.98
KRG89459 Soybean cytosol 6.94 44.04
TraesCS2A01G284200.2 Wheat cytosol 46.1 43.52
TraesCS2D01G283100.2 Wheat cytosol 46.1 43.52
Os03t0401200-01 Rice cytosol 46.82 43.32
TraesCS3D01G541800.1 Wheat cytosol 46.53 43.16
TraesCS3B01G607500.1 Wheat cytosol 46.1 42.99
Zm00001d025238_P001 Maize cytosol 45.52 42.92
AT5G53150.3 Thale cress cytosol 46.82 42.91
TraesCS3A01G536400.1 Wheat cytosol 45.95 42.86
GSMUA_Achr6P12230_001 Banana nucleus 35.84 42.76
KRH09248 Soybean nucleus 48.12 42.75
EES10633 Sorghum cytosol 45.38 42.72
TraesCS2B01G301100.1 Wheat cytosol 43.5 42.63
Zm00001d003948_P001 Maize cytosol 45.09 42.39
EES07899 Sorghum cytosol 44.94 42.31
Zm00001d025584_P001 Maize cytosol 44.8 42.29
GSMUA_Achr3P02570_001 Banana nucleus 31.94 42.26
Os02t0510000-01 Rice cytosol 44.8 42.23
Zm00001d025585_P001 Maize cytosol 44.65 42.16
KRH38748 Soybean nucleus 49.28 42.0
OQU85000 Sorghum cytosol 43.93 41.76
TraesCS4D01G315600.1 Wheat cytosol 45.81 41.66
Zm00001d050565_P001 Maize cytosol 38.73 41.61
TraesCS5A01G493100.1 Wheat cytosol 45.66 41.52
Os04t0388800-01 Rice nucleus 34.83 40.3
EES10933 Sorghum cytosol 42.05 40.19
KRH54176 Soybean nucleus 45.38 39.6
KRH63773 Soybean nucleus 45.09 38.38
TraesCS4B01G319100.1 Wheat cytosol 39.31 38.2
KRH73997 Soybean nucleus 38.15 37.45
KRH14137 Soybean nucleus 38.15 37.34
TraesCS3B01G470100.1 Wheat nucleus 36.99 35.26
Os01t0923800-01 Rice nucleus 36.56 34.01
TraesCS3A01G435100.1 Wheat nucleus 37.57 32.87
KRH74334 Soybean cytosol, nucleus 24.57 30.3
Zm00001d011997_P001 Maize nucleus 35.55 29.93
KXG34016 Sorghum nucleus 35.84 29.92
KRH39596 Soybean nucleus 25.0 29.88
KRH34003 Soybean cytosol 11.56 27.49
KRH37055 Soybean cytosol 10.69 27.41
KRH34004 Soybean cytosol 12.43 27.04
KRH12028 Soybean cytosol 10.4 26.67
KRH50796 Soybean cytosol, nucleus, peroxisome 9.25 25.7
KRG92798 Soybean cytosol 26.3 25.67
KRH02299 Soybean cytosol 9.68 25.0
KRH11282 Soybean nucleus 29.19 20.87
KRH50936 Soybean nucleus 28.32 20.46
KRH21004 Soybean nucleus 28.61 20.45
KRH68628 Soybean cytosol 29.19 18.93
KRG96896 Soybean cytosol 28.9 18.9
KRH02180 Soybean cytosol, nucleus, plastid 27.6 18.3
Protein Annotations
Gene3D:1.10.287.110EntrezGene:100818585MapMan:35.2UniProt:A0A0R0KC15EMBL:ACUP02002766InterPro:DUF3444
InterPro:DnaJ_domainInterPro:DnaJ_domain_CSEnsemblPlantsGene:GLYMA_04G237600InterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sf
EnsemblPlants:KRH64496ProteinID:KRH64496ProteinID:KRH64496.1PFAM:PF00226PFAM:PF11926PRINTS:PR00625
ScanProsite:PS00636PFscan:PS50076PANTHER:PTHR44137PANTHER:PTHR44137:SF5SMART:SM00271SUPFAM:SSF46565
UniParc:UPI00023C0523SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:+:50613451..50619006
Molecular Weight (calculated)
79132.9 Da
IEP (calculated)
8.943
GRAVY (calculated)
-0.837
Length
692 amino acids
Sequence
(BLAST)
001: MMECNKDEAV RAKEIAERKF SEREYVGAKK FALKAQNLYP ELEDITQLLT TIDIYTSAEN KVSGEMDWYG ILGVSPFADE ETVRKQYRKL ALTLHPDKNK
101: SLGAEGAFKL VSEAWSLLSD KTKRLEYNQK RSLKGFQHNT PNHVGSQPEA PSSNGYYNLK KNVNSNVRTG NNSGRAPSAP VKKAETFWTI CNRCRTHYEY
201: LRVYLNHTLL CPNCNEAFVA VERGPPPNVF KPPNWSSHQR HQNSQHHAGS NNTNFQWGSH SRMAGFGSTD GSTSVAAQAA SVVQQASEKV RREGSFHKPM
301: KKRKTDDIRI NGYQGYMANH MATRDGAAGL GTFSEPGKVN LETERNYGFS GLPGKHYSTR ELSMFEIRNM LMDKSRIEIR KKLQEWKSMA EAKINKDKEN
401: KRQKSTFNGK TTGSEKLRET AVNGNRHLDI DSFPVRSDDT VKKNQAYVTI TVPDPDFHNF DLDRDENSFA EDQVWAAYDD DDGMPRYYAR IHKVISMKPF
501: KMRISWLNSR SNSELGPIDW VGSGFYKTCG DFRTGKHEIT ESLNSFSHKV RWTKGTRGVV RIFPGKGEVW ALYRNWSRDW NEHTPDEVIH KYDMVEVLED
601: FNEEQGILVT PLVKVAGFRT VFQRHMDRDR ERMIPKEEMF QFSHQVPNYL LTGQEADNAP KDCRELDPAA TPLDLLQIIT EANETSKNAL EA
Best Arabidopsis Sequence Match ( AT5G53150.3 )
(BLAST)
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.