CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37055	Soybean	cytosol	88.15	88.15
KRH50796	Soybean	cytosol, nucleus, peroxisome	61.85	67.07
KRH02299	Soybean	cytosol	65.56	66.04
CDY08035	Canola	cytosol	18.15	49.49
CDX74082	Canola	cytosol	35.56	42.48
CDY34931	Canola	cytosol	35.19	42.22
Bra001216.1-P	Field mustard	cytosol	35.19	42.04
VIT_05s0077g01780.t01	Wine grape	nucleus	32.96	40.83
GSMUA_Achr3P24140_001	Banana	nucleus	34.44	40.43
AT3G06778.1	Thale cress	cytosol	34.07	40.17
GSMUA_Achr1P24750_001	Banana	cytosol	33.7	36.99
Bra040290.1-P	Field mustard	cytosol, mitochondrion	24.81	36.81
Solyc01g065570.2.1	Tomato	cytosol	31.11	35.29
HORVU5Hr1G116070.3	Barley	cytosol	31.85	33.59
PGSC0003DMT400003010	Potato	nucleus	31.11	33.07
Os03t0831000-00	Rice	plastid	31.48	32.69
TraesCS5B01G508500.1	Wheat	cytosol	32.22	31.64
TraesCS4A01G365000.1	Wheat	cytosol	31.11	30.88
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	7.41	30.77
KRG89459	Soybean	cytosol	12.22	30.28
KXG37199	Sorghum	cytosol	29.26	28.83
Zm00001d034749_P001	Maize	plastid	30.0	28.83
TraesCS5D01G508400.1	Wheat	plastid	31.85	24.09
KRH34004	Soybean	cytosol	18.15	15.41
KRH34003	Soybean	cytosol	15.19	14.09
KRH53452	Soybean	cytosol	26.67	10.4
KRH64496	Soybean	nucleus	26.67	10.4
KRH39596	Soybean	nucleus	21.85	10.19
KRH74334	Soybean	cytosol, nucleus	21.11	10.16
KRH16532	Soybean	cytosol	27.41	9.61
KRH18160	Soybean	nucleus	27.41	9.6
KRG92798	Soybean	cytosol	24.44	9.31
KRH73997	Soybean	nucleus	24.07	9.22
KRH09248	Soybean	nucleus	26.3	9.11
KRH14137	Soybean	nucleus	23.33	8.91
KRH38748	Soybean	nucleus	25.93	8.62
KRH54176	Soybean	nucleus	24.07	8.2
KRH63773	Soybean	nucleus	24.44	8.12
KRH50936	Soybean	nucleus	28.15	7.93
KRH11282	Soybean	nucleus	26.67	7.44
KRH21004	Soybean	nucleus	26.3	7.33
KRH02180	Soybean	cytosol, nucleus, plastid	27.04	6.99
KRH68628	Soybean	cytosol	26.3	6.65
KRG96896	Soybean	cytosol	25.93	6.62

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100778573	MapMan:35.2	EMBL:ACUP02009259	ncoils:Coil	InterPro:DnaJ_domain
EnsemblPlantsGene:GLYMA_15G146900	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K7MBD3	EnsemblPlants:KRH12028
ProteinID:KRH12028	ProteinID:KRH12028.1	PFAM:PF00226	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR45089
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000233B1A7	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:12108503..12110387

Molecular Weight (calculated)

31559.7 Da

IEP (calculated)

9.941

GRAVY (calculated)

-0.726

Length

270 amino acids

Sequence
(BLAST)

001: MGQESDYKTQ LVLEVCSIST RSVVCVHRHV SNHHVKPPFI DWYCILGVEE NAGVSTIRKQ YHKLALQLHP DKNTHPKAEI AFKLVSEACI CLSDAAKRKA
101: FDLKRHKNFC FECNRIPYTS KRVPNNSNGS SFKTWNIIWD SRSYKVWRNI RDMKDRLKEE AKVIENCLRK NSMAKKESPL YNPDDYRHGS SFKHKVEREI
201: PVFNPLKNLH KGYPHLRGNV YKNSETCWWY LHTQNLVHND KGEAKYASPV FEVRSQRSML STSKFAYVPS

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.