Factsheet for Zm00001d034749_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37199	Sorghum	cytosol	78.29	80.29
Os03t0831000-00	Rice	plastid	54.8	59.23
TraesCS4A01G365000.1	Wheat	cytosol	55.87	57.72
HORVU5Hr1G116070.3	Barley	cytosol	51.96	57.03
TraesCS5B01G508500.1	Wheat	cytosol	54.8	56.0
GSMUA_Achr3P24140_001	Banana	nucleus	36.65	44.78
TraesCS5D01G508400.1	Wheat	plastid	56.58	44.54
GSMUA_Achr1P24750_001	Banana	cytosol	34.52	39.43
CDY08035	Canola	cytosol	12.81	36.36
KRH50796	Soybean	cytosol, nucleus, peroxisome	29.18	32.93
KRH02299	Soybean	cytosol	29.89	31.34
CDY34931	Canola	cytosol	24.56	30.67
AT3G06778.1	Thale cress	cytosol	24.91	30.57
KRH37055	Soybean	cytosol	29.18	30.37
KRH12028	Soybean	cytosol	28.83	30.0
CDX74082	Canola	cytosol	23.84	29.65
Bra040290.1-P	Field mustard	cytosol, mitochondrion	18.86	29.12
Solyc01g065570.2.1	Tomato	cytosol	24.56	28.99
Bra001216.1-P	Field mustard	cytosol	23.13	28.76
PGSC0003DMT400003010	Potato	nucleus	25.27	27.95
VIT_05s0077g01780.t01	Wine grape	nucleus	20.28	26.15
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	4.63	20.0
Zm00001d025238_P001	Maize	cytosol	18.51	7.08
Zm00001d003948_P001	Maize	cytosol	18.51	7.07
Zm00001d050565_P001	Maize	cytosol	14.23	6.21
Zm00001d045553_P001	Maize	cytosol	10.32	6.09
Zm00001d025584_P001	Maize	cytosol	15.3	5.87
Zm00001d025585_P001	Maize	cytosol	14.95	5.73
Zm00001d011997_P001	Maize	nucleus	16.37	5.6
Zm00001d008412_P001	Maize	cytosol	19.93	5.5
Zm00001d040846_P001	Maize	cytosol	17.79	5.34
Zm00001d008413_P001	Maize	cytosol	19.22	5.3
Zm00001d019461_P002	Maize	cytosol	19.93	5.02
Zm00001d042269_P001	Maize	cytosol	12.81	4.72
Zm00001d052947_P001	Maize	plastid	4.63	1.5

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	UniProt:A0A1D6LAI2	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ProteinID:ONM11136.1	PFAM:PF00226	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0008442501	EnsemblPlantsGene:Zm00001d034749	EnsemblPlants:Zm00001d034749_P001
EnsemblPlants:Zm00001d034749_T001	SEG:seg	:	:	:	:

Description

DnaJ domain containing protein

Coordinates

chr1:+:301292516..301293945

Molecular Weight (calculated)

31828.6 Da

IEP (calculated)

11.537

GRAVY (calculated)

-0.710

Length

281 amino acids

Sequence
(BLAST)

001: MVGAGAATDA ARALAAREVC AASAAFASCT HRRRRRSSPR GPHFVDWYLV LSVSTSFHSR RRRRLPPIHS PILTRTCSWR RAQIGEAASE DAVRRRYRQL
101: ALQLHPDKNR HPKAEVAFKI VSEAHACLTD QARRRAFDLE RRGSFCAACH DRYAARWSQP ASGHQAPAPA ASRSKAARET IQSRLRDECR VIDGCLRAND
201: AAACARRRQS FPLFDPSDGR RFPDYPHVRP PPFELRHSED WLGRAAVDRQ ALNRRWCRGG GESPVYQIRT VATECTDRRA W

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.